Experiment: dichromate 20 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_00545 and IAI46_00550 are separated by 295 nucleotides IAI46_00550 and IAI46_00555 are separated by 279 nucleotides
IAI46_00545: IAI46_00545 - biofilm formation regulator HmsP, at 126,804 to 128,810
_00545
IAI46_00550: IAI46_00550 - dicarboxylate/amino acid:cation symporter, at 129,106 to 130,395
_00550
IAI46_00555: IAI46_00555 - insulinase family protein, at 130,675 to 132,168
_00555
Position (kb) 129
130
131 Strain fitness (log2 ratio) -2
-1
0
1
2 at 128.116 kb on + strand, within IAI46_00545 at 128.116 kb on + strand, within IAI46_00545 at 128.116 kb on + strand, within IAI46_00545 at 128.117 kb on - strand, within IAI46_00545 at 128.117 kb on - strand, within IAI46_00545 at 128.120 kb on + strand, within IAI46_00545 at 128.120 kb on + strand, within IAI46_00545 at 128.120 kb on + strand, within IAI46_00545 at 128.120 kb on + strand, within IAI46_00545 at 128.120 kb on + strand, within IAI46_00545 at 128.120 kb on + strand, within IAI46_00545 at 128.120 kb on + strand, within IAI46_00545 at 128.120 kb on + strand, within IAI46_00545 at 128.120 kb on + strand, within IAI46_00545 at 128.120 kb on + strand, within IAI46_00545 at 128.120 kb on + strand, within IAI46_00545 at 128.121 kb on - strand, within IAI46_00545 at 128.121 kb on - strand, within IAI46_00545 at 128.121 kb on - strand, within IAI46_00545 at 128.121 kb on - strand, within IAI46_00545 at 128.121 kb on - strand, within IAI46_00545 at 128.121 kb on - strand, within IAI46_00545 at 128.156 kb on - strand, within IAI46_00545 at 128.156 kb on - strand, within IAI46_00545 at 128.156 kb on - strand, within IAI46_00545 at 128.156 kb on - strand, within IAI46_00545 at 128.173 kb on - strand, within IAI46_00545 at 128.173 kb on - strand, within IAI46_00545 at 128.187 kb on - strand, within IAI46_00545 at 128.187 kb on - strand, within IAI46_00545 at 128.187 kb on - strand, within IAI46_00545 at 128.187 kb on - strand, within IAI46_00545 at 128.247 kb on - strand, within IAI46_00545 at 128.320 kb on + strand, within IAI46_00545 at 128.526 kb on + strand, within IAI46_00545 at 128.541 kb on + strand, within IAI46_00545 at 128.542 kb on - strand, within IAI46_00545 at 128.597 kb on + strand, within IAI46_00545 at 128.598 kb on - strand, within IAI46_00545 at 128.598 kb on - strand, within IAI46_00545 at 128.598 kb on - strand, within IAI46_00545 at 128.726 kb on + strand at 128.726 kb on + strand at 128.727 kb on - strand at 128.727 kb on - strand at 128.733 kb on - strand at 128.875 kb on + strand at 128.885 kb on + strand at 128.885 kb on + strand at 128.889 kb on + strand at 128.921 kb on - strand at 128.966 kb on - strand at 128.983 kb on + strand at 128.983 kb on + strand at 128.983 kb on + strand at 128.983 kb on + strand at 128.983 kb on + strand at 128.983 kb on + strand at 128.983 kb on + strand at 128.983 kb on + strand at 128.984 kb on - strand at 128.984 kb on - strand at 128.984 kb on - strand at 128.987 kb on + strand at 128.987 kb on + strand at 128.988 kb on - strand at 128.988 kb on - strand at 128.988 kb on - strand at 128.988 kb on - strand at 128.988 kb on - strand at 129.017 kb on + strand at 129.018 kb on - strand at 129.060 kb on - strand at 129.065 kb on + strand at 129.105 kb on + strand at 129.106 kb on - strand at 129.106 kb on - strand at 129.117 kb on + strand at 129.117 kb on + strand at 129.117 kb on + strand at 129.123 kb on + strand at 129.134 kb on - strand at 129.156 kb on + strand at 129.157 kb on - strand at 129.241 kb on - strand, within IAI46_00550 at 129.271 kb on - strand, within IAI46_00550 at 129.343 kb on + strand, within IAI46_00550 at 129.343 kb on + strand, within IAI46_00550 at 129.344 kb on - strand, within IAI46_00550 at 129.510 kb on + strand, within IAI46_00550 at 129.669 kb on + strand, within IAI46_00550 at 129.669 kb on + strand, within IAI46_00550 at 129.669 kb on + strand, within IAI46_00550 at 129.681 kb on + strand, within IAI46_00550 at 129.682 kb on - strand, within IAI46_00550 at 129.732 kb on + strand, within IAI46_00550 at 129.732 kb on + strand, within IAI46_00550 at 129.732 kb on + strand, within IAI46_00550 at 129.736 kb on + strand, within IAI46_00550 at 129.736 kb on + strand, within IAI46_00550 at 129.736 kb on + strand, within IAI46_00550 at 129.736 kb on + strand, within IAI46_00550 at 129.737 kb on - strand, within IAI46_00550 at 129.784 kb on + strand, within IAI46_00550 at 129.784 kb on + strand, within IAI46_00550 at 129.784 kb on + strand, within IAI46_00550 at 129.784 kb on + strand, within IAI46_00550 at 129.785 kb on - strand, within IAI46_00550 at 129.785 kb on - strand, within IAI46_00550 at 129.785 kb on - strand, within IAI46_00550 at 129.785 kb on - strand, within IAI46_00550 at 129.785 kb on - strand, within IAI46_00550 at 129.785 kb on - strand, within IAI46_00550 at 129.785 kb on - strand, within IAI46_00550 at 129.785 kb on - strand, within IAI46_00550 at 129.785 kb on - strand, within IAI46_00550 at 129.785 kb on - strand, within IAI46_00550 at 129.785 kb on - strand, within IAI46_00550 at 129.787 kb on - strand, within IAI46_00550 at 129.868 kb on + strand, within IAI46_00550 at 129.869 kb on - strand, within IAI46_00550 at 129.872 kb on + strand, within IAI46_00550 at 129.872 kb on + strand, within IAI46_00550 at 129.873 kb on - strand, within IAI46_00550 at 129.873 kb on - strand, within IAI46_00550 at 129.960 kb on + strand, within IAI46_00550 at 129.997 kb on + strand, within IAI46_00550 at 129.998 kb on - strand, within IAI46_00550 at 130.027 kb on + strand, within IAI46_00550 at 130.074 kb on + strand, within IAI46_00550 at 130.075 kb on - strand, within IAI46_00550 at 130.302 kb on + strand at 130.398 kb on + strand at 130.399 kb on - strand at 130.441 kb on - strand at 130.480 kb on + strand at 130.481 kb on - strand at 130.499 kb on + strand at 130.587 kb on + strand at 130.587 kb on + strand at 130.588 kb on - strand at 130.606 kb on + strand at 130.606 kb on + strand at 130.606 kb on + strand at 130.606 kb on + strand at 130.607 kb on - strand at 130.607 kb on - strand at 130.609 kb on + strand at 130.653 kb on + strand at 130.654 kb on - strand at 130.660 kb on + strand at 130.660 kb on + strand at 130.661 kb on - strand at 130.661 kb on - strand at 130.661 kb on - strand at 130.661 kb on - strand at 130.661 kb on - strand at 130.665 kb on - strand at 130.703 kb on + strand at 130.703 kb on + strand at 130.704 kb on - strand at 130.704 kb on - strand at 130.704 kb on - strand at 130.704 kb on - strand at 130.704 kb on - strand at 130.811 kb on + strand at 130.811 kb on + strand at 130.818 kb on + strand at 130.845 kb on - strand, within IAI46_00555 at 130.863 kb on + strand, within IAI46_00555 at 130.864 kb on - strand, within IAI46_00555 at 130.866 kb on + strand, within IAI46_00555 at 130.867 kb on - strand, within IAI46_00555 at 131.026 kb on + strand, within IAI46_00555 at 131.027 kb on - strand, within IAI46_00555 at 131.027 kb on - strand, within IAI46_00555 at 131.041 kb on + strand, within IAI46_00555 at 131.041 kb on + strand, within IAI46_00555 at 131.041 kb on + strand, within IAI46_00555 at 131.041 kb on + strand, within IAI46_00555 at 131.041 kb on + strand, within IAI46_00555 at 131.041 kb on + strand, within IAI46_00555 at 131.042 kb on - strand, within IAI46_00555 at 131.042 kb on - strand, within IAI46_00555 at 131.044 kb on - strand, within IAI46_00555 at 131.044 kb on - strand, within IAI46_00555 at 131.044 kb on - strand, within IAI46_00555 at 131.136 kb on + strand, within IAI46_00555 at 131.151 kb on - strand, within IAI46_00555 at 131.314 kb on + strand, within IAI46_00555 at 131.314 kb on + strand, within IAI46_00555 at 131.314 kb on + strand, within IAI46_00555 at 131.315 kb on - strand, within IAI46_00555 at 131.315 kb on - strand, within IAI46_00555 at 131.315 kb on - strand, within IAI46_00555 at 131.315 kb on - strand, within IAI46_00555 at 131.316 kb on + strand, within IAI46_00555 at 131.317 kb on - strand, within IAI46_00555 at 131.338 kb on + strand, within IAI46_00555 at 131.338 kb on + strand, within IAI46_00555 at 131.339 kb on - strand, within IAI46_00555 at 131.339 kb on - strand, within IAI46_00555 at 131.339 kb on - strand, within IAI46_00555 at 131.354 kb on + strand, within IAI46_00555 at 131.354 kb on + strand, within IAI46_00555
Per-strain Table
Position Strand Gene LocusTag Fraction dichromate 20 uM, anaerobic remove 128,116 + IAI46_00545 0.65 +0.5 128,116 + IAI46_00545 0.65 +0.1 128,116 + IAI46_00545 0.65 -0.1 128,117 - IAI46_00545 0.65 +0.5 128,117 - IAI46_00545 0.65 -0.4 128,120 + IAI46_00545 0.66 -0.7 128,120 + IAI46_00545 0.66 -0.7 128,120 + IAI46_00545 0.66 -0.1 128,120 + IAI46_00545 0.66 +0.3 128,120 + IAI46_00545 0.66 +0.1 128,120 + IAI46_00545 0.66 -0.7 128,120 + IAI46_00545 0.66 +0.3 128,120 + IAI46_00545 0.66 +1.5 128,120 + IAI46_00545 0.66 -0.7 128,120 + IAI46_00545 0.66 +0.7 128,120 + IAI46_00545 0.66 +0.7 128,121 - IAI46_00545 0.66 -0.4 128,121 - IAI46_00545 0.66 +1.0 128,121 - IAI46_00545 0.66 -0.4 128,121 - IAI46_00545 0.66 +1.0 128,121 - IAI46_00545 0.66 -0.5 128,121 - IAI46_00545 0.66 -0.9 128,156 - IAI46_00545 0.67 +1.0 128,156 - IAI46_00545 0.67 -0.0 128,156 - IAI46_00545 0.67 +0.4 128,156 - IAI46_00545 0.67 +0.4 128,173 - IAI46_00545 0.68 +0.1 128,173 - IAI46_00545 0.68 +0.0 128,187 - IAI46_00545 0.69 +0.1 128,187 - IAI46_00545 0.69 +0.5 128,187 - IAI46_00545 0.69 +0.3 128,187 - IAI46_00545 0.69 -0.6 128,247 - IAI46_00545 0.72 -0.3 128,320 + IAI46_00545 0.76 +0.6 128,526 + IAI46_00545 0.86 +0.2 128,541 + IAI46_00545 0.87 +1.1 128,542 - IAI46_00545 0.87 +0.1 128,597 + IAI46_00545 0.89 +0.6 128,598 - IAI46_00545 0.89 +0.5 128,598 - IAI46_00545 0.89 +0.3 128,598 - IAI46_00545 0.89 -1.4 128,726 + +0.0 128,726 + -0.7 128,727 - -0.7 128,727 - +1.0 128,733 - +2.0 128,875 + -1.3 128,885 + +0.0 128,885 + +0.1 128,889 + -0.2 128,921 - -0.5 128,966 - -1.0 128,983 + +0.3 128,983 + +0.2 128,983 + +0.4 128,983 + -0.3 128,983 + -0.7 128,983 + -0.2 128,983 + -0.1 128,983 + -0.0 128,984 - +0.2 128,984 - +0.2 128,984 - -0.3 128,987 + +0.2 128,987 + -0.4 128,988 - -1.3 128,988 - +0.3 128,988 - -0.4 128,988 - -0.6 128,988 - +0.2 129,017 + +0.5 129,018 - +0.9 129,060 - +0.1 129,065 + +0.7 129,105 + -0.2 129,106 - +1.3 129,106 - +1.0 129,117 + -0.8 129,117 + +0.6 129,117 + +0.7 129,123 + +0.3 129,134 - +0.7 129,156 + +0.0 129,157 - +0.7 129,241 - IAI46_00550 0.10 -0.6 129,271 - IAI46_00550 0.13 +0.0 129,343 + IAI46_00550 0.18 +1.0 129,343 + IAI46_00550 0.18 +0.1 129,344 - IAI46_00550 0.18 -0.2 129,510 + IAI46_00550 0.31 -0.7 129,669 + IAI46_00550 0.44 -0.3 129,669 + IAI46_00550 0.44 -0.8 129,669 + IAI46_00550 0.44 -0.4 129,681 + IAI46_00550 0.45 -0.2 129,682 - IAI46_00550 0.45 -0.5 129,732 + IAI46_00550 0.49 +0.8 129,732 + IAI46_00550 0.49 -0.2 129,732 + IAI46_00550 0.49 +0.2 129,736 + IAI46_00550 0.49 -0.2 129,736 + IAI46_00550 0.49 +0.3 129,736 + IAI46_00550 0.49 +0.8 129,736 + IAI46_00550 0.49 +0.7 129,737 - IAI46_00550 0.49 -0.2 129,784 + IAI46_00550 0.53 +0.3 129,784 + IAI46_00550 0.53 -0.4 129,784 + IAI46_00550 0.53 +0.3 129,784 + IAI46_00550 0.53 -0.6 129,785 - IAI46_00550 0.53 -0.3 129,785 - IAI46_00550 0.53 -0.7 129,785 - IAI46_00550 0.53 +0.5 129,785 - IAI46_00550 0.53 +0.2 129,785 - IAI46_00550 0.53 +1.4 129,785 - IAI46_00550 0.53 -2.1 129,785 - IAI46_00550 0.53 -0.6 129,785 - IAI46_00550 0.53 +0.3 129,785 - IAI46_00550 0.53 +0.5 129,785 - IAI46_00550 0.53 +0.0 129,785 - IAI46_00550 0.53 -0.4 129,787 - IAI46_00550 0.53 -1.9 129,868 + IAI46_00550 0.59 +0.1 129,869 - IAI46_00550 0.59 +0.1 129,872 + IAI46_00550 0.59 +0.0 129,872 + IAI46_00550 0.59 +0.6 129,873 - IAI46_00550 0.59 +1.5 129,873 - IAI46_00550 0.59 -2.0 129,960 + IAI46_00550 0.66 -0.2 129,997 + IAI46_00550 0.69 -0.1 129,998 - IAI46_00550 0.69 +0.7 130,027 + IAI46_00550 0.71 -0.0 130,074 + IAI46_00550 0.75 -0.4 130,075 - IAI46_00550 0.75 +0.6 130,302 + -1.1 130,398 + +1.4 130,399 - -0.3 130,441 - +0.2 130,480 + +1.0 130,481 - +0.2 130,499 + +0.5 130,587 + -1.9 130,587 + -0.2 130,588 - +1.1 130,606 + -0.3 130,606 + +0.5 130,606 + -0.3 130,606 + -0.3 130,607 - +0.9 130,607 - -1.1 130,609 + +0.7 130,653 + +0.6 130,654 - +0.9 130,660 + +0.1 130,660 + +1.0 130,661 - +0.1 130,661 - +0.6 130,661 - +0.5 130,661 - +1.2 130,661 - +1.0 130,665 - +0.0 130,703 + +0.0 130,703 + +0.6 130,704 - +0.6 130,704 - +0.3 130,704 - -0.6 130,704 - +0.5 130,704 - +1.0 130,811 + +0.7 130,811 + +1.1 130,818 + +1.0 130,845 - IAI46_00555 0.11 +0.6 130,863 + IAI46_00555 0.13 +0.2 130,864 - IAI46_00555 0.13 +0.1 130,866 + IAI46_00555 0.13 -0.9 130,867 - IAI46_00555 0.13 -0.5 131,026 + IAI46_00555 0.23 +0.7 131,027 - IAI46_00555 0.24 -0.9 131,027 - IAI46_00555 0.24 -0.1 131,041 + IAI46_00555 0.24 -0.1 131,041 + IAI46_00555 0.24 +0.5 131,041 + IAI46_00555 0.24 +0.3 131,041 + IAI46_00555 0.24 -0.2 131,041 + IAI46_00555 0.24 +0.2 131,041 + IAI46_00555 0.24 +0.3 131,042 - IAI46_00555 0.25 +0.0 131,042 - IAI46_00555 0.25 +0.3 131,044 - IAI46_00555 0.25 +0.9 131,044 - IAI46_00555 0.25 +0.6 131,044 - IAI46_00555 0.25 +0.8 131,136 + IAI46_00555 0.31 -1.1 131,151 - IAI46_00555 0.32 +0.3 131,314 + IAI46_00555 0.43 +0.4 131,314 + IAI46_00555 0.43 -0.0 131,314 + IAI46_00555 0.43 +0.4 131,315 - IAI46_00555 0.43 +0.2 131,315 - IAI46_00555 0.43 +0.8 131,315 - IAI46_00555 0.43 +0.1 131,315 - IAI46_00555 0.43 +0.6 131,316 + IAI46_00555 0.43 -0.2 131,317 - IAI46_00555 0.43 +0.5 131,338 + IAI46_00555 0.44 +0.8 131,338 + IAI46_00555 0.44 +0.3 131,339 - IAI46_00555 0.44 +0.5 131,339 - IAI46_00555 0.44 +0.8 131,339 - IAI46_00555 0.44 +0.2 131,354 + IAI46_00555 0.45 +0.7 131,354 + IAI46_00555 0.45 -0.2
Or see this region's nucleotide sequence