Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_4499

Experiment: M9 with sucrose; no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_4497 and EX28DRAFT_4498 are separated by 66 nucleotidesEX28DRAFT_4498 and EX28DRAFT_4499 are separated by 13 nucleotidesEX28DRAFT_4499 and EX28DRAFT_4500 overlap by 4 nucleotides EX28DRAFT_4497: EX28DRAFT_4497 - Uncharacterized protein conserved in bacteria, at 64,084 to 65,541 _4497 EX28DRAFT_4498: EX28DRAFT_4498 - ubiquinone/menaquinone biosynthesis methyltransferases, at 65,608 to 66,363 _4498 EX28DRAFT_4499: EX28DRAFT_4499 - Uncharacterized protein conserved in bacteria, at 66,377 to 66,982 _4499 EX28DRAFT_4500: EX28DRAFT_4500 - 2-octaprenylphenol hydroxylase (EC 1.14.13.-), at 66,979 to 68,619 _4500 Position (kb) 66 67Strain fitness (log2 ratio) -1 0 1at 65.388 kb on + strand, within EX28DRAFT_4497at 65.464 kb on - strandat 65.569 kb on + strandat 66.486 kb on + strand, within EX28DRAFT_4499at 66.528 kb on + strand, within EX28DRAFT_4499

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control
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65,388 + EX28DRAFT_4497 0.89 -0.1
65,464 - +0.8
65,569 + +1.6
66,486 + EX28DRAFT_4499 0.18 +0.2
66,528 + EX28DRAFT_4499 0.25 +0.5

Or see this region's nucleotide sequence