Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4414 and EX28DRAFT_4415 are separated by 83 nucleotides EX28DRAFT_4415 and EX28DRAFT_4416 are separated by 12 nucleotides EX28DRAFT_4416 and EX28DRAFT_4417 are separated by 128 nucleotides
EX28DRAFT_4414: EX28DRAFT_4414 - catalase/peroxidase HPI, at 78,517 to 80,697
_4414
EX28DRAFT_4415: EX28DRAFT_4415 - Glycerol dehydrogenase and related enzymes, at 80,781 to 81,884
_4415
EX28DRAFT_4416: EX28DRAFT_4416 - fructose-6-phosphate aldolase, TalC/MipB family, at 81,897 to 82,559
_4416
EX28DRAFT_4417: EX28DRAFT_4417 - Helix-turn-helix domain, at 82,688 to 83,452
_4417
Position (kb) 80
81
82 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 80.493 kb on + strand at 80.493 kb on + strand at 80.494 kb on - strand at 80.575 kb on - strand at 80.605 kb on + strand at 80.605 kb on + strand at 80.606 kb on - strand at 80.606 kb on - strand at 80.733 kb on + strand at 80.734 kb on - strand at 80.778 kb on + strand at 80.783 kb on - strand at 80.839 kb on + strand at 80.879 kb on + strand at 80.879 kb on + strand at 80.880 kb on - strand at 81.006 kb on + strand, within EX28DRAFT_4415 at 81.007 kb on - strand, within EX28DRAFT_4415 at 81.007 kb on - strand, within EX28DRAFT_4415 at 81.076 kb on + strand, within EX28DRAFT_4415 at 81.077 kb on - strand, within EX28DRAFT_4415 at 81.119 kb on + strand, within EX28DRAFT_4415 at 81.119 kb on + strand, within EX28DRAFT_4415 at 81.120 kb on - strand, within EX28DRAFT_4415 at 81.169 kb on + strand, within EX28DRAFT_4415 at 81.170 kb on - strand, within EX28DRAFT_4415 at 81.173 kb on + strand, within EX28DRAFT_4415 at 81.299 kb on + strand, within EX28DRAFT_4415 at 81.426 kb on - strand, within EX28DRAFT_4415 at 81.548 kb on + strand, within EX28DRAFT_4415 at 81.567 kb on - strand, within EX28DRAFT_4415 at 81.603 kb on - strand, within EX28DRAFT_4415 at 81.815 kb on - strand at 81.854 kb on - strand at 81.854 kb on - strand at 81.948 kb on + strand at 81.991 kb on - strand, within EX28DRAFT_4416 at 82.164 kb on + strand, within EX28DRAFT_4416 at 82.168 kb on + strand, within EX28DRAFT_4416 at 82.181 kb on - strand, within EX28DRAFT_4416 at 82.248 kb on + strand, within EX28DRAFT_4416 at 82.520 kb on - strand at 82.571 kb on - strand at 82.589 kb on - strand at 82.595 kb on + strand at 82.596 kb on - strand at 82.728 kb on + strand at 82.776 kb on + strand, within EX28DRAFT_4417 at 82.776 kb on + strand, within EX28DRAFT_4417 at 82.777 kb on - strand, within EX28DRAFT_4417 at 82.777 kb on - strand, within EX28DRAFT_4417 at 82.789 kb on + strand, within EX28DRAFT_4417 at 82.823 kb on - strand, within EX28DRAFT_4417 at 82.823 kb on - strand, within EX28DRAFT_4417 at 82.831 kb on - strand, within EX28DRAFT_4417 at 82.878 kb on + strand, within EX28DRAFT_4417
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 80,493 + +0.2 80,493 + +0.0 80,494 - -0.0 80,575 - -0.1 80,605 + +0.2 80,605 + +0.3 80,606 - +0.1 80,606 - +0.3 80,733 + +0.1 80,734 - +0.3 80,778 + -0.6 80,783 - -0.0 80,839 + -0.3 80,879 + -0.3 80,879 + -0.0 80,880 - -0.1 81,006 + EX28DRAFT_4415 0.20 -0.2 81,007 - EX28DRAFT_4415 0.20 +0.6 81,007 - EX28DRAFT_4415 0.20 -0.0 81,076 + EX28DRAFT_4415 0.27 -0.6 81,077 - EX28DRAFT_4415 0.27 +0.1 81,119 + EX28DRAFT_4415 0.31 -0.6 81,119 + EX28DRAFT_4415 0.31 +0.3 81,120 - EX28DRAFT_4415 0.31 +0.3 81,169 + EX28DRAFT_4415 0.35 -0.1 81,170 - EX28DRAFT_4415 0.35 +1.4 81,173 + EX28DRAFT_4415 0.36 +0.3 81,299 + EX28DRAFT_4415 0.47 -0.2 81,426 - EX28DRAFT_4415 0.58 +0.5 81,548 + EX28DRAFT_4415 0.69 +0.5 81,567 - EX28DRAFT_4415 0.71 +0.9 81,603 - EX28DRAFT_4415 0.74 +0.3 81,815 - -0.8 81,854 - +0.7 81,854 - +0.3 81,948 + +0.4 81,991 - EX28DRAFT_4416 0.14 -1.1 82,164 + EX28DRAFT_4416 0.40 +0.3 82,168 + EX28DRAFT_4416 0.41 -0.0 82,181 - EX28DRAFT_4416 0.43 +0.3 82,248 + EX28DRAFT_4416 0.53 +0.6 82,520 - -0.1 82,571 - +0.3 82,589 - -2.0 82,595 + +0.2 82,596 - +0.2 82,728 + +0.1 82,776 + EX28DRAFT_4417 0.12 -0.6 82,776 + EX28DRAFT_4417 0.12 +0.7 82,777 - EX28DRAFT_4417 0.12 +0.6 82,777 - EX28DRAFT_4417 0.12 -0.7 82,789 + EX28DRAFT_4417 0.13 -2.9 82,823 - EX28DRAFT_4417 0.18 +0.5 82,823 - EX28DRAFT_4417 0.18 -0.1 82,831 - EX28DRAFT_4417 0.19 +0.8 82,878 + EX28DRAFT_4417 0.25 +0.2
Or see this region's nucleotide sequence