Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4365 and EX28DRAFT_4366 overlap by 4 nucleotides EX28DRAFT_4366 and EX28DRAFT_4367 are separated by 88 nucleotides EX28DRAFT_4367 and EX28DRAFT_4368 overlap by 7 nucleotides EX28DRAFT_4368 and EX28DRAFT_4369 overlap by 4 nucleotides
EX28DRAFT_4365: EX28DRAFT_4365 - DNA-binding winged-HTH domains, at 32,710 to 33,453
_4365
EX28DRAFT_4366: EX28DRAFT_4366 - hypothetical protein, at 33,450 to 33,920
_4366
EX28DRAFT_4367: EX28DRAFT_4367 - haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED, at 34,009 to 34,608
_4367
EX28DRAFT_4368: EX28DRAFT_4368 - Predicted membrane protein, at 34,602 to 35,483
_4368
EX28DRAFT_4369: EX28DRAFT_4369 - D-tyrosyl-tRNA(Tyr) deacylase, at 35,480 to 35,917
_4369
Position (kb) 34
35 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 33.033 kb on - strand, within EX28DRAFT_4365 at 33.080 kb on + strand, within EX28DRAFT_4365 at 33.081 kb on - strand, within EX28DRAFT_4365 at 33.164 kb on + strand, within EX28DRAFT_4365 at 33.167 kb on + strand, within EX28DRAFT_4365 at 33.168 kb on - strand, within EX28DRAFT_4365 at 33.171 kb on - strand, within EX28DRAFT_4365 at 33.172 kb on + strand, within EX28DRAFT_4365 at 33.173 kb on - strand, within EX28DRAFT_4365 at 33.173 kb on - strand, within EX28DRAFT_4365 at 33.174 kb on + strand, within EX28DRAFT_4365 at 33.174 kb on + strand, within EX28DRAFT_4365 at 33.175 kb on - strand, within EX28DRAFT_4365 at 33.175 kb on - strand, within EX28DRAFT_4365 at 33.253 kb on + strand, within EX28DRAFT_4365 at 33.261 kb on + strand, within EX28DRAFT_4365 at 33.283 kb on + strand, within EX28DRAFT_4365 at 33.332 kb on - strand, within EX28DRAFT_4365 at 33.352 kb on - strand, within EX28DRAFT_4365 at 33.355 kb on - strand, within EX28DRAFT_4365 at 33.417 kb on - strand at 33.417 kb on - strand at 33.417 kb on - strand at 33.421 kb on - strand at 33.421 kb on - strand at 33.584 kb on + strand, within EX28DRAFT_4366 at 33.647 kb on + strand, within EX28DRAFT_4366 at 33.659 kb on - strand, within EX28DRAFT_4366 at 33.696 kb on + strand, within EX28DRAFT_4366 at 33.697 kb on - strand, within EX28DRAFT_4366 at 33.711 kb on + strand, within EX28DRAFT_4366 at 33.712 kb on - strand, within EX28DRAFT_4366 at 33.731 kb on - strand, within EX28DRAFT_4366 at 33.786 kb on - strand, within EX28DRAFT_4366 at 33.897 kb on + strand at 33.898 kb on - strand at 33.898 kb on - strand at 33.918 kb on + strand at 33.938 kb on + strand at 33.938 kb on + strand at 33.938 kb on + strand at 33.952 kb on - strand at 33.981 kb on - strand at 33.981 kb on - strand at 33.981 kb on - strand at 33.981 kb on - strand at 34.004 kb on + strand at 34.015 kb on + strand at 34.015 kb on + strand at 34.015 kb on + strand at 34.017 kb on + strand at 34.028 kb on + strand at 34.038 kb on - strand at 34.208 kb on + strand, within EX28DRAFT_4367 at 34.209 kb on - strand, within EX28DRAFT_4367 at 34.209 kb on - strand, within EX28DRAFT_4367 at 34.250 kb on + strand, within EX28DRAFT_4367 at 34.251 kb on - strand, within EX28DRAFT_4367 at 34.290 kb on + strand, within EX28DRAFT_4367 at 34.333 kb on - strand, within EX28DRAFT_4367 at 34.370 kb on - strand, within EX28DRAFT_4367 at 34.402 kb on + strand, within EX28DRAFT_4367 at 34.518 kb on + strand, within EX28DRAFT_4367 at 34.518 kb on + strand, within EX28DRAFT_4367 at 34.520 kb on + strand, within EX28DRAFT_4367 at 34.520 kb on + strand, within EX28DRAFT_4367 at 34.520 kb on + strand, within EX28DRAFT_4367 at 34.520 kb on + strand, within EX28DRAFT_4367 at 34.521 kb on - strand, within EX28DRAFT_4367 at 34.521 kb on - strand, within EX28DRAFT_4367 at 34.521 kb on - strand, within EX28DRAFT_4367 at 34.521 kb on - strand, within EX28DRAFT_4367 at 34.521 kb on - strand, within EX28DRAFT_4367 at 34.543 kb on - strand, within EX28DRAFT_4367 at 34.585 kb on + strand at 34.586 kb on - strand at 34.601 kb on + strand at 34.601 kb on + strand at 34.601 kb on + strand at 34.606 kb on + strand at 34.680 kb on - strand at 34.869 kb on + strand, within EX28DRAFT_4368 at 34.869 kb on + strand, within EX28DRAFT_4368 at 34.870 kb on - strand, within EX28DRAFT_4368 at 34.870 kb on - strand, within EX28DRAFT_4368 at 34.928 kb on + strand, within EX28DRAFT_4368 at 34.954 kb on - strand, within EX28DRAFT_4368 at 34.954 kb on - strand, within EX28DRAFT_4368 at 34.954 kb on - strand, within EX28DRAFT_4368 at 34.954 kb on - strand, within EX28DRAFT_4368 at 34.991 kb on + strand, within EX28DRAFT_4368 at 35.013 kb on + strand, within EX28DRAFT_4368 at 35.088 kb on + strand, within EX28DRAFT_4368 at 35.089 kb on - strand, within EX28DRAFT_4368 at 35.089 kb on - strand, within EX28DRAFT_4368 at 35.190 kb on + strand, within EX28DRAFT_4368 at 35.292 kb on + strand, within EX28DRAFT_4368 at 35.292 kb on + strand, within EX28DRAFT_4368 at 35.293 kb on - strand, within EX28DRAFT_4368 at 35.368 kb on - strand, within EX28DRAFT_4368 at 35.404 kb on + strand at 35.405 kb on - strand at 35.435 kb on + strand at 35.493 kb on + strand at 35.571 kb on + strand, within EX28DRAFT_4369 at 35.571 kb on + strand, within EX28DRAFT_4369 at 35.571 kb on + strand, within EX28DRAFT_4369 at 35.572 kb on - strand, within EX28DRAFT_4369
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 33,033 - EX28DRAFT_4365 0.43 -0.4 33,080 + EX28DRAFT_4365 0.50 -0.6 33,081 - EX28DRAFT_4365 0.50 +0.3 33,164 + EX28DRAFT_4365 0.61 -0.6 33,167 + EX28DRAFT_4365 0.61 +0.4 33,168 - EX28DRAFT_4365 0.62 +0.4 33,171 - EX28DRAFT_4365 0.62 +0.5 33,172 + EX28DRAFT_4365 0.62 -0.0 33,173 - EX28DRAFT_4365 0.62 -0.5 33,173 - EX28DRAFT_4365 0.62 +0.6 33,174 + EX28DRAFT_4365 0.62 +0.5 33,174 + EX28DRAFT_4365 0.62 +0.7 33,175 - EX28DRAFT_4365 0.62 +0.6 33,175 - EX28DRAFT_4365 0.62 -0.3 33,253 + EX28DRAFT_4365 0.73 +0.3 33,261 + EX28DRAFT_4365 0.74 -0.0 33,283 + EX28DRAFT_4365 0.77 -0.4 33,332 - EX28DRAFT_4365 0.84 +0.6 33,352 - EX28DRAFT_4365 0.86 -0.9 33,355 - EX28DRAFT_4365 0.87 +1.2 33,417 - -0.0 33,417 - -1.4 33,417 - +0.4 33,421 - -2.1 33,421 - +0.7 33,584 + EX28DRAFT_4366 0.28 +0.4 33,647 + EX28DRAFT_4366 0.42 +0.7 33,659 - EX28DRAFT_4366 0.44 +0.1 33,696 + EX28DRAFT_4366 0.52 +0.7 33,697 - EX28DRAFT_4366 0.52 +0.1 33,711 + EX28DRAFT_4366 0.55 -1.4 33,712 - EX28DRAFT_4366 0.56 -0.7 33,731 - EX28DRAFT_4366 0.60 -0.2 33,786 - EX28DRAFT_4366 0.71 -0.1 33,897 + +0.1 33,898 - +0.9 33,898 - -0.3 33,918 + +0.8 33,938 + +0.1 33,938 + -0.0 33,938 + +0.5 33,952 - -0.1 33,981 - -0.4 33,981 - +0.9 33,981 - +0.2 33,981 - +0.6 34,004 + +1.4 34,015 + +0.3 34,015 + +2.1 34,015 + -0.5 34,017 + +0.2 34,028 + -0.6 34,038 - +1.0 34,208 + EX28DRAFT_4367 0.33 +2.9 34,209 - EX28DRAFT_4367 0.33 +0.3 34,209 - EX28DRAFT_4367 0.33 +0.5 34,250 + EX28DRAFT_4367 0.40 +0.3 34,251 - EX28DRAFT_4367 0.40 +1.2 34,290 + EX28DRAFT_4367 0.47 -1.0 34,333 - EX28DRAFT_4367 0.54 +0.9 34,370 - EX28DRAFT_4367 0.60 -0.0 34,402 + EX28DRAFT_4367 0.66 -0.2 34,518 + EX28DRAFT_4367 0.85 -0.5 34,518 + EX28DRAFT_4367 0.85 +0.0 34,520 + EX28DRAFT_4367 0.85 +0.4 34,520 + EX28DRAFT_4367 0.85 +0.4 34,520 + EX28DRAFT_4367 0.85 +0.8 34,520 + EX28DRAFT_4367 0.85 +0.3 34,521 - EX28DRAFT_4367 0.85 -0.1 34,521 - EX28DRAFT_4367 0.85 +1.0 34,521 - EX28DRAFT_4367 0.85 -0.2 34,521 - EX28DRAFT_4367 0.85 -1.9 34,521 - EX28DRAFT_4367 0.85 -0.2 34,543 - EX28DRAFT_4367 0.89 +0.9 34,585 + +0.4 34,586 - -0.2 34,601 + -0.1 34,601 + +0.2 34,601 + +0.6 34,606 + +0.0 34,680 - +0.2 34,869 + EX28DRAFT_4368 0.30 +0.0 34,869 + EX28DRAFT_4368 0.30 -0.1 34,870 - EX28DRAFT_4368 0.30 -0.6 34,870 - EX28DRAFT_4368 0.30 -0.2 34,928 + EX28DRAFT_4368 0.37 +1.7 34,954 - EX28DRAFT_4368 0.40 -1.2 34,954 - EX28DRAFT_4368 0.40 -0.1 34,954 - EX28DRAFT_4368 0.40 -1.6 34,954 - EX28DRAFT_4368 0.40 +0.0 34,991 + EX28DRAFT_4368 0.44 +0.1 35,013 + EX28DRAFT_4368 0.47 +0.1 35,088 + EX28DRAFT_4368 0.55 -0.1 35,089 - EX28DRAFT_4368 0.55 +0.2 35,089 - EX28DRAFT_4368 0.55 +0.2 35,190 + EX28DRAFT_4368 0.67 +1.5 35,292 + EX28DRAFT_4368 0.78 +0.1 35,292 + EX28DRAFT_4368 0.78 +0.3 35,293 - EX28DRAFT_4368 0.78 +0.1 35,368 - EX28DRAFT_4368 0.87 +0.6 35,404 + +1.1 35,405 - +1.2 35,435 + +0.3 35,493 + -1.3 35,571 + EX28DRAFT_4369 0.21 +0.1 35,571 + EX28DRAFT_4369 0.21 -0.1 35,571 + EX28DRAFT_4369 0.21 +1.4 35,572 - EX28DRAFT_4369 0.21 +0.5
Or see this region's nucleotide sequence