Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4237 and EX28DRAFT_4238 are separated by 76 nucleotides EX28DRAFT_4238 and EX28DRAFT_4239 are separated by 150 nucleotides
EX28DRAFT_4237: EX28DRAFT_4237 - Transcriptional regulator, at 42,986 to 43,873
_4237
EX28DRAFT_4238: EX28DRAFT_4238 - Na+/H+ antiporter, bacterial form, at 43,950 to 45,596
_4238
EX28DRAFT_4239: EX28DRAFT_4239 - Permeases, at 45,747 to 47,096
_4239
Position (kb) 43
44
45
46 Strain fitness (log2 ratio) -1
0
1
2 at 42.952 kb on - strand at 42.966 kb on + strand at 42.966 kb on + strand at 42.969 kb on - strand at 42.993 kb on + strand at 43.040 kb on - strand at 43.565 kb on + strand, within EX28DRAFT_4237 at 43.566 kb on - strand, within EX28DRAFT_4237 at 43.618 kb on + strand, within EX28DRAFT_4237 at 43.715 kb on - strand, within EX28DRAFT_4237 at 43.715 kb on - strand, within EX28DRAFT_4237 at 43.809 kb on - strand at 43.809 kb on - strand at 43.812 kb on + strand at 43.910 kb on + strand at 43.911 kb on - strand at 43.911 kb on - strand at 44.048 kb on - strand at 44.288 kb on + strand, within EX28DRAFT_4238 at 44.330 kb on + strand, within EX28DRAFT_4238 at 44.330 kb on + strand, within EX28DRAFT_4238 at 44.331 kb on - strand, within EX28DRAFT_4238 at 44.331 kb on - strand, within EX28DRAFT_4238 at 44.354 kb on + strand, within EX28DRAFT_4238 at 44.355 kb on - strand, within EX28DRAFT_4238 at 44.355 kb on - strand, within EX28DRAFT_4238 at 44.626 kb on + strand, within EX28DRAFT_4238 at 44.899 kb on + strand, within EX28DRAFT_4238 at 44.899 kb on + strand, within EX28DRAFT_4238 at 44.929 kb on - strand, within EX28DRAFT_4238 at 44.929 kb on - strand, within EX28DRAFT_4238 at 45.284 kb on - strand, within EX28DRAFT_4238 at 45.528 kb on + strand at 45.576 kb on + strand at 45.621 kb on + strand at 45.621 kb on + strand at 45.622 kb on - strand at 45.622 kb on - strand at 45.622 kb on - strand at 45.622 kb on - strand at 45.626 kb on - strand at 45.626 kb on - strand at 45.649 kb on + strand at 45.649 kb on + strand at 45.649 kb on + strand at 45.654 kb on + strand at 45.654 kb on + strand at 45.655 kb on - strand at 45.655 kb on - strand at 45.748 kb on + strand at 45.749 kb on - strand at 45.749 kb on - strand at 45.749 kb on - strand at 45.749 kb on - strand at 45.749 kb on - strand at 45.749 kb on - strand at 45.819 kb on - strand at 45.819 kb on - strand at 45.819 kb on - strand at 45.872 kb on + strand at 45.994 kb on + strand, within EX28DRAFT_4239 at 45.995 kb on - strand, within EX28DRAFT_4239 at 45.995 kb on - strand, within EX28DRAFT_4239 at 46.034 kb on - strand, within EX28DRAFT_4239 at 46.138 kb on + strand, within EX28DRAFT_4239 at 46.275 kb on - strand, within EX28DRAFT_4239 at 46.275 kb on - strand, within EX28DRAFT_4239 at 46.275 kb on - strand, within EX28DRAFT_4239 at 46.542 kb on - strand, within EX28DRAFT_4239 at 46.542 kb on - strand, within EX28DRAFT_4239
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 42,952 - +0.8 42,966 + -0.8 42,966 + +0.7 42,969 - +1.3 42,993 + +1.0 43,040 - -0.0 43,565 + EX28DRAFT_4237 0.65 -1.5 43,566 - EX28DRAFT_4237 0.65 -0.8 43,618 + EX28DRAFT_4237 0.71 +1.1 43,715 - EX28DRAFT_4237 0.82 +0.7 43,715 - EX28DRAFT_4237 0.82 +0.6 43,809 - -0.8 43,809 - -0.4 43,812 + +0.0 43,910 + -0.4 43,911 - +1.1 43,911 - -0.2 44,048 - -0.4 44,288 + EX28DRAFT_4238 0.21 -0.8 44,330 + EX28DRAFT_4238 0.23 +0.2 44,330 + EX28DRAFT_4238 0.23 +0.5 44,331 - EX28DRAFT_4238 0.23 +0.3 44,331 - EX28DRAFT_4238 0.23 +0.3 44,354 + EX28DRAFT_4238 0.25 -0.1 44,355 - EX28DRAFT_4238 0.25 +0.7 44,355 - EX28DRAFT_4238 0.25 +0.4 44,626 + EX28DRAFT_4238 0.41 +1.3 44,899 + EX28DRAFT_4238 0.58 +0.7 44,899 + EX28DRAFT_4238 0.58 +0.4 44,929 - EX28DRAFT_4238 0.59 +1.1 44,929 - EX28DRAFT_4238 0.59 +0.7 45,284 - EX28DRAFT_4238 0.81 +0.4 45,528 + +0.5 45,576 + -0.0 45,621 + +0.1 45,621 + +0.3 45,622 - -0.3 45,622 - +0.1 45,622 - -0.1 45,622 - -1.0 45,626 - +0.5 45,626 - -0.9 45,649 + -0.5 45,649 + -1.0 45,649 + -0.0 45,654 + +0.3 45,654 + -0.0 45,655 - +0.2 45,655 - +0.2 45,748 + +2.7 45,749 - +0.5 45,749 - -1.5 45,749 - -0.0 45,749 - -0.9 45,749 - -0.1 45,749 - +0.0 45,819 - +0.5 45,819 - +0.3 45,819 - +0.0 45,872 + -0.1 45,994 + EX28DRAFT_4239 0.18 +0.1 45,995 - EX28DRAFT_4239 0.18 -0.3 45,995 - EX28DRAFT_4239 0.18 -0.3 46,034 - EX28DRAFT_4239 0.21 +0.2 46,138 + EX28DRAFT_4239 0.29 -0.1 46,275 - EX28DRAFT_4239 0.39 +0.0 46,275 - EX28DRAFT_4239 0.39 +0.7 46,275 - EX28DRAFT_4239 0.39 -0.0 46,542 - EX28DRAFT_4239 0.59 +0.4 46,542 - EX28DRAFT_4239 0.59 +0.1
Or see this region's nucleotide sequence