Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4181 and EX28DRAFT_4182 are separated by 51 nucleotides EX28DRAFT_4182 and EX28DRAFT_4183 are separated by 238 nucleotides EX28DRAFT_4183 and EX28DRAFT_4184 are separated by 166 nucleotides EX28DRAFT_4184 and EX28DRAFT_4185 overlap by 1 nucleotides
EX28DRAFT_4181: EX28DRAFT_4181 - FKBP-type peptidyl-prolyl cis-trans isomerases 2, at 164,667 to 165,257
_4181
EX28DRAFT_4182: EX28DRAFT_4182 - Uncharacterized protein conserved in bacteria, at 165,309 to 165,527
_4182
EX28DRAFT_4183: EX28DRAFT_4183 - FKBP-type peptidyl-prolyl cis-trans isomerases 1, at 165,766 to 166,572
_4183
EX28DRAFT_4184: EX28DRAFT_4184 - Uncharacterized protein conserved in bacteria, at 166,739 to 167,461
_4184
EX28DRAFT_4185: EX28DRAFT_4185 - sulfur relay protein TusD/DsrE, at 167,461 to 167,847
_4185
Position (kb) 165
166
167 Strain fitness (log2 ratio) -1
0
1
2
3 at 164.766 kb on + strand, within EX28DRAFT_4181 at 165.256 kb on - strand at 165.448 kb on - strand, within EX28DRAFT_4182 at 165.510 kb on + strand at 165.510 kb on + strand at 165.510 kb on + strand at 165.511 kb on - strand at 165.511 kb on - strand at 165.518 kb on + strand at 165.630 kb on + strand at 165.703 kb on + strand at 165.705 kb on + strand at 165.708 kb on + strand at 165.708 kb on + strand at 165.708 kb on + strand at 165.709 kb on - strand at 165.709 kb on - strand at 165.712 kb on + strand at 165.712 kb on + strand at 165.721 kb on + strand at 165.721 kb on + strand at 165.762 kb on - strand at 165.785 kb on + strand at 166.035 kb on + strand, within EX28DRAFT_4183 at 166.217 kb on - strand, within EX28DRAFT_4183 at 166.288 kb on - strand, within EX28DRAFT_4183 at 166.288 kb on - strand, within EX28DRAFT_4183 at 166.571 kb on - strand at 166.613 kb on - strand at 166.626 kb on + strand at 166.626 kb on + strand at 166.627 kb on - strand at 166.628 kb on + strand at 166.628 kb on + strand at 166.629 kb on - strand at 166.632 kb on + strand at 166.633 kb on - strand at 166.662 kb on + strand at 166.667 kb on + strand at 166.667 kb on + strand at 166.679 kb on + strand at 166.679 kb on + strand at 166.683 kb on + strand at 166.683 kb on + strand at 167.330 kb on + strand, within EX28DRAFT_4184 at 167.408 kb on + strand at 167.414 kb on + strand at 167.416 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 164,766 + EX28DRAFT_4181 0.17 +0.1 165,256 - -0.0 165,448 - EX28DRAFT_4182 0.63 +0.3 165,510 + +0.2 165,510 + +0.8 165,510 + -0.2 165,511 - +0.0 165,511 - -0.3 165,518 + +0.5 165,630 + +0.1 165,703 + +0.2 165,705 + +0.4 165,708 + -0.5 165,708 + +0.2 165,708 + -1.0 165,709 - -0.8 165,709 - +0.1 165,712 + +0.6 165,712 + -0.2 165,721 + +0.4 165,721 + +0.1 165,762 - -1.0 165,785 + +0.1 166,035 + EX28DRAFT_4183 0.33 -0.9 166,217 - EX28DRAFT_4183 0.56 -1.1 166,288 - EX28DRAFT_4183 0.65 +0.6 166,288 - EX28DRAFT_4183 0.65 -0.9 166,571 - +0.2 166,613 - -0.2 166,626 + -1.0 166,626 + +0.8 166,627 - +0.9 166,628 + +0.2 166,628 + -0.2 166,629 - +0.9 166,632 + +0.6 166,633 - +0.3 166,662 + -0.3 166,667 + -0.1 166,667 + -0.5 166,679 + +0.0 166,679 + -0.9 166,683 + +2.8 166,683 + -0.7 167,330 + EX28DRAFT_4184 0.82 -0.5 167,408 + -0.4 167,414 + -0.5 167,416 + +0.6
Or see this region's nucleotide sequence