Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4086 and EX28DRAFT_4087 overlap by 1 nucleotides EX28DRAFT_4087 and EX28DRAFT_4088 overlap by 4 nucleotides EX28DRAFT_4088 and EX28DRAFT_4089 overlap by 53 nucleotides EX28DRAFT_4089 and EX28DRAFT_4090 are separated by 2 nucleotides
EX28DRAFT_4086: EX28DRAFT_4086 - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family, at 61,431 to 63,086
_4086
EX28DRAFT_4087: EX28DRAFT_4087 - Membrane transporters of cations and cationic drugs, at 63,086 to 63,421
_4087
EX28DRAFT_4088: EX28DRAFT_4088 - hypothetical protein, at 63,418 to 63,807
_4088
EX28DRAFT_4089: EX28DRAFT_4089 - Phosphopantetheinyl transferase, at 63,755 to 64,372
_4089
EX28DRAFT_4090: EX28DRAFT_4090 - 3-oxoacyl-(acyl-carrier-protein) synthase, at 64,375 to 65,604
_4090
Position (kb) 63
64
65 Strain fitness (log2 ratio) -1
0
1
2 at 62.913 kb on + strand, within EX28DRAFT_4086 at 63.005 kb on + strand at 63.042 kb on + strand at 63.043 kb on - strand at 63.043 kb on - strand at 63.043 kb on - strand at 63.044 kb on + strand at 63.805 kb on + strand at 63.826 kb on + strand, within EX28DRAFT_4089 at 63.826 kb on + strand, within EX28DRAFT_4089 at 63.827 kb on - strand, within EX28DRAFT_4089 at 63.827 kb on - strand, within EX28DRAFT_4089 at 63.872 kb on + strand, within EX28DRAFT_4089 at 64.372 kb on + strand at 64.372 kb on + strand at 64.373 kb on - strand at 64.373 kb on - strand at 64.373 kb on - strand at 64.373 kb on - strand at 64.476 kb on + strand at 64.477 kb on - strand at 64.478 kb on + strand at 64.479 kb on - strand at 64.479 kb on - strand at 64.483 kb on + strand at 64.484 kb on - strand at 64.484 kb on - strand at 64.597 kb on - strand, within EX28DRAFT_4090 at 64.607 kb on + strand, within EX28DRAFT_4090 at 64.608 kb on - strand, within EX28DRAFT_4090 at 64.643 kb on + strand, within EX28DRAFT_4090 at 64.644 kb on - strand, within EX28DRAFT_4090 at 64.710 kb on + strand, within EX28DRAFT_4090 at 64.712 kb on + strand, within EX28DRAFT_4090 at 64.713 kb on - strand, within EX28DRAFT_4090 at 64.713 kb on - strand, within EX28DRAFT_4090 at 64.713 kb on - strand, within EX28DRAFT_4090 at 64.932 kb on + strand, within EX28DRAFT_4090 at 64.957 kb on - strand, within EX28DRAFT_4090 at 65.109 kb on + strand, within EX28DRAFT_4090 at 65.110 kb on - strand, within EX28DRAFT_4090 at 65.143 kb on + strand, within EX28DRAFT_4090 at 65.198 kb on + strand, within EX28DRAFT_4090 at 65.198 kb on + strand, within EX28DRAFT_4090 at 65.198 kb on + strand, within EX28DRAFT_4090 at 65.199 kb on - strand, within EX28DRAFT_4090 at 65.199 kb on - strand, within EX28DRAFT_4090 at 65.199 kb on - strand, within EX28DRAFT_4090 at 65.217 kb on + strand, within EX28DRAFT_4090
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 62,913 + EX28DRAFT_4086 0.89 -0.2 63,005 + -1.2 63,042 + -1.2 63,043 - -0.6 63,043 - -0.8 63,043 - +0.4 63,044 + +0.3 63,805 + +0.6 63,826 + EX28DRAFT_4089 0.11 -1.2 63,826 + EX28DRAFT_4089 0.11 -0.0 63,827 - EX28DRAFT_4089 0.12 -0.0 63,827 - EX28DRAFT_4089 0.12 -0.5 63,872 + EX28DRAFT_4089 0.19 -0.2 64,372 + -0.4 64,372 + -0.0 64,373 - +0.4 64,373 - -0.3 64,373 - +0.2 64,373 - -1.4 64,476 + +0.2 64,477 - -0.2 64,478 + -1.6 64,479 - +0.0 64,479 - +0.2 64,483 + +0.0 64,484 - +1.3 64,484 - -0.1 64,597 - EX28DRAFT_4090 0.18 -0.9 64,607 + EX28DRAFT_4090 0.19 -0.1 64,608 - EX28DRAFT_4090 0.19 +1.8 64,643 + EX28DRAFT_4090 0.22 -0.3 64,644 - EX28DRAFT_4090 0.22 -0.4 64,710 + EX28DRAFT_4090 0.27 +0.7 64,712 + EX28DRAFT_4090 0.27 +0.1 64,713 - EX28DRAFT_4090 0.27 +0.3 64,713 - EX28DRAFT_4090 0.27 +0.2 64,713 - EX28DRAFT_4090 0.27 -0.5 64,932 + EX28DRAFT_4090 0.45 +0.5 64,957 - EX28DRAFT_4090 0.47 +0.1 65,109 + EX28DRAFT_4090 0.60 +0.1 65,110 - EX28DRAFT_4090 0.60 +0.1 65,143 + EX28DRAFT_4090 0.62 -0.2 65,198 + EX28DRAFT_4090 0.67 -1.0 65,198 + EX28DRAFT_4090 0.67 -0.6 65,198 + EX28DRAFT_4090 0.67 +1.2 65,199 - EX28DRAFT_4090 0.67 -0.1 65,199 - EX28DRAFT_4090 0.67 +0.7 65,199 - EX28DRAFT_4090 0.67 -1.1 65,217 + EX28DRAFT_4090 0.68 +0.4
Or see this region's nucleotide sequence