Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4069 and EX28DRAFT_4070 are separated by 228 nucleotides EX28DRAFT_4070 and EX28DRAFT_4071 are separated by 32 nucleotides EX28DRAFT_4071 and EX28DRAFT_4072 overlap by 1 nucleotides
EX28DRAFT_4069: EX28DRAFT_4069 - Phosphate transporter family, at 43,394 to 44,893
_4069
EX28DRAFT_4070: EX28DRAFT_4070 - flavoprotein, HI0933 family, at 45,122 to 46,318
_4070
EX28DRAFT_4071: EX28DRAFT_4071 - Phosphoglycerate dehydrogenase and related dehydrogenases, at 46,351 to 47,289
_4071
EX28DRAFT_4072: EX28DRAFT_4072 - Demethylmenaquinone methyltransferase, at 47,289 to 47,981
_4072
Position (kb) 45
46
47 Strain fitness (log2 ratio) -2
-1
0
1
2 at 44.986 kb on - strand at 44.986 kb on - strand at 45.226 kb on + strand at 45.227 kb on - strand at 45.288 kb on - strand, within EX28DRAFT_4070 at 45.288 kb on - strand, within EX28DRAFT_4070 at 45.288 kb on - strand, within EX28DRAFT_4070 at 45.367 kb on + strand, within EX28DRAFT_4070 at 45.543 kb on - strand, within EX28DRAFT_4070 at 45.581 kb on - strand, within EX28DRAFT_4070 at 45.643 kb on + strand, within EX28DRAFT_4070 at 45.643 kb on + strand, within EX28DRAFT_4070 at 45.644 kb on - strand, within EX28DRAFT_4070 at 45.667 kb on + strand, within EX28DRAFT_4070 at 45.712 kb on + strand, within EX28DRAFT_4070 at 45.713 kb on - strand, within EX28DRAFT_4070 at 45.811 kb on + strand, within EX28DRAFT_4070 at 46.049 kb on - strand, within EX28DRAFT_4070 at 46.254 kb on - strand at 46.321 kb on + strand at 46.322 kb on - strand at 46.322 kb on - strand at 46.322 kb on - strand at 46.389 kb on + strand at 46.389 kb on + strand at 46.390 kb on - strand at 46.390 kb on - strand at 46.419 kb on + strand at 46.419 kb on + strand at 46.419 kb on + strand at 46.421 kb on + strand at 46.421 kb on + strand at 46.422 kb on - strand at 46.422 kb on - strand at 46.447 kb on - strand, within EX28DRAFT_4071 at 46.600 kb on - strand, within EX28DRAFT_4071 at 46.645 kb on - strand, within EX28DRAFT_4071 at 46.758 kb on + strand, within EX28DRAFT_4071 at 46.758 kb on + strand, within EX28DRAFT_4071 at 46.759 kb on - strand, within EX28DRAFT_4071 at 46.772 kb on + strand, within EX28DRAFT_4071 at 46.965 kb on + strand, within EX28DRAFT_4071 at 46.965 kb on + strand, within EX28DRAFT_4071 at 46.966 kb on - strand, within EX28DRAFT_4071 at 46.966 kb on - strand, within EX28DRAFT_4071 at 47.131 kb on + strand, within EX28DRAFT_4071 at 47.131 kb on + strand, within EX28DRAFT_4071 at 47.161 kb on - strand, within EX28DRAFT_4071 at 47.209 kb on + strand at 47.224 kb on + strand at 47.225 kb on - strand at 47.273 kb on - strand at 47.315 kb on + strand at 47.315 kb on + strand at 47.316 kb on - strand at 47.316 kb on - strand at 47.316 kb on - strand at 47.316 kb on - strand at 47.316 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 44,986 - -0.0 44,986 - -1.1 45,226 + -1.2 45,227 - -0.2 45,288 - EX28DRAFT_4070 0.14 +0.1 45,288 - EX28DRAFT_4070 0.14 +0.6 45,288 - EX28DRAFT_4070 0.14 +0.3 45,367 + EX28DRAFT_4070 0.20 -0.2 45,543 - EX28DRAFT_4070 0.35 -0.9 45,581 - EX28DRAFT_4070 0.38 -0.7 45,643 + EX28DRAFT_4070 0.44 +1.2 45,643 + EX28DRAFT_4070 0.44 +1.0 45,644 - EX28DRAFT_4070 0.44 +0.6 45,667 + EX28DRAFT_4070 0.46 +0.3 45,712 + EX28DRAFT_4070 0.49 +1.1 45,713 - EX28DRAFT_4070 0.49 +0.6 45,811 + EX28DRAFT_4070 0.58 +0.5 46,049 - EX28DRAFT_4070 0.77 +0.7 46,254 - +0.1 46,321 + +2.4 46,322 - -0.4 46,322 - -2.6 46,322 - +0.0 46,389 + +0.8 46,389 + +0.2 46,390 - +0.4 46,390 - +0.4 46,419 + -0.1 46,419 + +0.3 46,419 + -0.1 46,421 + +1.6 46,421 + -0.1 46,422 - -0.4 46,422 - +0.2 46,447 - EX28DRAFT_4071 0.10 +0.2 46,600 - EX28DRAFT_4071 0.27 -0.1 46,645 - EX28DRAFT_4071 0.31 -0.5 46,758 + EX28DRAFT_4071 0.43 +0.1 46,758 + EX28DRAFT_4071 0.43 -0.4 46,759 - EX28DRAFT_4071 0.43 -0.6 46,772 + EX28DRAFT_4071 0.45 +1.7 46,965 + EX28DRAFT_4071 0.65 -0.0 46,965 + EX28DRAFT_4071 0.65 -0.5 46,966 - EX28DRAFT_4071 0.65 -0.3 46,966 - EX28DRAFT_4071 0.65 +0.4 47,131 + EX28DRAFT_4071 0.83 -0.5 47,131 + EX28DRAFT_4071 0.83 -0.1 47,161 - EX28DRAFT_4071 0.86 -0.4 47,209 + -0.1 47,224 + -0.7 47,225 - -0.1 47,273 - +0.2 47,315 + +0.6 47,315 + -1.2 47,316 - +0.5 47,316 - +0.5 47,316 - -0.2 47,316 - -1.8 47,316 - +0.4
Or see this region's nucleotide sequence