Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4055 and EX28DRAFT_4056 are separated by 52 nucleotides EX28DRAFT_4056 and EX28DRAFT_4057 are separated by 119 nucleotides
EX28DRAFT_4055: EX28DRAFT_4055 - inner membrane protein YhjD, at 28,673 to 29,698
_4055
EX28DRAFT_4056: EX28DRAFT_4056 - Transcriptional regulator, at 29,751 to 30,650
_4056
EX28DRAFT_4057: EX28DRAFT_4057 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 30,770 to 31,528
_4057
Position (kb) 29
30
31 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 28.768 kb on - strand at 28.842 kb on + strand, within EX28DRAFT_4055 at 28.962 kb on + strand, within EX28DRAFT_4055 at 28.962 kb on + strand, within EX28DRAFT_4055 at 28.962 kb on + strand, within EX28DRAFT_4055 at 28.963 kb on - strand, within EX28DRAFT_4055 at 28.963 kb on - strand, within EX28DRAFT_4055 at 29.025 kb on + strand, within EX28DRAFT_4055 at 29.025 kb on + strand, within EX28DRAFT_4055 at 29.026 kb on - strand, within EX28DRAFT_4055 at 29.034 kb on + strand, within EX28DRAFT_4055 at 29.035 kb on - strand, within EX28DRAFT_4055 at 29.080 kb on + strand, within EX28DRAFT_4055 at 29.118 kb on - strand, within EX28DRAFT_4055 at 29.142 kb on + strand, within EX28DRAFT_4055 at 29.146 kb on + strand, within EX28DRAFT_4055 at 29.176 kb on + strand, within EX28DRAFT_4055 at 29.247 kb on + strand, within EX28DRAFT_4055 at 29.284 kb on + strand, within EX28DRAFT_4055 at 29.350 kb on + strand, within EX28DRAFT_4055 at 29.350 kb on + strand, within EX28DRAFT_4055 at 29.371 kb on + strand, within EX28DRAFT_4055 at 29.652 kb on + strand at 29.653 kb on - strand at 29.653 kb on - strand at 29.657 kb on + strand at 29.657 kb on + strand at 29.658 kb on - strand at 29.658 kb on - strand at 29.740 kb on - strand at 29.742 kb on - strand at 29.781 kb on + strand at 29.936 kb on + strand, within EX28DRAFT_4056 at 30.035 kb on - strand, within EX28DRAFT_4056 at 30.139 kb on + strand, within EX28DRAFT_4056 at 30.139 kb on + strand, within EX28DRAFT_4056 at 30.458 kb on - strand, within EX28DRAFT_4056 at 30.507 kb on + strand, within EX28DRAFT_4056 at 30.724 kb on - strand at 30.765 kb on - strand at 30.766 kb on + strand at 30.766 kb on + strand at 30.767 kb on - strand at 30.767 kb on - strand at 30.869 kb on + strand, within EX28DRAFT_4057 at 30.961 kb on + strand, within EX28DRAFT_4057 at 31.065 kb on + strand, within EX28DRAFT_4057 at 31.065 kb on + strand, within EX28DRAFT_4057 at 31.067 kb on + strand, within EX28DRAFT_4057 at 31.068 kb on - strand, within EX28DRAFT_4057 at 31.068 kb on - strand, within EX28DRAFT_4057 at 31.239 kb on - strand, within EX28DRAFT_4057 at 31.319 kb on - strand, within EX28DRAFT_4057 at 31.319 kb on - strand, within EX28DRAFT_4057 at 31.572 kb on + strand at 31.573 kb on - strand at 31.573 kb on - strand at 31.645 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 28,768 - -0.1 28,842 + EX28DRAFT_4055 0.16 -0.4 28,962 + EX28DRAFT_4055 0.28 +0.5 28,962 + EX28DRAFT_4055 0.28 +0.2 28,962 + EX28DRAFT_4055 0.28 -0.2 28,963 - EX28DRAFT_4055 0.28 -0.7 28,963 - EX28DRAFT_4055 0.28 -0.3 29,025 + EX28DRAFT_4055 0.34 +0.3 29,025 + EX28DRAFT_4055 0.34 +1.0 29,026 - EX28DRAFT_4055 0.34 -0.6 29,034 + EX28DRAFT_4055 0.35 +0.6 29,035 - EX28DRAFT_4055 0.35 +0.4 29,080 + EX28DRAFT_4055 0.40 -0.2 29,118 - EX28DRAFT_4055 0.43 -0.2 29,142 + EX28DRAFT_4055 0.46 -0.4 29,146 + EX28DRAFT_4055 0.46 +0.5 29,176 + EX28DRAFT_4055 0.49 +0.3 29,247 + EX28DRAFT_4055 0.56 +0.2 29,284 + EX28DRAFT_4055 0.60 -0.4 29,350 + EX28DRAFT_4055 0.66 +0.0 29,350 + EX28DRAFT_4055 0.66 +1.2 29,371 + EX28DRAFT_4055 0.68 +0.5 29,652 + -0.1 29,653 - -0.1 29,653 - -0.6 29,657 + -0.6 29,657 + +0.3 29,658 - -2.0 29,658 - -0.3 29,740 - -0.0 29,742 - -0.1 29,781 + -3.7 29,936 + EX28DRAFT_4056 0.21 -1.0 30,035 - EX28DRAFT_4056 0.32 -1.4 30,139 + EX28DRAFT_4056 0.43 -0.2 30,139 + EX28DRAFT_4056 0.43 -2.3 30,458 - EX28DRAFT_4056 0.79 +0.5 30,507 + EX28DRAFT_4056 0.84 -0.0 30,724 - +0.9 30,765 - -0.2 30,766 + +0.1 30,766 + +0.2 30,767 - -0.6 30,767 - -0.4 30,869 + EX28DRAFT_4057 0.13 -0.5 30,961 + EX28DRAFT_4057 0.25 +0.2 31,065 + EX28DRAFT_4057 0.39 -0.2 31,065 + EX28DRAFT_4057 0.39 -0.3 31,067 + EX28DRAFT_4057 0.39 +2.3 31,068 - EX28DRAFT_4057 0.39 +0.5 31,068 - EX28DRAFT_4057 0.39 +0.0 31,239 - EX28DRAFT_4057 0.62 +2.0 31,319 - EX28DRAFT_4057 0.72 -0.8 31,319 - EX28DRAFT_4057 0.72 +0.0 31,572 + -0.5 31,573 - +0.4 31,573 - +2.5 31,645 + -0.1
Or see this region's nucleotide sequence