Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4046 and EX28DRAFT_4047 overlap by 19 nucleotides EX28DRAFT_4047 and EX28DRAFT_4048 are separated by 119 nucleotides
EX28DRAFT_4046: EX28DRAFT_4046 - Endoglucanase Y, at 13,062 to 14,168
_4046
EX28DRAFT_4047: EX28DRAFT_4047 - Tetratricopeptide repeat/Cellulose synthase operon protein C C-terminus (BCSC_C)/TPR repeat, at 14,150 to 17,632
_4047
EX28DRAFT_4048: EX28DRAFT_4048 - FOG: EAL domain, at 17,752 to 19,758
_4048
Position (kb) 14
15
16
17
18 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 13.155 kb on - strand at 13.165 kb on - strand at 13.214 kb on + strand, within EX28DRAFT_4046 at 13.237 kb on - strand, within EX28DRAFT_4046 at 13.471 kb on - strand, within EX28DRAFT_4046 at 13.473 kb on - strand, within EX28DRAFT_4046 at 13.473 kb on - strand, within EX28DRAFT_4046 at 13.473 kb on - strand, within EX28DRAFT_4046 at 13.605 kb on + strand, within EX28DRAFT_4046 at 13.605 kb on + strand, within EX28DRAFT_4046 at 13.605 kb on + strand, within EX28DRAFT_4046 at 13.629 kb on + strand, within EX28DRAFT_4046 at 13.629 kb on + strand, within EX28DRAFT_4046 at 13.757 kb on - strand, within EX28DRAFT_4046 at 13.767 kb on - strand, within EX28DRAFT_4046 at 13.804 kb on - strand, within EX28DRAFT_4046 at 13.985 kb on - strand, within EX28DRAFT_4046 at 14.045 kb on + strand, within EX28DRAFT_4046 at 14.045 kb on + strand, within EX28DRAFT_4046 at 14.045 kb on + strand, within EX28DRAFT_4046 at 14.046 kb on - strand, within EX28DRAFT_4046 at 14.046 kb on - strand, within EX28DRAFT_4046 at 14.046 kb on - strand, within EX28DRAFT_4046 at 14.053 kb on - strand, within EX28DRAFT_4046 at 14.053 kb on - strand, within EX28DRAFT_4046 at 14.055 kb on + strand, within EX28DRAFT_4046 at 14.055 kb on + strand, within EX28DRAFT_4046 at 14.055 kb on + strand, within EX28DRAFT_4046 at 14.128 kb on + strand at 14.173 kb on - strand at 14.173 kb on - strand at 14.555 kb on + strand, within EX28DRAFT_4047 at 14.555 kb on + strand, within EX28DRAFT_4047 at 14.556 kb on - strand, within EX28DRAFT_4047 at 14.692 kb on + strand, within EX28DRAFT_4047 at 14.693 kb on - strand, within EX28DRAFT_4047 at 14.776 kb on + strand, within EX28DRAFT_4047 at 14.777 kb on - strand, within EX28DRAFT_4047 at 14.777 kb on - strand, within EX28DRAFT_4047 at 14.817 kb on - strand, within EX28DRAFT_4047 at 14.873 kb on + strand, within EX28DRAFT_4047 at 14.900 kb on - strand, within EX28DRAFT_4047 at 15.010 kb on + strand, within EX28DRAFT_4047 at 15.011 kb on - strand, within EX28DRAFT_4047 at 15.269 kb on + strand, within EX28DRAFT_4047 at 15.273 kb on - strand, within EX28DRAFT_4047 at 15.308 kb on + strand, within EX28DRAFT_4047 at 15.309 kb on - strand, within EX28DRAFT_4047 at 15.347 kb on - strand, within EX28DRAFT_4047 at 15.392 kb on - strand, within EX28DRAFT_4047 at 15.433 kb on + strand, within EX28DRAFT_4047 at 15.515 kb on - strand, within EX28DRAFT_4047 at 15.750 kb on - strand, within EX28DRAFT_4047 at 15.750 kb on - strand, within EX28DRAFT_4047 at 15.764 kb on + strand, within EX28DRAFT_4047 at 16.028 kb on + strand, within EX28DRAFT_4047 at 16.028 kb on + strand, within EX28DRAFT_4047 at 16.029 kb on - strand, within EX28DRAFT_4047 at 16.029 kb on - strand, within EX28DRAFT_4047 at 16.038 kb on + strand, within EX28DRAFT_4047 at 16.092 kb on - strand, within EX28DRAFT_4047 at 16.092 kb on - strand, within EX28DRAFT_4047 at 16.093 kb on + strand, within EX28DRAFT_4047 at 16.361 kb on + strand, within EX28DRAFT_4047 at 16.362 kb on - strand, within EX28DRAFT_4047 at 16.689 kb on - strand, within EX28DRAFT_4047 at 16.689 kb on - strand, within EX28DRAFT_4047 at 16.689 kb on - strand, within EX28DRAFT_4047 at 16.712 kb on + strand, within EX28DRAFT_4047 at 16.784 kb on - strand, within EX28DRAFT_4047 at 16.856 kb on + strand, within EX28DRAFT_4047 at 16.856 kb on + strand, within EX28DRAFT_4047 at 16.885 kb on + strand, within EX28DRAFT_4047 at 16.886 kb on - strand, within EX28DRAFT_4047 at 16.948 kb on + strand, within EX28DRAFT_4047 at 16.949 kb on - strand, within EX28DRAFT_4047 at 16.978 kb on - strand, within EX28DRAFT_4047 at 16.999 kb on - strand, within EX28DRAFT_4047 at 17.009 kb on + strand, within EX28DRAFT_4047 at 17.009 kb on + strand, within EX28DRAFT_4047 at 17.010 kb on - strand, within EX28DRAFT_4047 at 17.084 kb on - strand, within EX28DRAFT_4047 at 17.111 kb on + strand, within EX28DRAFT_4047 at 17.114 kb on + strand, within EX28DRAFT_4047 at 17.114 kb on + strand, within EX28DRAFT_4047 at 17.115 kb on - strand, within EX28DRAFT_4047 at 17.117 kb on + strand, within EX28DRAFT_4047 at 17.167 kb on + strand, within EX28DRAFT_4047 at 17.168 kb on - strand, within EX28DRAFT_4047 at 17.203 kb on + strand, within EX28DRAFT_4047 at 17.204 kb on - strand, within EX28DRAFT_4047 at 17.204 kb on - strand, within EX28DRAFT_4047 at 17.226 kb on - strand, within EX28DRAFT_4047 at 17.240 kb on + strand, within EX28DRAFT_4047 at 17.240 kb on + strand, within EX28DRAFT_4047 at 17.240 kb on + strand, within EX28DRAFT_4047 at 17.240 kb on + strand, within EX28DRAFT_4047 at 17.240 kb on + strand, within EX28DRAFT_4047 at 17.241 kb on - strand, within EX28DRAFT_4047 at 17.241 kb on - strand, within EX28DRAFT_4047 at 17.329 kb on + strand at 17.330 kb on - strand at 17.394 kb on - strand at 17.445 kb on - strand at 17.494 kb on - strand at 17.494 kb on - strand at 17.494 kb on - strand at 17.529 kb on - strand at 17.552 kb on + strand at 17.552 kb on + strand at 17.552 kb on + strand at 17.552 kb on + strand at 17.552 kb on + strand at 17.552 kb on + strand at 17.552 kb on + strand at 17.552 kb on + strand at 17.553 kb on - strand at 17.656 kb on + strand at 17.656 kb on + strand at 17.657 kb on - strand at 17.689 kb on - strand at 17.708 kb on - strand at 17.807 kb on + strand at 17.819 kb on + strand at 17.819 kb on + strand at 17.888 kb on + strand at 17.889 kb on - strand at 17.895 kb on + strand at 17.895 kb on + strand at 18.163 kb on + strand, within EX28DRAFT_4048 at 18.173 kb on + strand, within EX28DRAFT_4048 at 18.198 kb on + strand, within EX28DRAFT_4048 at 18.243 kb on - strand, within EX28DRAFT_4048 at 18.247 kb on - strand, within EX28DRAFT_4048 at 18.256 kb on - strand, within EX28DRAFT_4048 at 18.333 kb on + strand, within EX28DRAFT_4048 at 18.374 kb on + strand, within EX28DRAFT_4048 at 18.401 kb on + strand, within EX28DRAFT_4048 at 18.401 kb on + strand, within EX28DRAFT_4048 at 18.401 kb on + strand, within EX28DRAFT_4048 at 18.402 kb on - strand, within EX28DRAFT_4048 at 18.405 kb on + strand, within EX28DRAFT_4048 at 18.406 kb on - strand, within EX28DRAFT_4048 at 18.406 kb on - strand, within EX28DRAFT_4048 at 18.421 kb on + strand, within EX28DRAFT_4048 at 18.464 kb on + strand, within EX28DRAFT_4048 at 18.464 kb on + strand, within EX28DRAFT_4048 at 18.507 kb on + strand, within EX28DRAFT_4048 at 18.508 kb on - strand, within EX28DRAFT_4048
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 13,155 - +0.2 13,165 - -0.1 13,214 + EX28DRAFT_4046 0.14 +0.1 13,237 - EX28DRAFT_4046 0.16 -0.5 13,471 - EX28DRAFT_4046 0.37 -0.6 13,473 - EX28DRAFT_4046 0.37 -2.0 13,473 - EX28DRAFT_4046 0.37 -0.3 13,473 - EX28DRAFT_4046 0.37 -0.4 13,605 + EX28DRAFT_4046 0.49 +0.2 13,605 + EX28DRAFT_4046 0.49 -0.2 13,605 + EX28DRAFT_4046 0.49 -0.2 13,629 + EX28DRAFT_4046 0.51 +1.3 13,629 + EX28DRAFT_4046 0.51 -0.6 13,757 - EX28DRAFT_4046 0.63 +0.4 13,767 - EX28DRAFT_4046 0.64 +0.0 13,804 - EX28DRAFT_4046 0.67 +0.2 13,985 - EX28DRAFT_4046 0.83 -0.5 14,045 + EX28DRAFT_4046 0.89 +1.0 14,045 + EX28DRAFT_4046 0.89 +0.5 14,045 + EX28DRAFT_4046 0.89 -0.4 14,046 - EX28DRAFT_4046 0.89 -0.2 14,046 - EX28DRAFT_4046 0.89 -0.5 14,046 - EX28DRAFT_4046 0.89 +0.6 14,053 - EX28DRAFT_4046 0.90 -0.1 14,053 - EX28DRAFT_4046 0.90 -0.8 14,055 + EX28DRAFT_4046 0.90 +0.3 14,055 + EX28DRAFT_4046 0.90 -0.8 14,055 + EX28DRAFT_4046 0.90 +1.5 14,128 + -0.0 14,173 - +0.6 14,173 - +1.2 14,555 + EX28DRAFT_4047 0.12 -0.2 14,555 + EX28DRAFT_4047 0.12 -1.4 14,556 - EX28DRAFT_4047 0.12 +0.3 14,692 + EX28DRAFT_4047 0.16 +0.0 14,693 - EX28DRAFT_4047 0.16 -0.7 14,776 + EX28DRAFT_4047 0.18 +0.8 14,777 - EX28DRAFT_4047 0.18 -0.6 14,777 - EX28DRAFT_4047 0.18 -0.3 14,817 - EX28DRAFT_4047 0.19 -0.9 14,873 + EX28DRAFT_4047 0.21 -2.9 14,900 - EX28DRAFT_4047 0.22 -1.5 15,010 + EX28DRAFT_4047 0.25 +0.1 15,011 - EX28DRAFT_4047 0.25 -1.8 15,269 + EX28DRAFT_4047 0.32 +0.7 15,273 - EX28DRAFT_4047 0.32 +0.4 15,308 + EX28DRAFT_4047 0.33 -0.2 15,309 - EX28DRAFT_4047 0.33 +0.2 15,347 - EX28DRAFT_4047 0.34 +0.3 15,392 - EX28DRAFT_4047 0.36 -0.1 15,433 + EX28DRAFT_4047 0.37 -0.4 15,515 - EX28DRAFT_4047 0.39 +0.3 15,750 - EX28DRAFT_4047 0.46 -1.4 15,750 - EX28DRAFT_4047 0.46 -0.2 15,764 + EX28DRAFT_4047 0.46 +0.4 16,028 + EX28DRAFT_4047 0.54 -0.2 16,028 + EX28DRAFT_4047 0.54 -0.2 16,029 - EX28DRAFT_4047 0.54 -0.1 16,029 - EX28DRAFT_4047 0.54 +0.4 16,038 + EX28DRAFT_4047 0.54 -1.6 16,092 - EX28DRAFT_4047 0.56 +0.0 16,092 - EX28DRAFT_4047 0.56 -0.8 16,093 + EX28DRAFT_4047 0.56 +0.1 16,361 + EX28DRAFT_4047 0.63 -0.4 16,362 - EX28DRAFT_4047 0.64 -0.5 16,689 - EX28DRAFT_4047 0.73 +0.1 16,689 - EX28DRAFT_4047 0.73 -0.7 16,689 - EX28DRAFT_4047 0.73 -0.4 16,712 + EX28DRAFT_4047 0.74 +0.5 16,784 - EX28DRAFT_4047 0.76 +0.2 16,856 + EX28DRAFT_4047 0.78 -0.0 16,856 + EX28DRAFT_4047 0.78 +0.7 16,885 + EX28DRAFT_4047 0.79 +0.2 16,886 - EX28DRAFT_4047 0.79 +0.1 16,948 + EX28DRAFT_4047 0.80 +0.1 16,949 - EX28DRAFT_4047 0.80 +0.4 16,978 - EX28DRAFT_4047 0.81 +0.2 16,999 - EX28DRAFT_4047 0.82 +0.3 17,009 + EX28DRAFT_4047 0.82 +1.4 17,009 + EX28DRAFT_4047 0.82 +0.2 17,010 - EX28DRAFT_4047 0.82 +2.4 17,084 - EX28DRAFT_4047 0.84 +0.0 17,111 + EX28DRAFT_4047 0.85 -0.6 17,114 + EX28DRAFT_4047 0.85 +0.4 17,114 + EX28DRAFT_4047 0.85 -0.2 17,115 - EX28DRAFT_4047 0.85 -0.2 17,117 + EX28DRAFT_4047 0.85 -0.9 17,167 + EX28DRAFT_4047 0.87 -0.0 17,168 - EX28DRAFT_4047 0.87 -0.7 17,203 + EX28DRAFT_4047 0.88 -0.2 17,204 - EX28DRAFT_4047 0.88 -0.3 17,204 - EX28DRAFT_4047 0.88 +0.0 17,226 - EX28DRAFT_4047 0.88 +0.4 17,240 + EX28DRAFT_4047 0.89 +0.4 17,240 + EX28DRAFT_4047 0.89 -0.2 17,240 + EX28DRAFT_4047 0.89 +0.9 17,240 + EX28DRAFT_4047 0.89 -0.4 17,240 + EX28DRAFT_4047 0.89 -0.3 17,241 - EX28DRAFT_4047 0.89 -0.0 17,241 - EX28DRAFT_4047 0.89 -0.0 17,329 + -0.3 17,330 - +0.8 17,394 - -0.3 17,445 - -0.7 17,494 - -0.0 17,494 - -0.4 17,494 - +0.2 17,529 - +1.5 17,552 + -0.9 17,552 + -0.2 17,552 + +0.0 17,552 + -0.5 17,552 + +0.3 17,552 + -0.3 17,552 + +0.1 17,552 + -0.1 17,553 - -1.2 17,656 + -0.1 17,656 + +1.2 17,657 - +0.6 17,689 - +0.5 17,708 - +0.1 17,807 + -0.6 17,819 + -0.3 17,819 + -0.1 17,888 + +0.6 17,889 - -0.5 17,895 + -1.1 17,895 + -0.1 18,163 + EX28DRAFT_4048 0.20 +0.1 18,173 + EX28DRAFT_4048 0.21 +0.5 18,198 + EX28DRAFT_4048 0.22 -0.0 18,243 - EX28DRAFT_4048 0.24 +0.1 18,247 - EX28DRAFT_4048 0.25 -0.3 18,256 - EX28DRAFT_4048 0.25 -0.5 18,333 + EX28DRAFT_4048 0.29 -1.1 18,374 + EX28DRAFT_4048 0.31 +0.5 18,401 + EX28DRAFT_4048 0.32 -0.5 18,401 + EX28DRAFT_4048 0.32 -0.4 18,401 + EX28DRAFT_4048 0.32 -0.7 18,402 - EX28DRAFT_4048 0.32 +0.6 18,405 + EX28DRAFT_4048 0.33 -0.6 18,406 - EX28DRAFT_4048 0.33 -0.6 18,406 - EX28DRAFT_4048 0.33 -0.4 18,421 + EX28DRAFT_4048 0.33 -0.5 18,464 + EX28DRAFT_4048 0.35 +0.2 18,464 + EX28DRAFT_4048 0.35 +0.7 18,507 + EX28DRAFT_4048 0.38 -2.8 18,508 - EX28DRAFT_4048 0.38 -0.8
Or see this region's nucleotide sequence