Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_4003

Experiment: M9 with sucrose; no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_4001 and EX28DRAFT_4002 are separated by 47 nucleotidesEX28DRAFT_4002 and EX28DRAFT_4003 overlap by 1 nucleotidesEX28DRAFT_4003 and EX28DRAFT_4004 are separated by 128 nucleotides EX28DRAFT_4001: EX28DRAFT_4001 - phosphate ABC transporter, ATP-binding protein, at 210,446 to 211,219 _4001 EX28DRAFT_4002: EX28DRAFT_4002 - phosphate ABC transporter, permease protein PstA, at 211,267 to 212,157 _4002 EX28DRAFT_4003: EX28DRAFT_4003 - phosphate ABC transporter, permease protein PstC, at 212,157 to 213,116 _4003 EX28DRAFT_4004: EX28DRAFT_4004 - phosphate ABC transporter, phosphate-binding protein, at 213,245 to 214,285 _4004 Position (kb) 212 213 214Strain fitness (log2 ratio) -1 0 1at 211.333 kb on - strandat 212.336 kb on - strand, within EX28DRAFT_4003at 213.189 kb on - strandat 213.237 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control
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211,333 - -0.6
212,336 - EX28DRAFT_4003 0.19 -0.7
213,189 - -0.4
213,237 - +0.6

Or see this region's nucleotide sequence