Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3698 and EX28DRAFT_3699 are separated by 41 nucleotides EX28DRAFT_3699 and EX28DRAFT_3700 overlap by 11 nucleotides
EX28DRAFT_3698: EX28DRAFT_3698 - guanosine monophosphate reductase, eukaryotic, at 368,250 to 369,293
_3698
EX28DRAFT_3699: EX28DRAFT_3699 - Type II secretory pathway, component PulF, at 369,335 to 370,519
_3699
EX28DRAFT_3700: EX28DRAFT_3700 - Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB, at 370,509 to 371,891
_3700
Position (kb) 369
370
371 Strain fitness (log2 ratio) -2
-1
0
1
2 at 368.414 kb on + strand, within EX28DRAFT_3698 at 368.485 kb on - strand, within EX28DRAFT_3698 at 369.038 kb on + strand, within EX28DRAFT_3698 at 369.201 kb on + strand at 369.201 kb on + strand at 369.201 kb on + strand at 369.201 kb on + strand at 369.202 kb on - strand at 369.202 kb on - strand at 369.202 kb on - strand at 369.249 kb on - strand at 369.249 kb on - strand at 369.378 kb on + strand at 369.378 kb on + strand at 369.379 kb on - strand at 369.876 kb on + strand, within EX28DRAFT_3699 at 369.877 kb on - strand, within EX28DRAFT_3699 at 369.877 kb on - strand, within EX28DRAFT_3699 at 369.887 kb on - strand, within EX28DRAFT_3699 at 369.887 kb on - strand, within EX28DRAFT_3699 at 369.948 kb on + strand, within EX28DRAFT_3699 at 370.408 kb on + strand at 370.632 kb on + strand at 370.692 kb on + strand, within EX28DRAFT_3700 at 371.082 kb on + strand, within EX28DRAFT_3700 at 371.099 kb on + strand, within EX28DRAFT_3700 at 371.153 kb on + strand, within EX28DRAFT_3700 at 371.197 kb on + strand, within EX28DRAFT_3700 at 371.197 kb on + strand, within EX28DRAFT_3700 at 371.198 kb on - strand, within EX28DRAFT_3700 at 371.301 kb on - strand, within EX28DRAFT_3700 at 371.485 kb on - strand, within EX28DRAFT_3700
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 368,414 + EX28DRAFT_3698 0.16 -2.4 368,485 - EX28DRAFT_3698 0.23 +0.3 369,038 + EX28DRAFT_3698 0.75 +0.8 369,201 + +0.6 369,201 + +0.9 369,201 + +0.0 369,201 + +1.5 369,202 - +0.2 369,202 - -1.2 369,202 - -0.2 369,249 - -1.1 369,249 - +0.4 369,378 + -1.3 369,378 + -2.1 369,379 - +0.4 369,876 + EX28DRAFT_3699 0.46 +0.1 369,877 - EX28DRAFT_3699 0.46 +1.5 369,877 - EX28DRAFT_3699 0.46 +0.6 369,887 - EX28DRAFT_3699 0.47 +0.4 369,887 - EX28DRAFT_3699 0.47 +0.0 369,948 + EX28DRAFT_3699 0.52 +0.3 370,408 + +0.4 370,632 + +0.9 370,692 + EX28DRAFT_3700 0.13 +1.8 371,082 + EX28DRAFT_3700 0.41 +0.3 371,099 + EX28DRAFT_3700 0.43 -0.2 371,153 + EX28DRAFT_3700 0.47 +0.5 371,197 + EX28DRAFT_3700 0.50 +0.2 371,197 + EX28DRAFT_3700 0.50 +0.1 371,198 - EX28DRAFT_3700 0.50 -0.4 371,301 - EX28DRAFT_3700 0.57 -0.0 371,485 - EX28DRAFT_3700 0.71 -0.2
Or see this region's nucleotide sequence