Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_3448

Experiment: M9 with sucrose; no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_3446 and EX28DRAFT_3447 are separated by 85 nucleotidesEX28DRAFT_3447 and EX28DRAFT_3448 are separated by 73 nucleotidesEX28DRAFT_3448 and EX28DRAFT_3449 are separated by 71 nucleotides EX28DRAFT_3446: EX28DRAFT_3446 - aspartate carbamoyltransferase (EC 2.1.3.2), at 118,941 to 119,873 _3446 EX28DRAFT_3447: EX28DRAFT_3447 - PyrBI operon leader peptide, at 119,959 to 120,039 _3447 EX28DRAFT_3448: EX28DRAFT_3448 - transcriptional regulator, ArgR family, at 120,113 to 120,601 _3448 EX28DRAFT_3449: EX28DRAFT_3449 - Predicted membrane protein, at 120,673 to 122,076 _3449 Position (kb) 120 121Strain fitness (log2 ratio) -2 -1 0 1at 119.878 kb on - strandat 120.043 kb on - strandat 120.043 kb on - strandat 120.085 kb on - strandat 120.105 kb on + strandat 120.111 kb on + strandat 120.146 kb on - strandat 120.193 kb on + strand, within EX28DRAFT_3448at 120.247 kb on + strand, within EX28DRAFT_3448at 120.248 kb on - strand, within EX28DRAFT_3448at 120.281 kb on - strand, within EX28DRAFT_3448at 120.293 kb on - strand, within EX28DRAFT_3448at 120.337 kb on + strand, within EX28DRAFT_3448at 120.381 kb on + strand, within EX28DRAFT_3448at 120.513 kb on + strand, within EX28DRAFT_3448at 120.513 kb on + strand, within EX28DRAFT_3448at 120.513 kb on + strand, within EX28DRAFT_3448at 120.513 kb on + strand, within EX28DRAFT_3448at 120.514 kb on - strand, within EX28DRAFT_3448at 120.514 kb on - strand, within EX28DRAFT_3448at 120.514 kb on - strand, within EX28DRAFT_3448at 120.554 kb on + strandat 120.554 kb on + strandat 120.555 kb on - strandat 120.555 kb on - strandat 120.555 kb on - strandat 120.592 kb on + strandat 120.592 kb on + strandat 120.592 kb on + strandat 120.592 kb on + strandat 120.617 kb on - strandat 120.761 kb on + strandat 120.761 kb on + strandat 120.971 kb on + strand, within EX28DRAFT_3449

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control
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119,878 - -2.4
120,043 - -0.3
120,043 - +0.2
120,085 - -0.4
120,105 + -0.1
120,111 + -0.5
120,146 - -0.3
120,193 + EX28DRAFT_3448 0.16 -0.8
120,247 + EX28DRAFT_3448 0.27 -0.6
120,248 - EX28DRAFT_3448 0.28 +0.1
120,281 - EX28DRAFT_3448 0.34 -0.6
120,293 - EX28DRAFT_3448 0.37 -0.3
120,337 + EX28DRAFT_3448 0.46 -0.3
120,381 + EX28DRAFT_3448 0.55 -0.5
120,513 + EX28DRAFT_3448 0.82 -0.6
120,513 + EX28DRAFT_3448 0.82 -0.2
120,513 + EX28DRAFT_3448 0.82 +0.4
120,513 + EX28DRAFT_3448 0.82 -0.2
120,514 - EX28DRAFT_3448 0.82 -0.1
120,514 - EX28DRAFT_3448 0.82 -0.7
120,514 - EX28DRAFT_3448 0.82 +0.1
120,554 + -0.8
120,554 + +0.2
120,555 - +0.2
120,555 - -0.2
120,555 - -0.2
120,592 + -0.3
120,592 + +0.1
120,592 + -0.8
120,592 + -0.0
120,617 - +0.3
120,761 + +0.3
120,761 + -1.1
120,971 + EX28DRAFT_3449 0.21 +0.2

Or see this region's nucleotide sequence