Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3185 and EX28DRAFT_3186 are separated by 251 nucleotides EX28DRAFT_3186 and EX28DRAFT_3187 are separated by 20 nucleotides EX28DRAFT_3187 and EX28DRAFT_3188 are separated by 10 nucleotides
EX28DRAFT_3185: EX28DRAFT_3185 - transcriptional regulator, DeoR family, at 486,059 to 486,862
_3185
EX28DRAFT_3186: EX28DRAFT_3186 - D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit, at 487,114 to 488,409
_3186
EX28DRAFT_3187: EX28DRAFT_3187 - PTS system, mannose/fructose/sorbose family, IIB component, at 488,430 to 488,903
_3187
EX28DRAFT_3188: EX28DRAFT_3188 - Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC, at 488,914 to 489,693
_3188
Position (kb) 487
488
489 Strain fitness (log2 ratio) -2
-1
0
1 at 486.134 kb on - strand at 486.215 kb on - strand, within EX28DRAFT_3185 at 486.508 kb on - strand, within EX28DRAFT_3185 at 486.596 kb on - strand, within EX28DRAFT_3185 at 486.947 kb on - strand at 486.947 kb on - strand at 486.951 kb on - strand at 487.040 kb on - strand at 487.092 kb on - strand at 487.147 kb on - strand at 487.171 kb on + strand at 487.171 kb on + strand at 487.171 kb on + strand at 487.621 kb on + strand, within EX28DRAFT_3186 at 487.773 kb on + strand, within EX28DRAFT_3186 at 487.873 kb on + strand, within EX28DRAFT_3186 at 488.004 kb on - strand, within EX28DRAFT_3186 at 488.101 kb on + strand, within EX28DRAFT_3186 at 488.102 kb on - strand, within EX28DRAFT_3186 at 488.117 kb on - strand, within EX28DRAFT_3186 at 488.162 kb on - strand, within EX28DRAFT_3186 at 488.182 kb on + strand, within EX28DRAFT_3186 at 488.272 kb on + strand, within EX28DRAFT_3186 at 488.293 kb on - strand at 488.357 kb on + strand at 488.357 kb on + strand at 488.358 kb on - strand at 488.358 kb on - strand at 488.358 kb on - strand at 488.488 kb on + strand, within EX28DRAFT_3187 at 488.747 kb on + strand, within EX28DRAFT_3187 at 488.747 kb on + strand, within EX28DRAFT_3187 at 488.748 kb on - strand, within EX28DRAFT_3187 at 489.080 kb on + strand, within EX28DRAFT_3188 at 489.243 kb on + strand, within EX28DRAFT_3188 at 489.309 kb on + strand, within EX28DRAFT_3188 at 489.309 kb on + strand, within EX28DRAFT_3188 at 489.334 kb on + strand, within EX28DRAFT_3188 at 489.334 kb on + strand, within EX28DRAFT_3188 at 489.335 kb on - strand, within EX28DRAFT_3188 at 489.365 kb on - strand, within EX28DRAFT_3188 at 489.365 kb on - strand, within EX28DRAFT_3188 at 489.392 kb on - strand, within EX28DRAFT_3188
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 486,134 - +0.3 486,215 - EX28DRAFT_3185 0.19 -0.3 486,508 - EX28DRAFT_3185 0.56 -0.3 486,596 - EX28DRAFT_3185 0.67 +0.5 486,947 - -0.3 486,947 - +0.4 486,951 - +1.0 487,040 - +0.0 487,092 - -0.1 487,147 - +1.2 487,171 + +0.6 487,171 + +0.3 487,171 + -2.3 487,621 + EX28DRAFT_3186 0.39 -0.6 487,773 + EX28DRAFT_3186 0.51 +0.7 487,873 + EX28DRAFT_3186 0.59 +0.7 488,004 - EX28DRAFT_3186 0.69 -0.8 488,101 + EX28DRAFT_3186 0.76 +1.1 488,102 - EX28DRAFT_3186 0.76 -0.3 488,117 - EX28DRAFT_3186 0.77 +0.0 488,162 - EX28DRAFT_3186 0.81 +0.7 488,182 + EX28DRAFT_3186 0.82 +0.3 488,272 + EX28DRAFT_3186 0.89 +0.1 488,293 - -0.1 488,357 + +0.1 488,357 + -2.0 488,358 - +0.1 488,358 - +0.2 488,358 - +0.3 488,488 + EX28DRAFT_3187 0.12 -0.1 488,747 + EX28DRAFT_3187 0.67 -0.9 488,747 + EX28DRAFT_3187 0.67 +0.1 488,748 - EX28DRAFT_3187 0.67 +1.2 489,080 + EX28DRAFT_3188 0.21 +0.3 489,243 + EX28DRAFT_3188 0.42 -0.6 489,309 + EX28DRAFT_3188 0.51 -1.0 489,309 + EX28DRAFT_3188 0.51 +1.0 489,334 + EX28DRAFT_3188 0.54 +0.1 489,334 + EX28DRAFT_3188 0.54 +0.5 489,335 - EX28DRAFT_3188 0.54 -0.2 489,365 - EX28DRAFT_3188 0.58 -0.6 489,365 - EX28DRAFT_3188 0.58 -0.4 489,392 - EX28DRAFT_3188 0.61 +0.1
Or see this region's nucleotide sequence