Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3157 and EX28DRAFT_3158 are separated by 271 nucleotides EX28DRAFT_3158 and EX28DRAFT_3159 are separated by 86 nucleotides
EX28DRAFT_3157: EX28DRAFT_3157 - integral membrane protein, TerC family, at 458,677 to 459,645
_3157
EX28DRAFT_3158: EX28DRAFT_3158 - Na+/serine symporter, at 459,917 to 461,158
_3158
EX28DRAFT_3159: EX28DRAFT_3159 - Altronate dehydratase, at 461,245 to 462,732
_3159
Position (kb) 459
460
461
462 Strain fitness (log2 ratio) -2
-1
0
1 at 459.026 kb on - strand, within EX28DRAFT_3157 at 459.533 kb on - strand, within EX28DRAFT_3157 at 459.591 kb on - strand at 459.643 kb on + strand at 459.713 kb on - strand at 459.796 kb on + strand at 459.846 kb on - strand at 459.849 kb on + strand at 459.912 kb on + strand at 459.912 kb on + strand at 459.912 kb on + strand at 459.913 kb on - strand at 459.913 kb on - strand at 459.913 kb on - strand at 459.916 kb on + strand at 459.916 kb on + strand at 459.916 kb on + strand at 460.176 kb on - strand, within EX28DRAFT_3158 at 460.220 kb on - strand, within EX28DRAFT_3158 at 460.358 kb on + strand, within EX28DRAFT_3158 at 460.359 kb on - strand, within EX28DRAFT_3158 at 460.359 kb on - strand, within EX28DRAFT_3158 at 460.359 kb on - strand, within EX28DRAFT_3158 at 460.463 kb on - strand, within EX28DRAFT_3158 at 460.588 kb on + strand, within EX28DRAFT_3158 at 460.589 kb on - strand, within EX28DRAFT_3158 at 460.589 kb on - strand, within EX28DRAFT_3158 at 460.689 kb on + strand, within EX28DRAFT_3158 at 460.690 kb on - strand, within EX28DRAFT_3158 at 460.692 kb on - strand, within EX28DRAFT_3158 at 460.692 kb on - strand, within EX28DRAFT_3158 at 460.775 kb on + strand, within EX28DRAFT_3158 at 460.775 kb on + strand, within EX28DRAFT_3158 at 460.776 kb on - strand, within EX28DRAFT_3158 at 460.982 kb on - strand, within EX28DRAFT_3158 at 460.984 kb on + strand, within EX28DRAFT_3158 at 460.984 kb on + strand, within EX28DRAFT_3158 at 460.984 kb on + strand, within EX28DRAFT_3158 at 460.984 kb on + strand, within EX28DRAFT_3158 at 460.984 kb on + strand, within EX28DRAFT_3158 at 460.985 kb on - strand, within EX28DRAFT_3158 at 460.985 kb on - strand, within EX28DRAFT_3158 at 461.036 kb on - strand at 461.156 kb on + strand at 461.162 kb on + strand at 461.163 kb on - strand at 461.163 kb on - strand at 461.208 kb on + strand at 461.208 kb on + strand at 461.209 kb on - strand at 461.246 kb on + strand at 461.247 kb on - strand at 461.335 kb on - strand at 461.335 kb on - strand at 461.337 kb on + strand at 461.674 kb on - strand, within EX28DRAFT_3159 at 461.741 kb on + strand, within EX28DRAFT_3159 at 461.814 kb on + strand, within EX28DRAFT_3159 at 461.875 kb on + strand, within EX28DRAFT_3159 at 461.875 kb on + strand, within EX28DRAFT_3159 at 461.876 kb on - strand, within EX28DRAFT_3159 at 461.879 kb on + strand, within EX28DRAFT_3159 at 462.009 kb on - strand, within EX28DRAFT_3159 at 462.069 kb on + strand, within EX28DRAFT_3159
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 459,026 - EX28DRAFT_3157 0.36 +0.8 459,533 - EX28DRAFT_3157 0.88 -0.4 459,591 - -0.8 459,643 + +1.5 459,713 - -0.4 459,796 + +0.7 459,846 - -1.0 459,849 + +1.2 459,912 + -0.2 459,912 + -0.3 459,912 + -0.2 459,913 - +0.7 459,913 - +0.2 459,913 - +1.1 459,916 + -2.6 459,916 + -0.1 459,916 + +0.7 460,176 - EX28DRAFT_3158 0.21 +0.1 460,220 - EX28DRAFT_3158 0.24 +0.4 460,358 + EX28DRAFT_3158 0.36 +0.2 460,359 - EX28DRAFT_3158 0.36 -0.1 460,359 - EX28DRAFT_3158 0.36 -1.3 460,359 - EX28DRAFT_3158 0.36 -0.7 460,463 - EX28DRAFT_3158 0.44 +0.7 460,588 + EX28DRAFT_3158 0.54 -0.8 460,589 - EX28DRAFT_3158 0.54 +0.8 460,589 - EX28DRAFT_3158 0.54 -0.7 460,689 + EX28DRAFT_3158 0.62 -0.4 460,690 - EX28DRAFT_3158 0.62 -0.1 460,692 - EX28DRAFT_3158 0.62 -0.0 460,692 - EX28DRAFT_3158 0.62 -0.1 460,775 + EX28DRAFT_3158 0.69 +1.3 460,775 + EX28DRAFT_3158 0.69 -0.1 460,776 - EX28DRAFT_3158 0.69 +0.8 460,982 - EX28DRAFT_3158 0.86 -0.0 460,984 + EX28DRAFT_3158 0.86 +1.2 460,984 + EX28DRAFT_3158 0.86 +0.2 460,984 + EX28DRAFT_3158 0.86 +1.0 460,984 + EX28DRAFT_3158 0.86 +0.2 460,984 + EX28DRAFT_3158 0.86 -0.1 460,985 - EX28DRAFT_3158 0.86 +1.1 460,985 - EX28DRAFT_3158 0.86 -0.3 461,036 - -0.3 461,156 + -0.2 461,162 + +0.2 461,163 - +0.2 461,163 - -0.1 461,208 + -0.2 461,208 + +1.0 461,209 - +0.0 461,246 + +0.9 461,247 - +0.0 461,335 - +0.1 461,335 - -0.1 461,337 + -0.1 461,674 - EX28DRAFT_3159 0.29 -0.1 461,741 + EX28DRAFT_3159 0.33 +0.1 461,814 + EX28DRAFT_3159 0.38 +0.2 461,875 + EX28DRAFT_3159 0.42 +0.2 461,875 + EX28DRAFT_3159 0.42 +0.8 461,876 - EX28DRAFT_3159 0.42 -0.3 461,879 + EX28DRAFT_3159 0.43 +0.1 462,009 - EX28DRAFT_3159 0.51 +0.5 462,069 + EX28DRAFT_3159 0.55 +0.2
Or see this region's nucleotide sequence