Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3042 and EX28DRAFT_3043 are separated by 1 nucleotides EX28DRAFT_3043 and EX28DRAFT_3044 are separated by 42 nucleotides EX28DRAFT_3044 and EX28DRAFT_3045 are separated by 4 nucleotides EX28DRAFT_3045 and EX28DRAFT_3046 are separated by 251 nucleotides
EX28DRAFT_3042: EX28DRAFT_3042 - hypothetical protein, at 350,747 to 351,151
_3042
EX28DRAFT_3043: EX28DRAFT_3043 - hypothetical protein, at 351,153 to 351,602
_3043
EX28DRAFT_3044: EX28DRAFT_3044 - TonB system transport protein ExbD, group 1, at 351,645 to 352,070
_3044
EX28DRAFT_3045: EX28DRAFT_3045 - tonB-system energizer ExbB, at 352,075 to 352,806
_3045
EX28DRAFT_3046: EX28DRAFT_3046 - cystathionine beta-lyase, bacterial, at 353,058 to 354,245
_3046
Position (kb) 352
353 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 351.215 kb on + strand, within EX28DRAFT_3043 at 351.216 kb on - strand, within EX28DRAFT_3043 at 351.273 kb on - strand, within EX28DRAFT_3043 at 351.273 kb on - strand, within EX28DRAFT_3043 at 351.275 kb on + strand, within EX28DRAFT_3043 at 351.275 kb on + strand, within EX28DRAFT_3043 at 351.276 kb on - strand, within EX28DRAFT_3043 at 351.369 kb on + strand, within EX28DRAFT_3043 at 351.395 kb on - strand, within EX28DRAFT_3043 at 351.395 kb on - strand, within EX28DRAFT_3043 at 351.395 kb on - strand, within EX28DRAFT_3043 at 351.395 kb on - strand, within EX28DRAFT_3043 at 351.447 kb on + strand, within EX28DRAFT_3043 at 351.447 kb on + strand, within EX28DRAFT_3043 at 351.518 kb on + strand, within EX28DRAFT_3043 at 351.718 kb on - strand, within EX28DRAFT_3044 at 351.791 kb on + strand, within EX28DRAFT_3044 at 351.792 kb on - strand, within EX28DRAFT_3044 at 351.877 kb on + strand, within EX28DRAFT_3044 at 351.878 kb on - strand, within EX28DRAFT_3044 at 351.882 kb on - strand, within EX28DRAFT_3044 at 351.882 kb on - strand, within EX28DRAFT_3044 at 352.071 kb on - strand at 352.071 kb on - strand at 352.093 kb on - strand at 352.223 kb on + strand, within EX28DRAFT_3045 at 352.223 kb on + strand, within EX28DRAFT_3045 at 352.223 kb on + strand, within EX28DRAFT_3045 at 352.223 kb on + strand, within EX28DRAFT_3045 at 352.224 kb on - strand, within EX28DRAFT_3045 at 352.642 kb on - strand, within EX28DRAFT_3045 at 352.760 kb on + strand at 352.760 kb on + strand at 352.761 kb on - strand at 352.761 kb on - strand at 352.844 kb on + strand at 352.844 kb on + strand at 352.845 kb on - strand at 352.845 kb on - strand at 352.845 kb on - strand at 352.847 kb on + strand at 352.847 kb on + strand at 352.848 kb on - strand at 352.885 kb on + strand at 352.889 kb on - strand at 352.977 kb on + strand at 353.037 kb on - strand at 353.366 kb on + strand, within EX28DRAFT_3046 at 353.431 kb on + strand, within EX28DRAFT_3046 at 353.486 kb on + strand, within EX28DRAFT_3046 at 353.663 kb on + strand, within EX28DRAFT_3046 at 353.663 kb on + strand, within EX28DRAFT_3046 at 353.688 kb on + strand, within EX28DRAFT_3046 at 353.805 kb on + strand, within EX28DRAFT_3046 at 353.805 kb on + strand, within EX28DRAFT_3046 at 353.806 kb on - strand, within EX28DRAFT_3046 at 353.806 kb on - strand, within EX28DRAFT_3046
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 351,215 + EX28DRAFT_3043 0.14 +0.2 351,216 - EX28DRAFT_3043 0.14 +0.2 351,273 - EX28DRAFT_3043 0.27 +0.1 351,273 - EX28DRAFT_3043 0.27 -0.0 351,275 + EX28DRAFT_3043 0.27 -0.0 351,275 + EX28DRAFT_3043 0.27 +0.2 351,276 - EX28DRAFT_3043 0.27 -1.0 351,369 + EX28DRAFT_3043 0.48 -0.3 351,395 - EX28DRAFT_3043 0.54 -0.1 351,395 - EX28DRAFT_3043 0.54 +1.6 351,395 - EX28DRAFT_3043 0.54 -1.8 351,395 - EX28DRAFT_3043 0.54 -0.3 351,447 + EX28DRAFT_3043 0.65 +1.3 351,447 + EX28DRAFT_3043 0.65 +0.1 351,518 + EX28DRAFT_3043 0.81 +0.4 351,718 - EX28DRAFT_3044 0.17 -0.3 351,791 + EX28DRAFT_3044 0.34 -1.8 351,792 - EX28DRAFT_3044 0.35 -0.7 351,877 + EX28DRAFT_3044 0.54 -0.2 351,878 - EX28DRAFT_3044 0.55 -0.3 351,882 - EX28DRAFT_3044 0.56 -0.2 351,882 - EX28DRAFT_3044 0.56 -0.4 352,071 - +0.2 352,071 - +0.2 352,093 - -0.7 352,223 + EX28DRAFT_3045 0.20 -1.6 352,223 + EX28DRAFT_3045 0.20 -2.1 352,223 + EX28DRAFT_3045 0.20 -1.2 352,223 + EX28DRAFT_3045 0.20 -2.2 352,224 - EX28DRAFT_3045 0.20 -0.1 352,642 - EX28DRAFT_3045 0.77 -0.1 352,760 + -0.9 352,760 + -0.3 352,761 - -0.4 352,761 - -0.5 352,844 + -1.4 352,844 + -1.1 352,845 - +0.2 352,845 - -1.6 352,845 - +0.5 352,847 + -0.2 352,847 + +0.1 352,848 - +0.2 352,885 + +0.2 352,889 - +0.6 352,977 + -0.9 353,037 - -2.4 353,366 + EX28DRAFT_3046 0.26 -5.0 353,431 + EX28DRAFT_3046 0.31 -2.8 353,486 + EX28DRAFT_3046 0.36 -3.4 353,663 + EX28DRAFT_3046 0.51 -1.9 353,663 + EX28DRAFT_3046 0.51 -5.3 353,688 + EX28DRAFT_3046 0.53 -2.4 353,805 + EX28DRAFT_3046 0.63 -3.3 353,805 + EX28DRAFT_3046 0.63 -4.0 353,806 - EX28DRAFT_3046 0.63 -4.6 353,806 - EX28DRAFT_3046 0.63 -4.3
Or see this region's nucleotide sequence