Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_2764

Experiment: M9 with sucrose; no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_2763 and EX28DRAFT_2764 overlap by 17 nucleotidesEX28DRAFT_2764 and EX28DRAFT_2765 are separated by 9 nucleotides EX28DRAFT_2763: EX28DRAFT_2763 - glycine betaine/L-proline transport ATP binding subunit, at 70,227 to 71,438 _2763 EX28DRAFT_2764: EX28DRAFT_2764 - ABC-type proline/glycine betaine transport system, permease component, at 71,422 to 72,492 _2764 EX28DRAFT_2765: EX28DRAFT_2765 - ABC-type proline/glycine betaine transport systems, periplasmic components, at 72,502 to 73,497 _2765 Position (kb) 71 72 73Strain fitness (log2 ratio) -1 0 1at 70.510 kb on + strand, within EX28DRAFT_2763at 70.769 kb on + strand, within EX28DRAFT_2763at 70.780 kb on + strand, within EX28DRAFT_2763at 70.780 kb on + strand, within EX28DRAFT_2763at 70.781 kb on - strand, within EX28DRAFT_2763at 70.783 kb on + strand, within EX28DRAFT_2763at 70.917 kb on - strand, within EX28DRAFT_2763at 71.061 kb on - strand, within EX28DRAFT_2763at 71.093 kb on + strand, within EX28DRAFT_2763at 71.093 kb on + strand, within EX28DRAFT_2763at 71.361 kb on + strandat 71.596 kb on - strand, within EX28DRAFT_2764at 71.695 kb on + strand, within EX28DRAFT_2764at 71.695 kb on + strand, within EX28DRAFT_2764at 71.695 kb on + strand, within EX28DRAFT_2764at 71.695 kb on + strand, within EX28DRAFT_2764at 71.959 kb on - strand, within EX28DRAFT_2764at 72.005 kb on - strand, within EX28DRAFT_2764at 72.066 kb on + strand, within EX28DRAFT_2764at 72.067 kb on - strand, within EX28DRAFT_2764at 72.067 kb on - strand, within EX28DRAFT_2764at 72.491 kb on - strandat 72.510 kb on + strandat 72.510 kb on + strandat 72.510 kb on + strandat 72.510 kb on + strandat 72.510 kb on + strandat 72.510 kb on + strandat 72.511 kb on - strandat 72.511 kb on - strandat 72.511 kb on - strandat 72.708 kb on - strand, within EX28DRAFT_2765at 72.708 kb on - strand, within EX28DRAFT_2765at 72.781 kb on + strand, within EX28DRAFT_2765at 72.782 kb on - strand, within EX28DRAFT_2765at 72.782 kb on - strand, within EX28DRAFT_2765at 73.060 kb on + strand, within EX28DRAFT_2765at 73.061 kb on - strand, within EX28DRAFT_2765at 73.117 kb on + strand, within EX28DRAFT_2765at 73.118 kb on - strand, within EX28DRAFT_2765at 73.118 kb on - strand, within EX28DRAFT_2765at 73.121 kb on - strand, within EX28DRAFT_2765at 73.279 kb on - strand, within EX28DRAFT_2765

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control
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70,510 + EX28DRAFT_2763 0.23 +0.3
70,769 + EX28DRAFT_2763 0.45 +0.1
70,780 + EX28DRAFT_2763 0.46 -0.4
70,780 + EX28DRAFT_2763 0.46 +0.1
70,781 - EX28DRAFT_2763 0.46 -0.1
70,783 + EX28DRAFT_2763 0.46 -0.1
70,917 - EX28DRAFT_2763 0.57 +0.1
71,061 - EX28DRAFT_2763 0.69 -0.3
71,093 + EX28DRAFT_2763 0.71 +0.2
71,093 + EX28DRAFT_2763 0.71 -0.6
71,361 + +0.2
71,596 - EX28DRAFT_2764 0.16 -0.9
71,695 + EX28DRAFT_2764 0.25 +0.1
71,695 + EX28DRAFT_2764 0.25 +0.3
71,695 + EX28DRAFT_2764 0.25 -0.4
71,695 + EX28DRAFT_2764 0.25 +0.4
71,959 - EX28DRAFT_2764 0.50 -0.1
72,005 - EX28DRAFT_2764 0.54 +0.0
72,066 + EX28DRAFT_2764 0.60 -0.9
72,067 - EX28DRAFT_2764 0.60 -0.5
72,067 - EX28DRAFT_2764 0.60 -0.6
72,491 - +1.1
72,510 + -0.3
72,510 + +0.1
72,510 + +0.0
72,510 + +0.1
72,510 + +0.2
72,510 + -0.1
72,511 - +0.2
72,511 - -0.2
72,511 - +0.1
72,708 - EX28DRAFT_2765 0.21 +0.8
72,708 - EX28DRAFT_2765 0.21 -0.0
72,781 + EX28DRAFT_2765 0.28 +1.0
72,782 - EX28DRAFT_2765 0.28 +0.4
72,782 - EX28DRAFT_2765 0.28 +0.3
73,060 + EX28DRAFT_2765 0.56 +0.0
73,061 - EX28DRAFT_2765 0.56 -0.2
73,117 + EX28DRAFT_2765 0.62 -0.0
73,118 - EX28DRAFT_2765 0.62 +0.2
73,118 - EX28DRAFT_2765 0.62 +0.1
73,121 - EX28DRAFT_2765 0.62 +0.1
73,279 - EX28DRAFT_2765 0.78 +0.6

Or see this region's nucleotide sequence