Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2763 and EX28DRAFT_2764 overlap by 17 nucleotides EX28DRAFT_2764 and EX28DRAFT_2765 are separated by 9 nucleotides
EX28DRAFT_2763: EX28DRAFT_2763 - glycine betaine/L-proline transport ATP binding subunit, at 70,227 to 71,438
_2763
EX28DRAFT_2764: EX28DRAFT_2764 - ABC-type proline/glycine betaine transport system, permease component, at 71,422 to 72,492
_2764
EX28DRAFT_2765: EX28DRAFT_2765 - ABC-type proline/glycine betaine transport systems, periplasmic components, at 72,502 to 73,497
_2765
Position (kb)
71
72
73 Strain fitness (log2 ratio)
-1
0
1 at 70.510 kb on + strand, within EX28DRAFT_2763 at 70.769 kb on + strand, within EX28DRAFT_2763 at 70.780 kb on + strand, within EX28DRAFT_2763 at 70.780 kb on + strand, within EX28DRAFT_2763 at 70.781 kb on - strand, within EX28DRAFT_2763 at 70.783 kb on + strand, within EX28DRAFT_2763 at 70.917 kb on - strand, within EX28DRAFT_2763 at 71.061 kb on - strand, within EX28DRAFT_2763 at 71.093 kb on + strand, within EX28DRAFT_2763 at 71.093 kb on + strand, within EX28DRAFT_2763 at 71.361 kb on + strand at 71.596 kb on - strand, within EX28DRAFT_2764 at 71.695 kb on + strand, within EX28DRAFT_2764 at 71.695 kb on + strand, within EX28DRAFT_2764 at 71.695 kb on + strand, within EX28DRAFT_2764 at 71.695 kb on + strand, within EX28DRAFT_2764 at 71.959 kb on - strand, within EX28DRAFT_2764 at 72.005 kb on - strand, within EX28DRAFT_2764 at 72.066 kb on + strand, within EX28DRAFT_2764 at 72.067 kb on - strand, within EX28DRAFT_2764 at 72.067 kb on - strand, within EX28DRAFT_2764 at 72.491 kb on - strand at 72.510 kb on + strand at 72.510 kb on + strand at 72.510 kb on + strand at 72.510 kb on + strand at 72.510 kb on + strand at 72.510 kb on + strand at 72.511 kb on - strand at 72.511 kb on - strand at 72.511 kb on - strand at 72.708 kb on - strand, within EX28DRAFT_2765 at 72.708 kb on - strand, within EX28DRAFT_2765 at 72.781 kb on + strand, within EX28DRAFT_2765 at 72.782 kb on - strand, within EX28DRAFT_2765 at 72.782 kb on - strand, within EX28DRAFT_2765 at 73.060 kb on + strand, within EX28DRAFT_2765 at 73.061 kb on - strand, within EX28DRAFT_2765 at 73.117 kb on + strand, within EX28DRAFT_2765 at 73.118 kb on - strand, within EX28DRAFT_2765 at 73.118 kb on - strand, within EX28DRAFT_2765 at 73.121 kb on - strand, within EX28DRAFT_2765 at 73.279 kb on - strand, within EX28DRAFT_2765
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 70,510 + EX28DRAFT_2763 0.23 +0.3 70,769 + EX28DRAFT_2763 0.45 +0.1 70,780 + EX28DRAFT_2763 0.46 -0.4 70,780 + EX28DRAFT_2763 0.46 +0.1 70,781 - EX28DRAFT_2763 0.46 -0.1 70,783 + EX28DRAFT_2763 0.46 -0.1 70,917 - EX28DRAFT_2763 0.57 +0.1 71,061 - EX28DRAFT_2763 0.69 -0.3 71,093 + EX28DRAFT_2763 0.71 +0.2 71,093 + EX28DRAFT_2763 0.71 -0.6 71,361 + +0.2 71,596 - EX28DRAFT_2764 0.16 -0.9 71,695 + EX28DRAFT_2764 0.25 +0.1 71,695 + EX28DRAFT_2764 0.25 +0.3 71,695 + EX28DRAFT_2764 0.25 -0.4 71,695 + EX28DRAFT_2764 0.25 +0.4 71,959 - EX28DRAFT_2764 0.50 -0.1 72,005 - EX28DRAFT_2764 0.54 +0.0 72,066 + EX28DRAFT_2764 0.60 -0.9 72,067 - EX28DRAFT_2764 0.60 -0.5 72,067 - EX28DRAFT_2764 0.60 -0.6 72,491 - +1.1 72,510 + -0.3 72,510 + +0.1 72,510 + +0.0 72,510 + +0.1 72,510 + +0.2 72,510 + -0.1 72,511 - +0.2 72,511 - -0.2 72,511 - +0.1 72,708 - EX28DRAFT_2765 0.21 +0.8 72,708 - EX28DRAFT_2765 0.21 -0.0 72,781 + EX28DRAFT_2765 0.28 +1.0 72,782 - EX28DRAFT_2765 0.28 +0.4 72,782 - EX28DRAFT_2765 0.28 +0.3 73,060 + EX28DRAFT_2765 0.56 +0.0 73,061 - EX28DRAFT_2765 0.56 -0.2 73,117 + EX28DRAFT_2765 0.62 -0.0 73,118 - EX28DRAFT_2765 0.62 +0.2 73,118 - EX28DRAFT_2765 0.62 +0.1 73,121 - EX28DRAFT_2765 0.62 +0.1 73,279 - EX28DRAFT_2765 0.78 +0.6
Or see this region's nucleotide sequence