Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2748 and EX28DRAFT_2749 are separated by 106 nucleotides EX28DRAFT_2749 and EX28DRAFT_2750 are separated by 320 nucleotides
EX28DRAFT_2748: EX28DRAFT_2748 - Succinyl-CoA synthetase, alpha subunit, at 58,741 to 60,282
_2748
EX28DRAFT_2749: EX28DRAFT_2749 - FOG: Ankyrin repeat, at 60,389 to 60,994
_2749
EX28DRAFT_2750: EX28DRAFT_2750 - Transcriptional regulator, at 61,315 to 62,244
_2750
Position (kb) 60
61 Strain fitness (log2 ratio) -2
-1
0
1
2 at 60.075 kb on + strand, within EX28DRAFT_2748 at 60.079 kb on + strand, within EX28DRAFT_2748 at 60.079 kb on + strand, within EX28DRAFT_2748 at 60.080 kb on - strand, within EX28DRAFT_2748 at 60.080 kb on - strand, within EX28DRAFT_2748 at 60.142 kb on + strand at 60.146 kb on - strand at 60.146 kb on - strand at 60.229 kb on + strand at 60.248 kb on + strand at 60.248 kb on + strand at 60.249 kb on - strand at 60.262 kb on + strand at 60.340 kb on - strand at 60.419 kb on + strand at 60.420 kb on - strand at 60.468 kb on + strand, within EX28DRAFT_2749 at 60.840 kb on + strand, within EX28DRAFT_2749 at 60.841 kb on - strand, within EX28DRAFT_2749 at 60.841 kb on - strand, within EX28DRAFT_2749 at 60.862 kb on + strand, within EX28DRAFT_2749 at 60.862 kb on + strand, within EX28DRAFT_2749 at 60.865 kb on + strand, within EX28DRAFT_2749 at 60.902 kb on - strand, within EX28DRAFT_2749 at 60.995 kb on - strand at 61.047 kb on - strand at 61.053 kb on - strand at 61.191 kb on + strand at 61.192 kb on - strand at 61.281 kb on + strand at 61.282 kb on - strand at 61.314 kb on + strand at 61.520 kb on - strand, within EX28DRAFT_2750 at 61.576 kb on - strand, within EX28DRAFT_2750 at 61.615 kb on - strand, within EX28DRAFT_2750 at 61.631 kb on - strand, within EX28DRAFT_2750 at 61.715 kb on - strand, within EX28DRAFT_2750
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 60,075 + EX28DRAFT_2748 0.87 +0.0 60,079 + EX28DRAFT_2748 0.87 -0.9 60,079 + EX28DRAFT_2748 0.87 -0.0 60,080 - EX28DRAFT_2748 0.87 +0.6 60,080 - EX28DRAFT_2748 0.87 +0.1 60,142 + -0.1 60,146 - -0.4 60,146 - -0.3 60,229 + -0.1 60,248 + +0.1 60,248 + -0.6 60,249 - +0.4 60,262 + +1.8 60,340 - -0.4 60,419 + -0.9 60,420 - +0.2 60,468 + EX28DRAFT_2749 0.13 -0.7 60,840 + EX28DRAFT_2749 0.74 +0.1 60,841 - EX28DRAFT_2749 0.75 -0.4 60,841 - EX28DRAFT_2749 0.75 -0.6 60,862 + EX28DRAFT_2749 0.78 +1.1 60,862 + EX28DRAFT_2749 0.78 +0.1 60,865 + EX28DRAFT_2749 0.79 -1.3 60,902 - EX28DRAFT_2749 0.85 -2.5 60,995 - +1.0 61,047 - +0.4 61,053 - +0.3 61,191 + -2.2 61,192 - +0.7 61,281 + +0.4 61,282 - +0.0 61,314 + +0.5 61,520 - EX28DRAFT_2750 0.22 +0.5 61,576 - EX28DRAFT_2750 0.28 -1.3 61,615 - EX28DRAFT_2750 0.32 +0.0 61,631 - EX28DRAFT_2750 0.34 +1.3 61,715 - EX28DRAFT_2750 0.43 +0.4
Or see this region's nucleotide sequence