Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2744 and EX28DRAFT_2745 are separated by 1 nucleotides EX28DRAFT_2745 and EX28DRAFT_2746 overlap by 4 nucleotides
EX28DRAFT_2744: EX28DRAFT_2744 - Cytosine deaminase and related metal-dependent hydrolases, at 53,400 to 54,779
_2744
EX28DRAFT_2745: EX28DRAFT_2745 - Carbamate kinase, at 54,781 to 55,737
_2745
EX28DRAFT_2746: EX28DRAFT_2746 - hypothetical protein, at 55,734 to 57,314
_2746
Position (kb) 54
55
56 Strain fitness (log2 ratio) -1
0
1 at 53.912 kb on + strand, within EX28DRAFT_2744 at 53.913 kb on - strand, within EX28DRAFT_2744 at 53.914 kb on + strand, within EX28DRAFT_2744 at 53.914 kb on + strand, within EX28DRAFT_2744 at 53.914 kb on + strand, within EX28DRAFT_2744 at 53.914 kb on + strand, within EX28DRAFT_2744 at 53.915 kb on - strand, within EX28DRAFT_2744 at 53.915 kb on - strand, within EX28DRAFT_2744 at 53.915 kb on - strand, within EX28DRAFT_2744 at 53.977 kb on + strand, within EX28DRAFT_2744 at 53.977 kb on + strand, within EX28DRAFT_2744 at 53.978 kb on - strand, within EX28DRAFT_2744 at 54.058 kb on + strand, within EX28DRAFT_2744 at 54.161 kb on + strand, within EX28DRAFT_2744 at 54.404 kb on + strand, within EX28DRAFT_2744 at 54.405 kb on - strand, within EX28DRAFT_2744 at 54.620 kb on - strand, within EX28DRAFT_2744 at 54.782 kb on + strand at 54.783 kb on - strand at 54.783 kb on - strand at 54.783 kb on - strand at 54.802 kb on - strand at 54.970 kb on + strand, within EX28DRAFT_2745 at 54.970 kb on + strand, within EX28DRAFT_2745 at 54.970 kb on + strand, within EX28DRAFT_2745 at 54.970 kb on + strand, within EX28DRAFT_2745 at 55.093 kb on - strand, within EX28DRAFT_2745 at 55.093 kb on - strand, within EX28DRAFT_2745 at 55.363 kb on - strand, within EX28DRAFT_2745 at 55.363 kb on - strand, within EX28DRAFT_2745 at 55.381 kb on - strand, within EX28DRAFT_2745 at 55.381 kb on - strand, within EX28DRAFT_2745 at 55.556 kb on - strand, within EX28DRAFT_2745 at 55.725 kb on + strand at 55.726 kb on - strand at 55.726 kb on - strand at 55.750 kb on - strand at 55.814 kb on + strand at 55.858 kb on + strand at 56.063 kb on - strand, within EX28DRAFT_2746 at 56.354 kb on - strand, within EX28DRAFT_2746 at 56.398 kb on + strand, within EX28DRAFT_2746 at 56.398 kb on + strand, within EX28DRAFT_2746
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 53,912 + EX28DRAFT_2744 0.37 -0.4 53,913 - EX28DRAFT_2744 0.37 +0.1 53,914 + EX28DRAFT_2744 0.37 +0.6 53,914 + EX28DRAFT_2744 0.37 +0.3 53,914 + EX28DRAFT_2744 0.37 -0.7 53,914 + EX28DRAFT_2744 0.37 +0.2 53,915 - EX28DRAFT_2744 0.37 +0.3 53,915 - EX28DRAFT_2744 0.37 -0.3 53,915 - EX28DRAFT_2744 0.37 +0.5 53,977 + EX28DRAFT_2744 0.42 -0.3 53,977 + EX28DRAFT_2744 0.42 -0.3 53,978 - EX28DRAFT_2744 0.42 -0.3 54,058 + EX28DRAFT_2744 0.48 -0.0 54,161 + EX28DRAFT_2744 0.55 -0.0 54,404 + EX28DRAFT_2744 0.73 +0.4 54,405 - EX28DRAFT_2744 0.73 -0.4 54,620 - EX28DRAFT_2744 0.88 +0.1 54,782 + +0.7 54,783 - +0.5 54,783 - -0.3 54,783 - +0.8 54,802 - +0.3 54,970 + EX28DRAFT_2745 0.20 +0.6 54,970 + EX28DRAFT_2745 0.20 -1.2 54,970 + EX28DRAFT_2745 0.20 +0.5 54,970 + EX28DRAFT_2745 0.20 +0.5 55,093 - EX28DRAFT_2745 0.33 +0.1 55,093 - EX28DRAFT_2745 0.33 +0.9 55,363 - EX28DRAFT_2745 0.61 +0.3 55,363 - EX28DRAFT_2745 0.61 -0.6 55,381 - EX28DRAFT_2745 0.63 +1.0 55,381 - EX28DRAFT_2745 0.63 +1.1 55,556 - EX28DRAFT_2745 0.81 +0.0 55,725 + -0.1 55,726 - +0.4 55,726 - +1.7 55,750 - -1.5 55,814 + -0.9 55,858 + -0.5 56,063 - EX28DRAFT_2746 0.21 +1.2 56,354 - EX28DRAFT_2746 0.39 +0.7 56,398 + EX28DRAFT_2746 0.42 +0.7 56,398 + EX28DRAFT_2746 0.42 -0.1
Or see this region's nucleotide sequence