Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2657 and EX28DRAFT_2658 are separated by 107 nucleotides EX28DRAFT_2658 and EX28DRAFT_2659 are separated by 2 nucleotides
EX28DRAFT_2657: EX28DRAFT_2657 - Nucleotidyltransferase/DNA polymerase involved in DNA repair, at 2,694,993 to 2,696,051
_2657
EX28DRAFT_2658: EX28DRAFT_2658 - Uncharacterized protein conserved in bacteria, at 2,696,159 to 2,696,359
_2658
EX28DRAFT_2659: EX28DRAFT_2659 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit, at 2,696,362 to 2,697,585
_2659
Position (kb)
2696
2697 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2695.249 kb on + strand, within EX28DRAFT_2657 at 2695.567 kb on + strand, within EX28DRAFT_2657 at 2695.567 kb on + strand, within EX28DRAFT_2657 at 2695.568 kb on - strand, within EX28DRAFT_2657 at 2695.583 kb on + strand, within EX28DRAFT_2657 at 2695.584 kb on - strand, within EX28DRAFT_2657 at 2695.772 kb on + strand, within EX28DRAFT_2657 at 2695.772 kb on + strand, within EX28DRAFT_2657 at 2695.772 kb on + strand, within EX28DRAFT_2657 at 2695.773 kb on - strand, within EX28DRAFT_2657 at 2695.773 kb on - strand, within EX28DRAFT_2657 at 2695.773 kb on - strand, within EX28DRAFT_2657 at 2695.773 kb on - strand, within EX28DRAFT_2657 at 2695.815 kb on - strand, within EX28DRAFT_2657 at 2695.864 kb on - strand, within EX28DRAFT_2657 at 2696.051 kb on + strand at 2696.055 kb on - strand at 2696.077 kb on - strand at 2696.081 kb on - strand at 2696.083 kb on - strand at 2696.160 kb on + strand at 2696.161 kb on - strand at 2696.165 kb on - strand at 2696.165 kb on - strand at 2696.424 kb on + strand at 2696.460 kb on + strand at 2696.460 kb on + strand at 2696.460 kb on + strand at 2696.460 kb on + strand at 2696.461 kb on - strand at 2696.461 kb on - strand at 2696.461 kb on - strand at 2696.461 kb on - strand at 2696.462 kb on + strand at 2696.462 kb on + strand at 2696.462 kb on + strand at 2696.462 kb on + strand at 2696.462 kb on + strand at 2696.462 kb on + strand at 2696.462 kb on + strand at 2696.463 kb on - strand at 2696.463 kb on - strand at 2696.463 kb on - strand at 2696.463 kb on - strand at 2696.463 kb on - strand at 2696.463 kb on - strand at 2696.634 kb on - strand, within EX28DRAFT_2659 at 2696.634 kb on - strand, within EX28DRAFT_2659 at 2696.679 kb on + strand, within EX28DRAFT_2659 at 2696.679 kb on + strand, within EX28DRAFT_2659 at 2696.679 kb on + strand, within EX28DRAFT_2659 at 2696.846 kb on + strand, within EX28DRAFT_2659 at 2696.846 kb on + strand, within EX28DRAFT_2659 at 2696.847 kb on - strand, within EX28DRAFT_2659 at 2696.986 kb on + strand, within EX28DRAFT_2659 at 2696.987 kb on - strand, within EX28DRAFT_2659 at 2696.987 kb on - strand, within EX28DRAFT_2659 at 2697.053 kb on + strand, within EX28DRAFT_2659 at 2697.147 kb on + strand, within EX28DRAFT_2659 at 2697.150 kb on + strand, within EX28DRAFT_2659 at 2697.151 kb on - strand, within EX28DRAFT_2659 at 2697.165 kb on + strand, within EX28DRAFT_2659 at 2697.171 kb on + strand, within EX28DRAFT_2659 at 2697.341 kb on - strand, within EX28DRAFT_2659
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 2,695,249 + EX28DRAFT_2657 0.24 +0.3 2,695,567 + EX28DRAFT_2657 0.54 -0.2 2,695,567 + EX28DRAFT_2657 0.54 +1.3 2,695,568 - EX28DRAFT_2657 0.54 -0.1 2,695,583 + EX28DRAFT_2657 0.56 +0.3 2,695,584 - EX28DRAFT_2657 0.56 +0.0 2,695,772 + EX28DRAFT_2657 0.74 -0.2 2,695,772 + EX28DRAFT_2657 0.74 +0.0 2,695,772 + EX28DRAFT_2657 0.74 +0.5 2,695,773 - EX28DRAFT_2657 0.74 +1.2 2,695,773 - EX28DRAFT_2657 0.74 +0.0 2,695,773 - EX28DRAFT_2657 0.74 +0.5 2,695,773 - EX28DRAFT_2657 0.74 +0.4 2,695,815 - EX28DRAFT_2657 0.78 +0.1 2,695,864 - EX28DRAFT_2657 0.82 +0.6 2,696,051 + -0.3 2,696,055 - +0.2 2,696,077 - +0.7 2,696,081 - +0.3 2,696,083 - -0.2 2,696,160 + -0.4 2,696,161 - -0.8 2,696,165 - +0.0 2,696,165 - -0.0 2,696,424 + -1.3 2,696,460 + +0.5 2,696,460 + -0.4 2,696,460 + +0.0 2,696,460 + -0.2 2,696,461 - -0.6 2,696,461 - -3.0 2,696,461 - +0.5 2,696,461 - +0.6 2,696,462 + -0.2 2,696,462 + -0.6 2,696,462 + -0.0 2,696,462 + -0.5 2,696,462 + -0.1 2,696,462 + -0.1 2,696,462 + +0.0 2,696,463 - +0.6 2,696,463 - -0.2 2,696,463 - -1.0 2,696,463 - -0.1 2,696,463 - +0.1 2,696,463 - -0.3 2,696,634 - EX28DRAFT_2659 0.22 -0.2 2,696,634 - EX28DRAFT_2659 0.22 -0.8 2,696,679 + EX28DRAFT_2659 0.26 -1.0 2,696,679 + EX28DRAFT_2659 0.26 +0.1 2,696,679 + EX28DRAFT_2659 0.26 +0.5 2,696,846 + EX28DRAFT_2659 0.40 +0.9 2,696,846 + EX28DRAFT_2659 0.40 +1.0 2,696,847 - EX28DRAFT_2659 0.40 +0.3 2,696,986 + EX28DRAFT_2659 0.51 -0.1 2,696,987 - EX28DRAFT_2659 0.51 -0.1 2,696,987 - EX28DRAFT_2659 0.51 -0.3 2,697,053 + EX28DRAFT_2659 0.56 +0.8 2,697,147 + EX28DRAFT_2659 0.64 -0.3 2,697,150 + EX28DRAFT_2659 0.64 -0.1 2,697,151 - EX28DRAFT_2659 0.64 +0.0 2,697,165 + EX28DRAFT_2659 0.66 +1.5 2,697,171 + EX28DRAFT_2659 0.66 +1.4 2,697,341 - EX28DRAFT_2659 0.80 +0.5
Or see this region's nucleotide sequence