Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2614 and EX28DRAFT_2615 are separated by 13 nucleotides EX28DRAFT_2615 and EX28DRAFT_2616 are separated by 50 nucleotides EX28DRAFT_2616 and EX28DRAFT_2617 are separated by 99 nucleotides
EX28DRAFT_2614: EX28DRAFT_2614 - Multidrug resistance efflux pump, at 2,652,041 to 2,653,183
_2614
EX28DRAFT_2615: EX28DRAFT_2615 - drug resistance transporter, EmrB/QacA subfamily, at 2,653,197 to 2,654,741
_2615
EX28DRAFT_2616: EX28DRAFT_2616 - hypothetical protein, at 2,654,792 to 2,655,088
_2616
EX28DRAFT_2617: EX28DRAFT_2617 - Ion channel, at 2,655,188 to 2,655,883
_2617
Position (kb)
2653
2654
2655 Strain fitness (log2 ratio)
-2
-1
0
1 at 2652.212 kb on + strand, within EX28DRAFT_2614 at 2652.329 kb on - strand, within EX28DRAFT_2614 at 2652.946 kb on - strand, within EX28DRAFT_2614 at 2652.996 kb on + strand, within EX28DRAFT_2614 at 2652.997 kb on - strand, within EX28DRAFT_2614 at 2653.069 kb on + strand at 2653.069 kb on + strand at 2653.070 kb on - strand at 2653.166 kb on - strand at 2653.166 kb on - strand at 2653.202 kb on + strand at 2653.202 kb on + strand at 2653.202 kb on + strand at 2653.202 kb on + strand at 2653.203 kb on - strand at 2653.203 kb on - strand at 2653.203 kb on - strand at 2653.203 kb on - strand at 2653.203 kb on - strand at 2653.207 kb on + strand at 2653.207 kb on + strand at 2653.207 kb on + strand at 2653.208 kb on - strand at 2653.208 kb on - strand at 2653.208 kb on - strand at 2653.245 kb on - strand at 2653.250 kb on - strand at 2653.267 kb on + strand at 2653.268 kb on - strand at 2653.268 kb on - strand at 2653.387 kb on - strand, within EX28DRAFT_2615 at 2653.484 kb on + strand, within EX28DRAFT_2615 at 2653.639 kb on + strand, within EX28DRAFT_2615 at 2653.728 kb on - strand, within EX28DRAFT_2615 at 2653.815 kb on - strand, within EX28DRAFT_2615 at 2653.815 kb on - strand, within EX28DRAFT_2615 at 2653.820 kb on + strand, within EX28DRAFT_2615 at 2654.103 kb on + strand, within EX28DRAFT_2615 at 2654.105 kb on + strand, within EX28DRAFT_2615 at 2654.106 kb on - strand, within EX28DRAFT_2615 at 2654.111 kb on - strand, within EX28DRAFT_2615 at 2654.116 kb on - strand, within EX28DRAFT_2615 at 2654.117 kb on + strand, within EX28DRAFT_2615 at 2654.117 kb on + strand, within EX28DRAFT_2615 at 2654.118 kb on - strand, within EX28DRAFT_2615 at 2654.118 kb on - strand, within EX28DRAFT_2615 at 2654.190 kb on - strand, within EX28DRAFT_2615 at 2654.219 kb on - strand, within EX28DRAFT_2615 at 2654.222 kb on + strand, within EX28DRAFT_2615 at 2654.222 kb on + strand, within EX28DRAFT_2615 at 2654.308 kb on + strand, within EX28DRAFT_2615 at 2654.343 kb on + strand, within EX28DRAFT_2615 at 2654.343 kb on + strand, within EX28DRAFT_2615 at 2654.344 kb on - strand, within EX28DRAFT_2615 at 2654.346 kb on + strand, within EX28DRAFT_2615 at 2654.346 kb on + strand, within EX28DRAFT_2615 at 2654.346 kb on + strand, within EX28DRAFT_2615 at 2654.346 kb on + strand, within EX28DRAFT_2615 at 2654.347 kb on - strand, within EX28DRAFT_2615 at 2654.380 kb on + strand, within EX28DRAFT_2615 at 2654.380 kb on + strand, within EX28DRAFT_2615 at 2654.381 kb on - strand, within EX28DRAFT_2615 at 2654.489 kb on + strand, within EX28DRAFT_2615 at 2654.490 kb on - strand, within EX28DRAFT_2615 at 2654.491 kb on + strand, within EX28DRAFT_2615 at 2654.492 kb on - strand, within EX28DRAFT_2615 at 2654.492 kb on - strand, within EX28DRAFT_2615 at 2654.492 kb on - strand, within EX28DRAFT_2615 at 2654.492 kb on - strand, within EX28DRAFT_2615 at 2654.492 kb on - strand, within EX28DRAFT_2615 at 2654.492 kb on - strand, within EX28DRAFT_2615 at 2654.526 kb on - strand, within EX28DRAFT_2615 at 2654.549 kb on + strand, within EX28DRAFT_2615 at 2654.606 kb on - strand at 2654.807 kb on + strand at 2655.235 kb on + strand at 2655.595 kb on + strand, within EX28DRAFT_2617 at 2655.607 kb on + strand, within EX28DRAFT_2617 at 2655.667 kb on + strand, within EX28DRAFT_2617
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 2,652,212 + EX28DRAFT_2614 0.15 -0.8 2,652,329 - EX28DRAFT_2614 0.25 -2.0 2,652,946 - EX28DRAFT_2614 0.79 +0.7 2,652,996 + EX28DRAFT_2614 0.84 +0.9 2,652,997 - EX28DRAFT_2614 0.84 +0.4 2,653,069 + +0.1 2,653,069 + +0.2 2,653,070 - -0.4 2,653,166 - -0.5 2,653,166 - +0.6 2,653,202 + +1.1 2,653,202 + -0.2 2,653,202 + +0.1 2,653,202 + +0.2 2,653,203 - -2.0 2,653,203 - +0.6 2,653,203 - +0.2 2,653,203 - -0.1 2,653,203 - -1.2 2,653,207 + -1.0 2,653,207 + -0.0 2,653,207 + -0.2 2,653,208 - +0.1 2,653,208 - +0.1 2,653,208 - +0.0 2,653,245 - +1.2 2,653,250 - +0.7 2,653,267 + +0.7 2,653,268 - +0.1 2,653,268 - +0.5 2,653,387 - EX28DRAFT_2615 0.12 +0.1 2,653,484 + EX28DRAFT_2615 0.19 +0.5 2,653,639 + EX28DRAFT_2615 0.29 -0.3 2,653,728 - EX28DRAFT_2615 0.34 +0.3 2,653,815 - EX28DRAFT_2615 0.40 -0.7 2,653,815 - EX28DRAFT_2615 0.40 -0.0 2,653,820 + EX28DRAFT_2615 0.40 +0.1 2,654,103 + EX28DRAFT_2615 0.59 +0.4 2,654,105 + EX28DRAFT_2615 0.59 -0.2 2,654,106 - EX28DRAFT_2615 0.59 +0.0 2,654,111 - EX28DRAFT_2615 0.59 -0.1 2,654,116 - EX28DRAFT_2615 0.59 -0.4 2,654,117 + EX28DRAFT_2615 0.60 +1.3 2,654,117 + EX28DRAFT_2615 0.60 +0.0 2,654,118 - EX28DRAFT_2615 0.60 +0.9 2,654,118 - EX28DRAFT_2615 0.60 -0.7 2,654,190 - EX28DRAFT_2615 0.64 -1.0 2,654,219 - EX28DRAFT_2615 0.66 +0.3 2,654,222 + EX28DRAFT_2615 0.66 +0.1 2,654,222 + EX28DRAFT_2615 0.66 +0.1 2,654,308 + EX28DRAFT_2615 0.72 +0.8 2,654,343 + EX28DRAFT_2615 0.74 -1.5 2,654,343 + EX28DRAFT_2615 0.74 +0.2 2,654,344 - EX28DRAFT_2615 0.74 +0.7 2,654,346 + EX28DRAFT_2615 0.74 +0.3 2,654,346 + EX28DRAFT_2615 0.74 -1.8 2,654,346 + EX28DRAFT_2615 0.74 +0.4 2,654,346 + EX28DRAFT_2615 0.74 +0.3 2,654,347 - EX28DRAFT_2615 0.74 +0.9 2,654,380 + EX28DRAFT_2615 0.77 +0.3 2,654,380 + EX28DRAFT_2615 0.77 +0.5 2,654,381 - EX28DRAFT_2615 0.77 -0.3 2,654,489 + EX28DRAFT_2615 0.84 +1.0 2,654,490 - EX28DRAFT_2615 0.84 +0.2 2,654,491 + EX28DRAFT_2615 0.84 +0.2 2,654,492 - EX28DRAFT_2615 0.84 -0.1 2,654,492 - EX28DRAFT_2615 0.84 +0.3 2,654,492 - EX28DRAFT_2615 0.84 +0.2 2,654,492 - EX28DRAFT_2615 0.84 +0.9 2,654,492 - EX28DRAFT_2615 0.84 +0.0 2,654,492 - EX28DRAFT_2615 0.84 +0.2 2,654,526 - EX28DRAFT_2615 0.86 -0.3 2,654,549 + EX28DRAFT_2615 0.88 -0.2 2,654,606 - -0.3 2,654,807 + +0.3 2,655,235 + +0.5 2,655,595 + EX28DRAFT_2617 0.58 -1.2 2,655,607 + EX28DRAFT_2617 0.60 -0.0 2,655,667 + EX28DRAFT_2617 0.69 +0.4
Or see this region's nucleotide sequence