Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_2375

Experiment: M9 with sucrose; no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_2374 and EX28DRAFT_2375 are separated by 188 nucleotidesEX28DRAFT_2375 and EX28DRAFT_2376 are separated by 46 nucleotides EX28DRAFT_2374: EX28DRAFT_2374 - isochorismate synthase (EC 5.4.4.2), at 2,394,183 to 2,395,358 _2374 EX28DRAFT_2375: EX28DRAFT_2375 - ABC-type Fe2+-enterobactin transport system, periplasmic component, at 2,395,547 to 2,396,506 _2375 EX28DRAFT_2376: EX28DRAFT_2376 - Arabinose efflux permease, at 2,396,553 to 2,397,800 _2376 Position (kb) 2395 2396 2397Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2394.668 kb on + strand, within EX28DRAFT_2374at 2394.690 kb on + strand, within EX28DRAFT_2374at 2394.690 kb on + strand, within EX28DRAFT_2374at 2394.690 kb on + strand, within EX28DRAFT_2374at 2394.691 kb on - strand, within EX28DRAFT_2374at 2395.037 kb on - strand, within EX28DRAFT_2374at 2395.269 kb on - strandat 2395.289 kb on + strandat 2395.290 kb on - strandat 2395.290 kb on - strandat 2395.425 kb on - strandat 2395.461 kb on + strandat 2395.461 kb on + strandat 2395.462 kb on - strandat 2395.467 kb on - strandat 2395.585 kb on - strandat 2395.585 kb on - strandat 2395.819 kb on + strand, within EX28DRAFT_2375at 2395.851 kb on - strand, within EX28DRAFT_2375at 2396.219 kb on - strand, within EX28DRAFT_2375at 2396.281 kb on + strand, within EX28DRAFT_2375at 2396.397 kb on + strand, within EX28DRAFT_2375at 2396.456 kb on + strandat 2396.460 kb on - strandat 2396.473 kb on - strandat 2396.475 kb on + strandat 2396.475 kb on + strandat 2396.476 kb on - strandat 2396.476 kb on - strandat 2396.500 kb on + strandat 2396.501 kb on - strandat 2396.501 kb on - strandat 2396.501 kb on - strandat 2396.803 kb on + strand, within EX28DRAFT_2376at 2396.843 kb on + strand, within EX28DRAFT_2376at 2396.930 kb on + strand, within EX28DRAFT_2376at 2396.931 kb on - strand, within EX28DRAFT_2376at 2397.171 kb on + strand, within EX28DRAFT_2376at 2397.461 kb on - strand, within EX28DRAFT_2376

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control
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2,394,668 + EX28DRAFT_2374 0.41 -1.7
2,394,690 + EX28DRAFT_2374 0.43 +0.6
2,394,690 + EX28DRAFT_2374 0.43 -0.3
2,394,690 + EX28DRAFT_2374 0.43 +0.3
2,394,691 - EX28DRAFT_2374 0.43 +0.5
2,395,037 - EX28DRAFT_2374 0.73 +0.2
2,395,269 - +0.4
2,395,289 + -0.8
2,395,290 - -0.7
2,395,290 - +0.2
2,395,425 - +0.3
2,395,461 + +0.2
2,395,461 + -0.2
2,395,462 - -0.0
2,395,467 - -2.3
2,395,585 - +0.0
2,395,585 - -0.1
2,395,819 + EX28DRAFT_2375 0.28 -1.2
2,395,851 - EX28DRAFT_2375 0.32 -3.0
2,396,219 - EX28DRAFT_2375 0.70 -1.1
2,396,281 + EX28DRAFT_2375 0.76 +0.5
2,396,397 + EX28DRAFT_2375 0.89 -1.9
2,396,456 + -0.3
2,396,460 - -0.4
2,396,473 - -1.0
2,396,475 + -0.6
2,396,475 + -0.9
2,396,476 - +0.1
2,396,476 - -0.7
2,396,500 + +0.0
2,396,501 - -0.1
2,396,501 - -1.0
2,396,501 - +0.3
2,396,803 + EX28DRAFT_2376 0.20 +0.3
2,396,843 + EX28DRAFT_2376 0.23 -0.1
2,396,930 + EX28DRAFT_2376 0.30 +1.8
2,396,931 - EX28DRAFT_2376 0.30 -0.1
2,397,171 + EX28DRAFT_2376 0.50 -0.1
2,397,461 - EX28DRAFT_2376 0.73 -0.1

Or see this region's nucleotide sequence