Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2369 and EX28DRAFT_2370 are separated by 149 nucleotides EX28DRAFT_2370 and EX28DRAFT_2371 are separated by 1 nucleotides EX28DRAFT_2371 and EX28DRAFT_2372 overlap by 1 nucleotides EX28DRAFT_2372 and EX28DRAFT_2373 are separated by 10 nucleotides
EX28DRAFT_2369: EX28DRAFT_2369 - Carbon starvation protein, predicted membrane protein, at 2,388,276 to 2,390,381
_2369
EX28DRAFT_2370: EX28DRAFT_2370 - uncharacterized domain 1, at 2,390,531 to 2,390,944
_2370
EX28DRAFT_2371: EX28DRAFT_2371 - 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, at 2,390,946 to 2,391,698
_2371
EX28DRAFT_2372: EX28DRAFT_2372 - Isochorismate hydrolase, at 2,391,698 to 2,392,552
_2372
EX28DRAFT_2373: EX28DRAFT_2373 - 2,3-dihydroxybenzoate-AMP ligase, at 2,392,563 to 2,394,173
_2373
Position (kb)
2390
2391
2392 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2389.982 kb on + strand, within EX28DRAFT_2369 at 2390.144 kb on - strand, within EX28DRAFT_2369 at 2390.218 kb on + strand at 2390.218 kb on + strand at 2390.218 kb on + strand at 2390.219 kb on - strand at 2390.248 kb on + strand at 2390.314 kb on + strand at 2390.315 kb on - strand at 2390.355 kb on + strand at 2390.355 kb on + strand at 2390.355 kb on + strand at 2390.356 kb on - strand at 2390.356 kb on - strand at 2390.357 kb on + strand at 2390.357 kb on + strand at 2390.357 kb on + strand at 2390.357 kb on + strand at 2390.358 kb on - strand at 2390.358 kb on - strand at 2390.358 kb on - strand at 2390.362 kb on + strand at 2390.381 kb on + strand at 2390.381 kb on + strand at 2390.381 kb on + strand at 2390.382 kb on - strand at 2390.491 kb on + strand at 2390.491 kb on + strand at 2390.548 kb on + strand at 2390.548 kb on + strand at 2390.563 kb on + strand at 2390.862 kb on + strand, within EX28DRAFT_2370 at 2390.862 kb on + strand, within EX28DRAFT_2370 at 2390.862 kb on + strand, within EX28DRAFT_2370 at 2390.863 kb on - strand, within EX28DRAFT_2370 at 2390.863 kb on - strand, within EX28DRAFT_2370 at 2390.947 kb on + strand at 2391.108 kb on - strand, within EX28DRAFT_2371 at 2391.186 kb on - strand, within EX28DRAFT_2371 at 2391.186 kb on - strand, within EX28DRAFT_2371 at 2391.677 kb on + strand at 2391.978 kb on + strand, within EX28DRAFT_2372 at 2391.979 kb on - strand, within EX28DRAFT_2372 at 2391.979 kb on - strand, within EX28DRAFT_2372 at 2391.979 kb on - strand, within EX28DRAFT_2372 at 2392.057 kb on + strand, within EX28DRAFT_2372 at 2392.098 kb on + strand, within EX28DRAFT_2372 at 2392.100 kb on + strand, within EX28DRAFT_2372 at 2392.101 kb on - strand, within EX28DRAFT_2372 at 2392.339 kb on + strand, within EX28DRAFT_2372 at 2392.431 kb on + strand, within EX28DRAFT_2372 at 2392.493 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 2,389,982 + EX28DRAFT_2369 0.81 +1.3 2,390,144 - EX28DRAFT_2369 0.89 -0.4 2,390,218 + +0.6 2,390,218 + -1.0 2,390,218 + -0.2 2,390,219 - +0.7 2,390,248 + +0.0 2,390,314 + -1.0 2,390,315 - -0.0 2,390,355 + +0.7 2,390,355 + -0.5 2,390,355 + +1.3 2,390,356 - +0.2 2,390,356 - -0.9 2,390,357 + -1.8 2,390,357 + -0.2 2,390,357 + +0.7 2,390,357 + -0.5 2,390,358 - +0.0 2,390,358 - +0.1 2,390,358 - +0.3 2,390,362 + +0.3 2,390,381 + -0.1 2,390,381 + +0.1 2,390,381 + +0.5 2,390,382 - -0.3 2,390,491 + +0.2 2,390,491 + +0.5 2,390,548 + +0.0 2,390,548 + -0.1 2,390,563 + +0.3 2,390,862 + EX28DRAFT_2370 0.80 -0.4 2,390,862 + EX28DRAFT_2370 0.80 -2.0 2,390,862 + EX28DRAFT_2370 0.80 -0.2 2,390,863 - EX28DRAFT_2370 0.80 -0.2 2,390,863 - EX28DRAFT_2370 0.80 +0.1 2,390,947 + -0.0 2,391,108 - EX28DRAFT_2371 0.22 -1.3 2,391,186 - EX28DRAFT_2371 0.32 -0.3 2,391,186 - EX28DRAFT_2371 0.32 +0.0 2,391,677 + +0.3 2,391,978 + EX28DRAFT_2372 0.33 -0.3 2,391,979 - EX28DRAFT_2372 0.33 -0.4 2,391,979 - EX28DRAFT_2372 0.33 +0.1 2,391,979 - EX28DRAFT_2372 0.33 -0.1 2,392,057 + EX28DRAFT_2372 0.42 -1.6 2,392,098 + EX28DRAFT_2372 0.47 +0.3 2,392,100 + EX28DRAFT_2372 0.47 -0.5 2,392,101 - EX28DRAFT_2372 0.47 +1.1 2,392,339 + EX28DRAFT_2372 0.75 -0.1 2,392,431 + EX28DRAFT_2372 0.86 +0.2 2,392,493 - +2.2
Or see this region's nucleotide sequence