Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_2348

Experiment: M9 with sucrose; no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_2347 and EX28DRAFT_2348 are separated by 180 nucleotidesEX28DRAFT_2348 and EX28DRAFT_2349 are separated by 60 nucleotides EX28DRAFT_2347: EX28DRAFT_2347 - Threonine dehydrogenase and related Zn-dependent dehydrogenases, at 2,368,125 to 2,369,363 _2347 EX28DRAFT_2348: EX28DRAFT_2348 - Universal stress protein UspA and related nucleotide-binding proteins, at 2,369,544 to 2,369,972 _2348 EX28DRAFT_2349: EX28DRAFT_2349 - alkyl hydroperoxide reductase subunit F, at 2,370,033 to 2,371,598 _2349 Position (kb) 2369 2370Strain fitness (log2 ratio) -2 -1 0 1at 2368.757 kb on + strand, within EX28DRAFT_2347at 2368.758 kb on - strand, within EX28DRAFT_2347at 2368.902 kb on - strand, within EX28DRAFT_2347at 2369.351 kb on + strandat 2369.351 kb on + strandat 2369.351 kb on + strandat 2369.351 kb on + strandat 2369.351 kb on + strandat 2369.351 kb on + strandat 2369.351 kb on + strandat 2369.352 kb on - strandat 2369.352 kb on - strandat 2369.352 kb on - strandat 2369.352 kb on - strandat 2369.386 kb on + strandat 2369.392 kb on + strandat 2369.392 kb on + strandat 2369.392 kb on + strandat 2369.392 kb on + strandat 2369.392 kb on + strandat 2369.392 kb on + strandat 2369.392 kb on + strandat 2369.393 kb on - strandat 2369.393 kb on - strandat 2369.393 kb on - strandat 2369.393 kb on - strandat 2369.393 kb on - strandat 2369.395 kb on - strandat 2369.400 kb on + strandat 2369.400 kb on + strandat 2369.401 kb on - strandat 2369.404 kb on + strandat 2369.446 kb on + strandat 2369.459 kb on + strandat 2369.496 kb on - strandat 2369.525 kb on + strandat 2369.525 kb on + strandat 2369.543 kb on + strandat 2369.547 kb on + strandat 2369.547 kb on + strandat 2369.548 kb on - strandat 2369.821 kb on + strand, within EX28DRAFT_2348at 2369.966 kb on - strandat 2369.966 kb on - strandat 2370.004 kb on + strandat 2370.021 kb on + strandat 2370.031 kb on + strandat 2370.032 kb on - strandat 2370.059 kb on - strandat 2370.151 kb on - strandat 2370.206 kb on + strand, within EX28DRAFT_2349at 2370.206 kb on + strand, within EX28DRAFT_2349at 2370.236 kb on + strand, within EX28DRAFT_2349at 2370.237 kb on - strand, within EX28DRAFT_2349at 2370.237 kb on - strand, within EX28DRAFT_2349at 2370.568 kb on + strand, within EX28DRAFT_2349

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control
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2,368,757 + EX28DRAFT_2347 0.51 +0.7
2,368,758 - EX28DRAFT_2347 0.51 +0.6
2,368,902 - EX28DRAFT_2347 0.63 -0.0
2,369,351 + +0.7
2,369,351 + -0.4
2,369,351 + -1.1
2,369,351 + -1.0
2,369,351 + -0.3
2,369,351 + -0.3
2,369,351 + +0.2
2,369,352 - +0.1
2,369,352 - +0.3
2,369,352 - +1.4
2,369,352 - -0.8
2,369,386 + -0.5
2,369,392 + +0.6
2,369,392 + -0.9
2,369,392 + +0.2
2,369,392 + -0.1
2,369,392 + +0.4
2,369,392 + +0.1
2,369,392 + +0.3
2,369,393 - -0.1
2,369,393 - +0.2
2,369,393 - -0.2
2,369,393 - +0.1
2,369,393 - -2.4
2,369,395 - +0.4
2,369,400 + +0.2
2,369,400 + +0.0
2,369,401 - +0.9
2,369,404 + +0.5
2,369,446 + +0.1
2,369,459 + -0.0
2,369,496 - +0.6
2,369,525 + +0.1
2,369,525 + +0.3
2,369,543 + -0.3
2,369,547 + +0.4
2,369,547 + +0.2
2,369,548 - -0.8
2,369,821 + EX28DRAFT_2348 0.65 -0.7
2,369,966 - +0.3
2,369,966 - -0.0
2,370,004 + +0.1
2,370,021 + -1.3
2,370,031 + -0.7
2,370,032 - -0.1
2,370,059 - +0.1
2,370,151 - -1.8
2,370,206 + EX28DRAFT_2349 0.11 -1.0
2,370,206 + EX28DRAFT_2349 0.11 +0.2
2,370,236 + EX28DRAFT_2349 0.13 -0.2
2,370,237 - EX28DRAFT_2349 0.13 +0.3
2,370,237 - EX28DRAFT_2349 0.13 +0.2
2,370,568 + EX28DRAFT_2349 0.34 -0.4

Or see this region's nucleotide sequence