Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2145 and EX28DRAFT_2146 are separated by 17 nucleotides EX28DRAFT_2146 and EX28DRAFT_2147 are separated by 90 nucleotides
EX28DRAFT_2145: EX28DRAFT_2145 - Sugar phosphate permease, at 2,167,171 to 2,168,472
_2145
EX28DRAFT_2146: EX28DRAFT_2146 - Alpha-glucosidases, family 31 of glycosyl hydrolases, at 2,168,490 to 2,170,853
_2146
EX28DRAFT_2147: EX28DRAFT_2147 - ATPase components of ABC transporters with duplicated ATPase domains, at 2,170,944 to 2,172,539
_2147
Position (kb)
2168
2169
2170
2171 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2167.519 kb on - strand, within EX28DRAFT_2145 at 2167.675 kb on + strand, within EX28DRAFT_2145 at 2167.676 kb on - strand, within EX28DRAFT_2145 at 2167.714 kb on - strand, within EX28DRAFT_2145 at 2167.765 kb on + strand, within EX28DRAFT_2145 at 2167.765 kb on + strand, within EX28DRAFT_2145 at 2167.766 kb on - strand, within EX28DRAFT_2145 at 2167.766 kb on - strand, within EX28DRAFT_2145 at 2167.766 kb on - strand, within EX28DRAFT_2145 at 2167.897 kb on + strand, within EX28DRAFT_2145 at 2168.077 kb on + strand, within EX28DRAFT_2145 at 2168.185 kb on + strand, within EX28DRAFT_2145 at 2168.185 kb on + strand, within EX28DRAFT_2145 at 2168.185 kb on + strand, within EX28DRAFT_2145 at 2168.186 kb on - strand, within EX28DRAFT_2145 at 2168.186 kb on - strand, within EX28DRAFT_2145 at 2168.188 kb on - strand, within EX28DRAFT_2145 at 2168.188 kb on - strand, within EX28DRAFT_2145 at 2168.435 kb on + strand at 2168.482 kb on + strand at 2168.482 kb on + strand at 2168.482 kb on + strand at 2168.482 kb on + strand at 2168.482 kb on + strand at 2168.483 kb on - strand at 2168.577 kb on + strand at 2168.578 kb on - strand at 2168.699 kb on + strand at 2168.699 kb on + strand at 2168.699 kb on + strand at 2168.701 kb on + strand at 2168.908 kb on - strand, within EX28DRAFT_2146 at 2169.015 kb on + strand, within EX28DRAFT_2146 at 2169.051 kb on - strand, within EX28DRAFT_2146 at 2169.051 kb on - strand, within EX28DRAFT_2146 at 2169.150 kb on + strand, within EX28DRAFT_2146 at 2169.150 kb on + strand, within EX28DRAFT_2146 at 2169.151 kb on - strand, within EX28DRAFT_2146 at 2169.198 kb on + strand, within EX28DRAFT_2146 at 2169.199 kb on - strand, within EX28DRAFT_2146 at 2169.201 kb on + strand, within EX28DRAFT_2146 at 2169.202 kb on - strand, within EX28DRAFT_2146 at 2169.442 kb on + strand, within EX28DRAFT_2146 at 2169.443 kb on - strand, within EX28DRAFT_2146 at 2169.443 kb on - strand, within EX28DRAFT_2146 at 2169.447 kb on - strand, within EX28DRAFT_2146 at 2169.457 kb on - strand, within EX28DRAFT_2146 at 2169.564 kb on - strand, within EX28DRAFT_2146 at 2169.663 kb on - strand, within EX28DRAFT_2146 at 2169.897 kb on + strand, within EX28DRAFT_2146 at 2169.902 kb on + strand, within EX28DRAFT_2146 at 2169.903 kb on - strand, within EX28DRAFT_2146 at 2169.988 kb on - strand, within EX28DRAFT_2146 at 2169.989 kb on + strand, within EX28DRAFT_2146 at 2170.176 kb on + strand, within EX28DRAFT_2146 at 2170.237 kb on - strand, within EX28DRAFT_2146 at 2170.242 kb on + strand, within EX28DRAFT_2146 at 2170.243 kb on - strand, within EX28DRAFT_2146 at 2170.851 kb on + strand at 2170.851 kb on + strand at 2170.972 kb on + strand at 2170.973 kb on - strand at 2171.016 kb on - strand at 2171.090 kb on - strand at 2171.090 kb on - strand at 2171.231 kb on + strand, within EX28DRAFT_2147 at 2171.383 kb on + strand, within EX28DRAFT_2147 at 2171.708 kb on + strand, within EX28DRAFT_2147 at 2171.708 kb on + strand, within EX28DRAFT_2147 at 2171.821 kb on + strand, within EX28DRAFT_2147 at 2171.821 kb on + strand, within EX28DRAFT_2147 at 2171.821 kb on + strand, within EX28DRAFT_2147 at 2171.821 kb on + strand, within EX28DRAFT_2147 at 2171.822 kb on - strand, within EX28DRAFT_2147 at 2171.830 kb on + strand, within EX28DRAFT_2147
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 2,167,519 - EX28DRAFT_2145 0.27 -0.4 2,167,675 + EX28DRAFT_2145 0.39 -0.1 2,167,676 - EX28DRAFT_2145 0.39 +0.5 2,167,714 - EX28DRAFT_2145 0.42 +0.8 2,167,765 + EX28DRAFT_2145 0.46 -0.3 2,167,765 + EX28DRAFT_2145 0.46 -2.4 2,167,766 - EX28DRAFT_2145 0.46 -0.3 2,167,766 - EX28DRAFT_2145 0.46 +0.9 2,167,766 - EX28DRAFT_2145 0.46 +0.2 2,167,897 + EX28DRAFT_2145 0.56 +0.1 2,168,077 + EX28DRAFT_2145 0.70 -0.4 2,168,185 + EX28DRAFT_2145 0.78 -1.9 2,168,185 + EX28DRAFT_2145 0.78 -0.3 2,168,185 + EX28DRAFT_2145 0.78 +0.1 2,168,186 - EX28DRAFT_2145 0.78 -0.4 2,168,186 - EX28DRAFT_2145 0.78 -0.8 2,168,188 - EX28DRAFT_2145 0.78 -0.0 2,168,188 - EX28DRAFT_2145 0.78 -0.2 2,168,435 + -0.2 2,168,482 + +0.5 2,168,482 + +0.1 2,168,482 + -2.6 2,168,482 + +1.2 2,168,482 + +0.4 2,168,483 - -1.7 2,168,577 + -1.1 2,168,578 - -0.1 2,168,699 + +1.1 2,168,699 + +1.3 2,168,699 + +0.9 2,168,701 + -0.1 2,168,908 - EX28DRAFT_2146 0.18 +0.4 2,169,015 + EX28DRAFT_2146 0.22 +0.4 2,169,051 - EX28DRAFT_2146 0.24 +0.3 2,169,051 - EX28DRAFT_2146 0.24 +0.9 2,169,150 + EX28DRAFT_2146 0.28 -0.5 2,169,150 + EX28DRAFT_2146 0.28 +0.4 2,169,151 - EX28DRAFT_2146 0.28 +0.2 2,169,198 + EX28DRAFT_2146 0.30 +0.2 2,169,199 - EX28DRAFT_2146 0.30 -0.7 2,169,201 + EX28DRAFT_2146 0.30 -0.0 2,169,202 - EX28DRAFT_2146 0.30 -0.9 2,169,442 + EX28DRAFT_2146 0.40 +1.4 2,169,443 - EX28DRAFT_2146 0.40 +0.1 2,169,443 - EX28DRAFT_2146 0.40 +1.1 2,169,447 - EX28DRAFT_2146 0.40 +0.1 2,169,457 - EX28DRAFT_2146 0.41 +0.2 2,169,564 - EX28DRAFT_2146 0.45 -0.1 2,169,663 - EX28DRAFT_2146 0.50 -0.4 2,169,897 + EX28DRAFT_2146 0.60 +1.5 2,169,902 + EX28DRAFT_2146 0.60 -0.2 2,169,903 - EX28DRAFT_2146 0.60 +0.0 2,169,988 - EX28DRAFT_2146 0.63 +0.2 2,169,989 + EX28DRAFT_2146 0.63 +0.4 2,170,176 + EX28DRAFT_2146 0.71 +0.2 2,170,237 - EX28DRAFT_2146 0.74 -0.2 2,170,242 + EX28DRAFT_2146 0.74 -0.3 2,170,243 - EX28DRAFT_2146 0.74 +2.0 2,170,851 + +0.0 2,170,851 + -0.5 2,170,972 + -0.8 2,170,973 - -0.4 2,171,016 - -0.0 2,171,090 - +1.3 2,171,090 - +0.3 2,171,231 + EX28DRAFT_2147 0.18 +0.2 2,171,383 + EX28DRAFT_2147 0.28 -0.5 2,171,708 + EX28DRAFT_2147 0.48 -1.7 2,171,708 + EX28DRAFT_2147 0.48 +1.5 2,171,821 + EX28DRAFT_2147 0.55 +0.6 2,171,821 + EX28DRAFT_2147 0.55 -0.2 2,171,821 + EX28DRAFT_2147 0.55 +1.5 2,171,821 + EX28DRAFT_2147 0.55 -1.7 2,171,822 - EX28DRAFT_2147 0.55 +1.0 2,171,830 + EX28DRAFT_2147 0.56 -0.5
Or see this region's nucleotide sequence