Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1732 and EX28DRAFT_1733 are separated by 101 nucleotides EX28DRAFT_1733 and EX28DRAFT_1734 are separated by 127 nucleotides EX28DRAFT_1734 and EX28DRAFT_1735 are separated by 48 nucleotides EX28DRAFT_1735 and EX28DRAFT_1736 are separated by 50 nucleotides
EX28DRAFT_1732: EX28DRAFT_1732 - haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED, at 1,746,886 to 1,747,557
_1732
EX28DRAFT_1733: EX28DRAFT_1733 - Predicted membrane-bound metal-dependent hydrolases, at 1,747,659 to 1,748,249
_1733
EX28DRAFT_1734: EX28DRAFT_1734 - Predicted Na+/dicarboxylate symporter, at 1,748,377 to 1,749,768
_1734
EX28DRAFT_1735: EX28DRAFT_1735 - Cell division activator CedA, at 1,749,817 to 1,750,209
_1735
EX28DRAFT_1736: EX28DRAFT_1736 - Catalase, at 1,750,260 to 1,752,509
_1736
Position (kb)
1748
1749
1750 Strain fitness (log2 ratio)
-1
0
1 at 1747.512 kb on + strand at 1747.512 kb on + strand at 1747.612 kb on + strand at 1747.623 kb on + strand at 1747.626 kb on - strand at 1747.656 kb on - strand at 1747.702 kb on + strand at 1747.703 kb on - strand at 1747.757 kb on + strand, within EX28DRAFT_1733 at 1747.757 kb on + strand, within EX28DRAFT_1733 at 1747.758 kb on - strand, within EX28DRAFT_1733 at 1747.758 kb on - strand, within EX28DRAFT_1733 at 1747.808 kb on + strand, within EX28DRAFT_1733 at 1747.987 kb on - strand, within EX28DRAFT_1733 at 1747.991 kb on - strand, within EX28DRAFT_1733 at 1748.131 kb on - strand, within EX28DRAFT_1733 at 1748.226 kb on - strand at 1748.294 kb on - strand at 1748.359 kb on + strand at 1748.360 kb on - strand at 1748.417 kb on + strand at 1748.417 kb on + strand at 1748.417 kb on + strand at 1748.418 kb on - strand at 1748.418 kb on - strand at 1748.418 kb on - strand at 1748.424 kb on - strand at 1748.501 kb on + strand at 1748.528 kb on - strand, within EX28DRAFT_1734 at 1748.559 kb on + strand, within EX28DRAFT_1734 at 1748.559 kb on + strand, within EX28DRAFT_1734 at 1748.560 kb on - strand, within EX28DRAFT_1734 at 1748.627 kb on + strand, within EX28DRAFT_1734 at 1748.638 kb on - strand, within EX28DRAFT_1734 at 1748.836 kb on + strand, within EX28DRAFT_1734 at 1748.836 kb on + strand, within EX28DRAFT_1734 at 1748.836 kb on + strand, within EX28DRAFT_1734 at 1748.836 kb on + strand, within EX28DRAFT_1734 at 1748.836 kb on + strand, within EX28DRAFT_1734 at 1748.837 kb on - strand, within EX28DRAFT_1734 at 1748.837 kb on - strand, within EX28DRAFT_1734 at 1748.837 kb on - strand, within EX28DRAFT_1734 at 1748.837 kb on - strand, within EX28DRAFT_1734 at 1748.837 kb on - strand, within EX28DRAFT_1734 at 1749.195 kb on + strand, within EX28DRAFT_1734 at 1749.195 kb on + strand, within EX28DRAFT_1734 at 1749.196 kb on - strand, within EX28DRAFT_1734 at 1749.819 kb on - strand at 1749.933 kb on - strand, within EX28DRAFT_1735 at 1749.933 kb on - strand, within EX28DRAFT_1735 at 1750.016 kb on + strand, within EX28DRAFT_1735 at 1750.016 kb on + strand, within EX28DRAFT_1735 at 1750.016 kb on + strand, within EX28DRAFT_1735 at 1750.016 kb on + strand, within EX28DRAFT_1735 at 1750.016 kb on + strand, within EX28DRAFT_1735 at 1750.016 kb on + strand, within EX28DRAFT_1735 at 1750.016 kb on + strand, within EX28DRAFT_1735 at 1750.017 kb on - strand, within EX28DRAFT_1735 at 1750.017 kb on - strand, within EX28DRAFT_1735 at 1750.017 kb on - strand, within EX28DRAFT_1735 at 1750.017 kb on - strand, within EX28DRAFT_1735 at 1750.017 kb on - strand, within EX28DRAFT_1735 at 1750.017 kb on - strand, within EX28DRAFT_1735 at 1750.020 kb on + strand, within EX28DRAFT_1735 at 1750.020 kb on + strand, within EX28DRAFT_1735 at 1750.021 kb on - strand, within EX28DRAFT_1735 at 1750.021 kb on - strand, within EX28DRAFT_1735 at 1750.021 kb on - strand, within EX28DRAFT_1735 at 1750.021 kb on - strand, within EX28DRAFT_1735 at 1750.021 kb on - strand, within EX28DRAFT_1735 at 1750.021 kb on - strand, within EX28DRAFT_1735 at 1750.023 kb on + strand, within EX28DRAFT_1735 at 1750.102 kb on - strand, within EX28DRAFT_1735 at 1750.197 kb on + strand at 1750.197 kb on + strand at 1750.198 kb on - strand at 1750.215 kb on + strand at 1750.216 kb on - strand at 1750.222 kb on - strand at 1750.224 kb on + strand at 1750.394 kb on + strand at 1750.394 kb on + strand at 1750.668 kb on + strand, within EX28DRAFT_1736 at 1750.754 kb on - strand, within EX28DRAFT_1736
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 1,747,512 + +0.2 1,747,512 + -0.1 1,747,612 + +0.2 1,747,623 + +0.2 1,747,626 - +0.3 1,747,656 - -0.4 1,747,702 + -0.2 1,747,703 - +1.7 1,747,757 + EX28DRAFT_1733 0.17 -0.2 1,747,757 + EX28DRAFT_1733 0.17 +0.2 1,747,758 - EX28DRAFT_1733 0.17 +1.7 1,747,758 - EX28DRAFT_1733 0.17 -0.1 1,747,808 + EX28DRAFT_1733 0.25 +1.4 1,747,987 - EX28DRAFT_1733 0.55 -0.1 1,747,991 - EX28DRAFT_1733 0.56 +0.6 1,748,131 - EX28DRAFT_1733 0.80 +0.6 1,748,226 - +0.2 1,748,294 - +0.8 1,748,359 + +0.1 1,748,360 - -1.2 1,748,417 + +0.3 1,748,417 + +0.1 1,748,417 + +0.2 1,748,418 - +0.0 1,748,418 - -0.4 1,748,418 - -0.6 1,748,424 - +0.1 1,748,501 + +0.3 1,748,528 - EX28DRAFT_1734 0.11 +0.4 1,748,559 + EX28DRAFT_1734 0.13 +0.1 1,748,559 + EX28DRAFT_1734 0.13 +0.4 1,748,560 - EX28DRAFT_1734 0.13 +1.3 1,748,627 + EX28DRAFT_1734 0.18 +0.8 1,748,638 - EX28DRAFT_1734 0.19 +1.2 1,748,836 + EX28DRAFT_1734 0.33 +0.5 1,748,836 + EX28DRAFT_1734 0.33 +0.6 1,748,836 + EX28DRAFT_1734 0.33 -0.4 1,748,836 + EX28DRAFT_1734 0.33 +0.6 1,748,836 + EX28DRAFT_1734 0.33 +0.2 1,748,837 - EX28DRAFT_1734 0.33 +1.0 1,748,837 - EX28DRAFT_1734 0.33 +0.7 1,748,837 - EX28DRAFT_1734 0.33 +0.5 1,748,837 - EX28DRAFT_1734 0.33 +0.4 1,748,837 - EX28DRAFT_1734 0.33 +0.2 1,749,195 + EX28DRAFT_1734 0.59 +0.3 1,749,195 + EX28DRAFT_1734 0.59 -0.2 1,749,196 - EX28DRAFT_1734 0.59 -1.4 1,749,819 - -0.7 1,749,933 - EX28DRAFT_1735 0.30 +0.1 1,749,933 - EX28DRAFT_1735 0.30 -0.4 1,750,016 + EX28DRAFT_1735 0.51 -0.8 1,750,016 + EX28DRAFT_1735 0.51 -0.3 1,750,016 + EX28DRAFT_1735 0.51 -0.6 1,750,016 + EX28DRAFT_1735 0.51 +0.7 1,750,016 + EX28DRAFT_1735 0.51 -1.0 1,750,016 + EX28DRAFT_1735 0.51 +0.5 1,750,016 + EX28DRAFT_1735 0.51 +1.1 1,750,017 - EX28DRAFT_1735 0.51 -1.4 1,750,017 - EX28DRAFT_1735 0.51 +0.2 1,750,017 - EX28DRAFT_1735 0.51 +0.5 1,750,017 - EX28DRAFT_1735 0.51 +0.4 1,750,017 - EX28DRAFT_1735 0.51 +1.4 1,750,017 - EX28DRAFT_1735 0.51 -0.3 1,750,020 + EX28DRAFT_1735 0.52 -0.4 1,750,020 + EX28DRAFT_1735 0.52 -0.4 1,750,021 - EX28DRAFT_1735 0.52 -0.1 1,750,021 - EX28DRAFT_1735 0.52 +0.6 1,750,021 - EX28DRAFT_1735 0.52 +0.3 1,750,021 - EX28DRAFT_1735 0.52 +0.3 1,750,021 - EX28DRAFT_1735 0.52 -0.1 1,750,021 - EX28DRAFT_1735 0.52 +0.8 1,750,023 + EX28DRAFT_1735 0.52 +0.1 1,750,102 - EX28DRAFT_1735 0.73 +0.3 1,750,197 + +0.7 1,750,197 + -0.4 1,750,198 - +0.5 1,750,215 + -0.7 1,750,216 - -0.2 1,750,222 - -0.2 1,750,224 + +0.3 1,750,394 + -1.1 1,750,394 + -0.5 1,750,668 + EX28DRAFT_1736 0.18 -0.7 1,750,754 - EX28DRAFT_1736 0.22 +0.2
Or see this region's nucleotide sequence