Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1470 and EX28DRAFT_1471 are separated by 137 nucleotides EX28DRAFT_1471 and EX28DRAFT_1472 are separated by 96 nucleotides
EX28DRAFT_1470: EX28DRAFT_1470 - Signal transduction histidine kinase, at 1,483,229 to 1,484,617
_1470
EX28DRAFT_1471: EX28DRAFT_1471 - Predicted transcriptional regulator, at 1,484,755 to 1,485,234
_1471
EX28DRAFT_1472: EX28DRAFT_1472 - The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family, at 1,485,331 to 1,488,486
_1472
Position (kb)
1484
1485
1486 Strain fitness (log2 ratio)
-1
0
1 at 1483.834 kb on + strand, within EX28DRAFT_1470 at 1483.867 kb on - strand, within EX28DRAFT_1470 at 1484.312 kb on - strand, within EX28DRAFT_1470 at 1484.336 kb on + strand, within EX28DRAFT_1470 at 1484.337 kb on - strand, within EX28DRAFT_1470 at 1484.337 kb on - strand, within EX28DRAFT_1470 at 1484.547 kb on + strand at 1484.612 kb on - strand at 1484.664 kb on + strand at 1484.673 kb on + strand at 1484.673 kb on + strand at 1484.680 kb on + strand at 1484.680 kb on + strand at 1484.682 kb on + strand at 1484.699 kb on + strand at 1484.700 kb on - strand at 1484.759 kb on + strand at 1485.177 kb on + strand, within EX28DRAFT_1471 at 1485.177 kb on + strand, within EX28DRAFT_1471 at 1485.178 kb on - strand, within EX28DRAFT_1471 at 1485.178 kb on - strand, within EX28DRAFT_1471 at 1485.178 kb on - strand, within EX28DRAFT_1471 at 1485.232 kb on + strand at 1485.233 kb on - strand at 1485.381 kb on + strand at 1485.391 kb on + strand at 1485.391 kb on + strand at 1485.395 kb on + strand at 1485.526 kb on - strand at 1485.545 kb on - strand at 1485.545 kb on - strand at 1485.556 kb on + strand at 1485.636 kb on + strand at 1485.760 kb on - strand, within EX28DRAFT_1472 at 1485.927 kb on + strand, within EX28DRAFT_1472 at 1486.043 kb on + strand, within EX28DRAFT_1472 at 1486.044 kb on - strand, within EX28DRAFT_1472
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 1,483,834 + EX28DRAFT_1470 0.44 +0.1 1,483,867 - EX28DRAFT_1470 0.46 +0.3 1,484,312 - EX28DRAFT_1470 0.78 +0.1 1,484,336 + EX28DRAFT_1470 0.80 +0.1 1,484,337 - EX28DRAFT_1470 0.80 -1.2 1,484,337 - EX28DRAFT_1470 0.80 -0.3 1,484,547 + -0.5 1,484,612 - +0.5 1,484,664 + -1.7 1,484,673 + -0.3 1,484,673 + +0.2 1,484,680 + -0.6 1,484,680 + -0.1 1,484,682 + +0.8 1,484,699 + -0.1 1,484,700 - +0.2 1,484,759 + -1.1 1,485,177 + EX28DRAFT_1471 0.88 -1.1 1,485,177 + EX28DRAFT_1471 0.88 +0.3 1,485,178 - EX28DRAFT_1471 0.88 +0.8 1,485,178 - EX28DRAFT_1471 0.88 -1.7 1,485,178 - EX28DRAFT_1471 0.88 -1.4 1,485,232 + -0.0 1,485,233 - -0.2 1,485,381 + -0.3 1,485,391 + -0.0 1,485,391 + +0.1 1,485,395 + +0.0 1,485,526 - -1.0 1,485,545 - -0.8 1,485,545 - -0.4 1,485,556 + -0.0 1,485,636 + +1.4 1,485,760 - EX28DRAFT_1472 0.14 -0.1 1,485,927 + EX28DRAFT_1472 0.19 -0.4 1,486,043 + EX28DRAFT_1472 0.23 -0.4 1,486,044 - EX28DRAFT_1472 0.23 -0.3
Or see this region's nucleotide sequence