Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1466 and EX28DRAFT_1467 are separated by 253 nucleotides EX28DRAFT_1467 and EX28DRAFT_1468 are separated by 123 nucleotides EX28DRAFT_1468 and EX28DRAFT_1469 are separated by 203 nucleotides EX28DRAFT_1469 and EX28DRAFT_1470 overlap by 1 nucleotides
EX28DRAFT_1466: EX28DRAFT_1466 - Lactoylglutathione lyase and related lyases, at 1,480,161 to 1,480,586
_1466
EX28DRAFT_1467: EX28DRAFT_1467 - hypothetical protein, at 1,480,840 to 1,481,388
_1467
EX28DRAFT_1468: EX28DRAFT_1468 - Outer membrane protein V, at 1,481,512 to 1,482,348
_1468
EX28DRAFT_1469: EX28DRAFT_1469 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 1,482,552 to 1,483,229
_1469
EX28DRAFT_1470: EX28DRAFT_1470 - Signal transduction histidine kinase, at 1,483,229 to 1,484,617
_1470
Position (kb)
1481
1482
1483 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1480.566 kb on + strand at 1480.566 kb on + strand at 1480.576 kb on + strand at 1480.576 kb on + strand at 1480.576 kb on + strand at 1480.577 kb on - strand at 1480.624 kb on + strand at 1480.625 kb on - strand at 1480.625 kb on - strand at 1480.625 kb on - strand at 1480.639 kb on - strand at 1480.715 kb on - strand at 1480.766 kb on + strand at 1480.766 kb on + strand at 1480.766 kb on + strand at 1480.767 kb on - strand at 1480.767 kb on - strand at 1481.058 kb on + strand, within EX28DRAFT_1467 at 1481.068 kb on + strand, within EX28DRAFT_1467 at 1481.069 kb on - strand, within EX28DRAFT_1467 at 1481.189 kb on + strand, within EX28DRAFT_1467 at 1481.190 kb on - strand, within EX28DRAFT_1467 at 1481.190 kb on - strand, within EX28DRAFT_1467 at 1481.281 kb on + strand, within EX28DRAFT_1467 at 1481.283 kb on + strand, within EX28DRAFT_1467 at 1481.283 kb on + strand, within EX28DRAFT_1467 at 1481.285 kb on + strand, within EX28DRAFT_1467 at 1481.285 kb on + strand, within EX28DRAFT_1467 at 1481.286 kb on - strand, within EX28DRAFT_1467 at 1481.286 kb on - strand, within EX28DRAFT_1467 at 1481.287 kb on + strand, within EX28DRAFT_1467 at 1481.288 kb on - strand, within EX28DRAFT_1467 at 1481.387 kb on - strand at 1481.463 kb on + strand at 1481.464 kb on - strand at 1481.523 kb on - strand at 1481.675 kb on + strand, within EX28DRAFT_1468 at 1481.675 kb on + strand, within EX28DRAFT_1468 at 1481.675 kb on + strand, within EX28DRAFT_1468 at 1481.675 kb on + strand, within EX28DRAFT_1468 at 1481.744 kb on + strand, within EX28DRAFT_1468 at 1481.745 kb on - strand, within EX28DRAFT_1468 at 1481.754 kb on + strand, within EX28DRAFT_1468 at 1481.754 kb on + strand, within EX28DRAFT_1468 at 1481.754 kb on + strand, within EX28DRAFT_1468 at 1481.755 kb on - strand, within EX28DRAFT_1468 at 1481.755 kb on - strand, within EX28DRAFT_1468 at 1481.756 kb on + strand, within EX28DRAFT_1468 at 1481.756 kb on + strand, within EX28DRAFT_1468 at 1481.756 kb on + strand, within EX28DRAFT_1468 at 1481.756 kb on + strand, within EX28DRAFT_1468 at 1481.756 kb on + strand, within EX28DRAFT_1468 at 1481.756 kb on + strand, within EX28DRAFT_1468 at 1481.756 kb on + strand, within EX28DRAFT_1468 at 1481.757 kb on - strand, within EX28DRAFT_1468 at 1481.757 kb on - strand, within EX28DRAFT_1468 at 1481.814 kb on + strand, within EX28DRAFT_1468 at 1481.816 kb on + strand, within EX28DRAFT_1468 at 1481.953 kb on + strand, within EX28DRAFT_1468 at 1482.007 kb on + strand, within EX28DRAFT_1468 at 1482.007 kb on + strand, within EX28DRAFT_1468 at 1482.007 kb on + strand, within EX28DRAFT_1468 at 1482.016 kb on - strand, within EX28DRAFT_1468 at 1482.053 kb on + strand, within EX28DRAFT_1468 at 1482.053 kb on + strand, within EX28DRAFT_1468 at 1482.128 kb on + strand, within EX28DRAFT_1468 at 1482.324 kb on + strand at 1482.435 kb on + strand at 1482.436 kb on - strand at 1482.514 kb on + strand at 1482.515 kb on - strand at 1482.540 kb on - strand at 1482.540 kb on - strand at 1482.540 kb on - strand at 1482.546 kb on - strand at 1482.546 kb on - strand at 1482.565 kb on + strand at 1482.566 kb on - strand at 1482.635 kb on - strand, within EX28DRAFT_1469 at 1482.843 kb on + strand, within EX28DRAFT_1469 at 1482.861 kb on - strand, within EX28DRAFT_1469 at 1482.861 kb on - strand, within EX28DRAFT_1469 at 1482.910 kb on - strand, within EX28DRAFT_1469 at 1482.994 kb on + strand, within EX28DRAFT_1469 at 1482.995 kb on - strand, within EX28DRAFT_1469 at 1483.059 kb on - strand, within EX28DRAFT_1469 at 1483.279 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 1,480,566 + +0.5 1,480,566 + +1.3 1,480,576 + -0.1 1,480,576 + -0.9 1,480,576 + +0.4 1,480,577 - -0.3 1,480,624 + +1.2 1,480,625 - -0.7 1,480,625 - -0.5 1,480,625 - +0.4 1,480,639 - -0.4 1,480,715 - -0.8 1,480,766 + +0.4 1,480,766 + -0.0 1,480,766 + -0.3 1,480,767 - +0.1 1,480,767 - -0.5 1,481,058 + EX28DRAFT_1467 0.40 -0.9 1,481,068 + EX28DRAFT_1467 0.42 +0.3 1,481,069 - EX28DRAFT_1467 0.42 +0.2 1,481,189 + EX28DRAFT_1467 0.64 +0.1 1,481,190 - EX28DRAFT_1467 0.64 -0.5 1,481,190 - EX28DRAFT_1467 0.64 +0.3 1,481,281 + EX28DRAFT_1467 0.80 +0.5 1,481,283 + EX28DRAFT_1467 0.81 +0.4 1,481,283 + EX28DRAFT_1467 0.81 -3.1 1,481,285 + EX28DRAFT_1467 0.81 -0.4 1,481,285 + EX28DRAFT_1467 0.81 -0.8 1,481,286 - EX28DRAFT_1467 0.81 +1.1 1,481,286 - EX28DRAFT_1467 0.81 -0.2 1,481,287 + EX28DRAFT_1467 0.81 +0.1 1,481,288 - EX28DRAFT_1467 0.82 -2.4 1,481,387 - -0.6 1,481,463 + +0.1 1,481,464 - -0.2 1,481,523 - +0.5 1,481,675 + EX28DRAFT_1468 0.19 -0.8 1,481,675 + EX28DRAFT_1468 0.19 -2.5 1,481,675 + EX28DRAFT_1468 0.19 -0.1 1,481,675 + EX28DRAFT_1468 0.19 -0.9 1,481,744 + EX28DRAFT_1468 0.28 +0.2 1,481,745 - EX28DRAFT_1468 0.28 -0.3 1,481,754 + EX28DRAFT_1468 0.29 -0.3 1,481,754 + EX28DRAFT_1468 0.29 +0.6 1,481,754 + EX28DRAFT_1468 0.29 +0.2 1,481,755 - EX28DRAFT_1468 0.29 +0.1 1,481,755 - EX28DRAFT_1468 0.29 -1.2 1,481,756 + EX28DRAFT_1468 0.29 +0.5 1,481,756 + EX28DRAFT_1468 0.29 +0.5 1,481,756 + EX28DRAFT_1468 0.29 -0.3 1,481,756 + EX28DRAFT_1468 0.29 -0.1 1,481,756 + EX28DRAFT_1468 0.29 -0.5 1,481,756 + EX28DRAFT_1468 0.29 -1.5 1,481,756 + EX28DRAFT_1468 0.29 -0.1 1,481,757 - EX28DRAFT_1468 0.29 -0.4 1,481,757 - EX28DRAFT_1468 0.29 -0.5 1,481,814 + EX28DRAFT_1468 0.36 +0.0 1,481,816 + EX28DRAFT_1468 0.36 -0.6 1,481,953 + EX28DRAFT_1468 0.53 +0.3 1,482,007 + EX28DRAFT_1468 0.59 -1.1 1,482,007 + EX28DRAFT_1468 0.59 -1.9 1,482,007 + EX28DRAFT_1468 0.59 +0.0 1,482,016 - EX28DRAFT_1468 0.60 +0.4 1,482,053 + EX28DRAFT_1468 0.65 +0.2 1,482,053 + EX28DRAFT_1468 0.65 +0.1 1,482,128 + EX28DRAFT_1468 0.74 -0.8 1,482,324 + +0.5 1,482,435 + -1.4 1,482,436 - -0.1 1,482,514 + +0.3 1,482,515 - -0.1 1,482,540 - +0.7 1,482,540 - -1.0 1,482,540 - +0.5 1,482,546 - +0.1 1,482,546 - +0.2 1,482,565 + +0.3 1,482,566 - -0.8 1,482,635 - EX28DRAFT_1469 0.12 -0.6 1,482,843 + EX28DRAFT_1469 0.43 +1.1 1,482,861 - EX28DRAFT_1469 0.46 +0.7 1,482,861 - EX28DRAFT_1469 0.46 -0.6 1,482,910 - EX28DRAFT_1469 0.53 -1.3 1,482,994 + EX28DRAFT_1469 0.65 -0.2 1,482,995 - EX28DRAFT_1469 0.65 +0.0 1,483,059 - EX28DRAFT_1469 0.75 +0.2 1,483,279 + -1.1
Or see this region's nucleotide sequence