Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1426 and EX28DRAFT_1427 overlap by 4 nucleotides EX28DRAFT_1427 and EX28DRAFT_1428 are separated by 51 nucleotides EX28DRAFT_1428 and EX28DRAFT_1429 are separated by 241 nucleotides
EX28DRAFT_1426: EX28DRAFT_1426 - Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily), at 1,437,509 to 1,438,273
_1426
EX28DRAFT_1427: EX28DRAFT_1427 - Acyl carrier protein phosphodiesterase, at 1,438,270 to 1,438,884
_1427
EX28DRAFT_1428: EX28DRAFT_1428 - NAD-dependent aldehyde dehydrogenases, at 1,438,936 to 1,440,435
_1428
EX28DRAFT_1429: EX28DRAFT_1429 - AraC-type DNA-binding domain-containing proteins, at 1,440,677 to 1,441,585
_1429
Position (kb)
1438
1439
1440
1441 Strain fitness (log2 ratio)
-2
-1
0
1 at 1437.959 kb on + strand, within EX28DRAFT_1426 at 1437.992 kb on - strand, within EX28DRAFT_1426 at 1438.092 kb on - strand, within EX28DRAFT_1426 at 1438.175 kb on - strand, within EX28DRAFT_1426 at 1438.177 kb on + strand, within EX28DRAFT_1426 at 1438.178 kb on - strand, within EX28DRAFT_1426 at 1438.189 kb on + strand, within EX28DRAFT_1426 at 1438.189 kb on + strand, within EX28DRAFT_1426 at 1438.190 kb on - strand, within EX28DRAFT_1426 at 1438.190 kb on - strand, within EX28DRAFT_1426 at 1438.286 kb on + strand at 1438.287 kb on - strand at 1438.287 kb on - strand at 1438.287 kb on - strand at 1438.545 kb on + strand, within EX28DRAFT_1427 at 1438.545 kb on + strand, within EX28DRAFT_1427 at 1438.546 kb on - strand, within EX28DRAFT_1427 at 1438.546 kb on - strand, within EX28DRAFT_1427 at 1438.549 kb on + strand, within EX28DRAFT_1427 at 1438.550 kb on - strand, within EX28DRAFT_1427 at 1438.550 kb on - strand, within EX28DRAFT_1427 at 1438.552 kb on - strand, within EX28DRAFT_1427 at 1438.587 kb on - strand, within EX28DRAFT_1427 at 1438.621 kb on + strand, within EX28DRAFT_1427 at 1438.622 kb on - strand, within EX28DRAFT_1427 at 1438.665 kb on + strand, within EX28DRAFT_1427 at 1438.693 kb on + strand, within EX28DRAFT_1427 at 1438.694 kb on - strand, within EX28DRAFT_1427 at 1439.098 kb on - strand, within EX28DRAFT_1428 at 1439.099 kb on + strand, within EX28DRAFT_1428 at 1439.286 kb on - strand, within EX28DRAFT_1428 at 1439.288 kb on + strand, within EX28DRAFT_1428 at 1439.288 kb on + strand, within EX28DRAFT_1428 at 1439.288 kb on + strand, within EX28DRAFT_1428 at 1439.497 kb on - strand, within EX28DRAFT_1428 at 1439.498 kb on + strand, within EX28DRAFT_1428 at 1439.498 kb on + strand, within EX28DRAFT_1428 at 1439.498 kb on + strand, within EX28DRAFT_1428 at 1439.498 kb on + strand, within EX28DRAFT_1428 at 1439.498 kb on + strand, within EX28DRAFT_1428 at 1439.499 kb on - strand, within EX28DRAFT_1428 at 1439.499 kb on - strand, within EX28DRAFT_1428 at 1439.499 kb on - strand, within EX28DRAFT_1428 at 1439.499 kb on - strand, within EX28DRAFT_1428 at 1439.856 kb on + strand, within EX28DRAFT_1428 at 1439.857 kb on - strand, within EX28DRAFT_1428 at 1439.857 kb on - strand, within EX28DRAFT_1428 at 1440.048 kb on - strand, within EX28DRAFT_1428 at 1440.436 kb on - strand at 1440.441 kb on - strand at 1440.478 kb on + strand at 1440.479 kb on - strand at 1440.566 kb on + strand at 1440.569 kb on - strand at 1440.569 kb on - strand at 1440.598 kb on - strand at 1440.598 kb on - strand at 1440.599 kb on + strand at 1440.600 kb on - strand at 1440.612 kb on - strand at 1440.612 kb on - strand at 1440.612 kb on - strand at 1440.612 kb on - strand at 1440.704 kb on + strand at 1440.727 kb on + strand at 1440.798 kb on - strand, within EX28DRAFT_1429 at 1440.877 kb on + strand, within EX28DRAFT_1429 at 1440.893 kb on + strand, within EX28DRAFT_1429 at 1440.893 kb on + strand, within EX28DRAFT_1429 at 1440.894 kb on - strand, within EX28DRAFT_1429 at 1440.967 kb on + strand, within EX28DRAFT_1429 at 1441.083 kb on + strand, within EX28DRAFT_1429 at 1441.084 kb on - strand, within EX28DRAFT_1429 at 1441.084 kb on - strand, within EX28DRAFT_1429 at 1441.351 kb on + strand, within EX28DRAFT_1429 at 1441.409 kb on + strand, within EX28DRAFT_1429
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 1,437,959 + EX28DRAFT_1426 0.59 +1.5 1,437,992 - EX28DRAFT_1426 0.63 +1.6 1,438,092 - EX28DRAFT_1426 0.76 +0.5 1,438,175 - EX28DRAFT_1426 0.87 +0.3 1,438,177 + EX28DRAFT_1426 0.87 +0.1 1,438,178 - EX28DRAFT_1426 0.87 +0.2 1,438,189 + EX28DRAFT_1426 0.89 -0.5 1,438,189 + EX28DRAFT_1426 0.89 +0.5 1,438,190 - EX28DRAFT_1426 0.89 +0.1 1,438,190 - EX28DRAFT_1426 0.89 -1.2 1,438,286 + -1.2 1,438,287 - +0.3 1,438,287 - +0.1 1,438,287 - -1.2 1,438,545 + EX28DRAFT_1427 0.45 -0.3 1,438,545 + EX28DRAFT_1427 0.45 -0.2 1,438,546 - EX28DRAFT_1427 0.45 -0.1 1,438,546 - EX28DRAFT_1427 0.45 +0.6 1,438,549 + EX28DRAFT_1427 0.45 +1.0 1,438,550 - EX28DRAFT_1427 0.46 +0.7 1,438,550 - EX28DRAFT_1427 0.46 +0.7 1,438,552 - EX28DRAFT_1427 0.46 -0.0 1,438,587 - EX28DRAFT_1427 0.52 -2.3 1,438,621 + EX28DRAFT_1427 0.57 +0.1 1,438,622 - EX28DRAFT_1427 0.57 -0.5 1,438,665 + EX28DRAFT_1427 0.64 +0.9 1,438,693 + EX28DRAFT_1427 0.69 +0.8 1,438,694 - EX28DRAFT_1427 0.69 +1.2 1,439,098 - EX28DRAFT_1428 0.11 +0.7 1,439,099 + EX28DRAFT_1428 0.11 -0.3 1,439,286 - EX28DRAFT_1428 0.23 -0.4 1,439,288 + EX28DRAFT_1428 0.23 +0.5 1,439,288 + EX28DRAFT_1428 0.23 +0.3 1,439,288 + EX28DRAFT_1428 0.23 +0.3 1,439,497 - EX28DRAFT_1428 0.37 +0.1 1,439,498 + EX28DRAFT_1428 0.37 -1.0 1,439,498 + EX28DRAFT_1428 0.37 -1.5 1,439,498 + EX28DRAFT_1428 0.37 +0.5 1,439,498 + EX28DRAFT_1428 0.37 -0.9 1,439,498 + EX28DRAFT_1428 0.37 +1.2 1,439,499 - EX28DRAFT_1428 0.38 +0.4 1,439,499 - EX28DRAFT_1428 0.38 +0.6 1,439,499 - EX28DRAFT_1428 0.38 +0.3 1,439,499 - EX28DRAFT_1428 0.38 +1.2 1,439,856 + EX28DRAFT_1428 0.61 +0.1 1,439,857 - EX28DRAFT_1428 0.61 -0.2 1,439,857 - EX28DRAFT_1428 0.61 -0.4 1,440,048 - EX28DRAFT_1428 0.74 -0.4 1,440,436 - -0.5 1,440,441 - -0.5 1,440,478 + -0.5 1,440,479 - +0.2 1,440,566 + -0.3 1,440,569 - +0.5 1,440,569 - +0.4 1,440,598 - +0.6 1,440,598 - +0.5 1,440,599 + +0.1 1,440,600 - +0.5 1,440,612 - -1.3 1,440,612 - +0.8 1,440,612 - -2.0 1,440,612 - +0.4 1,440,704 + -0.1 1,440,727 + -0.3 1,440,798 - EX28DRAFT_1429 0.13 +0.6 1,440,877 + EX28DRAFT_1429 0.22 +0.8 1,440,893 + EX28DRAFT_1429 0.24 -0.1 1,440,893 + EX28DRAFT_1429 0.24 +0.0 1,440,894 - EX28DRAFT_1429 0.24 -0.1 1,440,967 + EX28DRAFT_1429 0.32 -0.5 1,441,083 + EX28DRAFT_1429 0.45 +0.2 1,441,084 - EX28DRAFT_1429 0.45 +0.5 1,441,084 - EX28DRAFT_1429 0.45 -0.6 1,441,351 + EX28DRAFT_1429 0.74 -0.1 1,441,409 + EX28DRAFT_1429 0.81 -0.4
Or see this region's nucleotide sequence