Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_1269

Experiment: M9 with sucrose; no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_1268 and EX28DRAFT_1269 overlap by 4 nucleotidesEX28DRAFT_1269 and EX28DRAFT_1270 are separated by 57 nucleotides EX28DRAFT_1268: EX28DRAFT_1268 - Lysophospholipase L1 and related esterases, at 1,284,621 to 1,285,736 _1268 EX28DRAFT_1269: EX28DRAFT_1269 - Head domain of trimeric autotransporter adhesin, at 1,285,733 to 1,287,241 _1269 EX28DRAFT_1270: EX28DRAFT_1270 - Putative phage tail protein, at 1,287,299 to 1,289,782 _1270 Position (kb) 1285 1286 1287 1288Strain fitness (log2 ratio) -2 -1 0 1 2at 1284.802 kb on - strand, within EX28DRAFT_1268at 1285.313 kb on + strand, within EX28DRAFT_1268at 1285.454 kb on + strand, within EX28DRAFT_1268at 1285.472 kb on - strand, within EX28DRAFT_1268at 1285.596 kb on - strand, within EX28DRAFT_1268at 1285.753 kb on + strandat 1285.810 kb on + strandat 1285.820 kb on - strandat 1285.826 kb on + strandat 1285.838 kb on - strandat 1285.874 kb on - strandat 1285.892 kb on + strand, within EX28DRAFT_1269at 1285.893 kb on - strand, within EX28DRAFT_1269at 1285.913 kb on - strand, within EX28DRAFT_1269at 1285.955 kb on - strand, within EX28DRAFT_1269at 1285.957 kb on + strand, within EX28DRAFT_1269at 1285.957 kb on + strand, within EX28DRAFT_1269at 1285.957 kb on + strand, within EX28DRAFT_1269at 1285.957 kb on + strand, within EX28DRAFT_1269at 1285.957 kb on + strand, within EX28DRAFT_1269at 1285.958 kb on - strand, within EX28DRAFT_1269at 1285.963 kb on + strand, within EX28DRAFT_1269at 1285.963 kb on + strand, within EX28DRAFT_1269at 1285.971 kb on - strand, within EX28DRAFT_1269at 1286.069 kb on + strand, within EX28DRAFT_1269at 1286.069 kb on + strand, within EX28DRAFT_1269at 1286.087 kb on - strand, within EX28DRAFT_1269at 1286.195 kb on - strand, within EX28DRAFT_1269at 1286.226 kb on + strand, within EX28DRAFT_1269at 1286.288 kb on + strand, within EX28DRAFT_1269at 1286.305 kb on + strand, within EX28DRAFT_1269at 1286.438 kb on + strand, within EX28DRAFT_1269at 1286.438 kb on + strand, within EX28DRAFT_1269at 1286.438 kb on + strand, within EX28DRAFT_1269at 1286.438 kb on + strand, within EX28DRAFT_1269at 1286.439 kb on - strand, within EX28DRAFT_1269at 1286.439 kb on - strand, within EX28DRAFT_1269at 1286.441 kb on - strand, within EX28DRAFT_1269at 1286.441 kb on - strand, within EX28DRAFT_1269at 1286.441 kb on - strand, within EX28DRAFT_1269at 1286.491 kb on + strand, within EX28DRAFT_1269at 1286.492 kb on - strand, within EX28DRAFT_1269at 1286.550 kb on + strand, within EX28DRAFT_1269at 1286.550 kb on + strand, within EX28DRAFT_1269at 1286.550 kb on + strand, within EX28DRAFT_1269at 1286.550 kb on + strand, within EX28DRAFT_1269at 1286.550 kb on + strand, within EX28DRAFT_1269at 1286.551 kb on - strand, within EX28DRAFT_1269at 1286.551 kb on - strand, within EX28DRAFT_1269at 1286.551 kb on - strand, within EX28DRAFT_1269at 1286.551 kb on - strand, within EX28DRAFT_1269at 1286.556 kb on - strand, within EX28DRAFT_1269at 1286.583 kb on + strand, within EX28DRAFT_1269at 1286.584 kb on - strand, within EX28DRAFT_1269at 1286.625 kb on + strand, within EX28DRAFT_1269at 1286.626 kb on - strand, within EX28DRAFT_1269at 1286.626 kb on - strand, within EX28DRAFT_1269at 1286.746 kb on + strand, within EX28DRAFT_1269at 1286.761 kb on + strand, within EX28DRAFT_1269at 1286.762 kb on - strand, within EX28DRAFT_1269at 1286.799 kb on + strand, within EX28DRAFT_1269at 1286.800 kb on - strand, within EX28DRAFT_1269at 1286.800 kb on - strand, within EX28DRAFT_1269at 1286.800 kb on - strand, within EX28DRAFT_1269at 1286.800 kb on - strand, within EX28DRAFT_1269at 1286.800 kb on - strand, within EX28DRAFT_1269at 1286.873 kb on + strand, within EX28DRAFT_1269at 1286.874 kb on - strand, within EX28DRAFT_1269at 1286.977 kb on + strand, within EX28DRAFT_1269at 1286.977 kb on + strand, within EX28DRAFT_1269at 1286.978 kb on - strand, within EX28DRAFT_1269at 1286.980 kb on + strand, within EX28DRAFT_1269at 1287.066 kb on + strand, within EX28DRAFT_1269at 1287.067 kb on - strand, within EX28DRAFT_1269at 1287.109 kb on - strandat 1287.135 kb on + strandat 1287.135 kb on + strandat 1287.212 kb on + strandat 1287.300 kb on + strandat 1287.321 kb on + strandat 1287.420 kb on + strandat 1287.632 kb on - strand, within EX28DRAFT_1270at 1287.657 kb on + strand, within EX28DRAFT_1270at 1287.658 kb on - strand, within EX28DRAFT_1270at 1287.662 kb on - strand, within EX28DRAFT_1270at 1287.662 kb on - strand, within EX28DRAFT_1270at 1287.741 kb on + strand, within EX28DRAFT_1270at 1287.742 kb on - strand, within EX28DRAFT_1270at 1287.742 kb on - strand, within EX28DRAFT_1270at 1287.802 kb on - strand, within EX28DRAFT_1270at 1287.886 kb on + strand, within EX28DRAFT_1270at 1287.886 kb on + strand, within EX28DRAFT_1270at 1287.887 kb on - strand, within EX28DRAFT_1270at 1287.991 kb on + strand, within EX28DRAFT_1270at 1287.995 kb on + strand, within EX28DRAFT_1270at 1288.178 kb on + strand, within EX28DRAFT_1270at 1288.195 kb on - strand, within EX28DRAFT_1270at 1288.198 kb on + strand, within EX28DRAFT_1270at 1288.226 kb on + strand, within EX28DRAFT_1270

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control
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1,284,802 - EX28DRAFT_1268 0.16 +0.3
1,285,313 + EX28DRAFT_1268 0.62 -0.6
1,285,454 + EX28DRAFT_1268 0.75 +0.6
1,285,472 - EX28DRAFT_1268 0.76 -1.2
1,285,596 - EX28DRAFT_1268 0.87 -0.6
1,285,753 + +0.8
1,285,810 + -0.3
1,285,820 - -0.4
1,285,826 + +0.1
1,285,838 - -0.0
1,285,874 - +0.9
1,285,892 + EX28DRAFT_1269 0.11 -0.7
1,285,893 - EX28DRAFT_1269 0.11 -0.5
1,285,913 - EX28DRAFT_1269 0.12 +1.0
1,285,955 - EX28DRAFT_1269 0.15 +1.6
1,285,957 + EX28DRAFT_1269 0.15 -0.4
1,285,957 + EX28DRAFT_1269 0.15 -2.2
1,285,957 + EX28DRAFT_1269 0.15 +1.0
1,285,957 + EX28DRAFT_1269 0.15 +0.4
1,285,957 + EX28DRAFT_1269 0.15 -0.4
1,285,958 - EX28DRAFT_1269 0.15 -0.2
1,285,963 + EX28DRAFT_1269 0.15 +0.0
1,285,963 + EX28DRAFT_1269 0.15 -0.4
1,285,971 - EX28DRAFT_1269 0.16 +0.1
1,286,069 + EX28DRAFT_1269 0.22 -0.3
1,286,069 + EX28DRAFT_1269 0.22 -0.1
1,286,087 - EX28DRAFT_1269 0.23 +0.8
1,286,195 - EX28DRAFT_1269 0.31 -0.3
1,286,226 + EX28DRAFT_1269 0.33 +1.7
1,286,288 + EX28DRAFT_1269 0.37 +2.1
1,286,305 + EX28DRAFT_1269 0.38 +0.4
1,286,438 + EX28DRAFT_1269 0.47 +0.2
1,286,438 + EX28DRAFT_1269 0.47 -0.1
1,286,438 + EX28DRAFT_1269 0.47 -0.4
1,286,438 + EX28DRAFT_1269 0.47 -0.2
1,286,439 - EX28DRAFT_1269 0.47 -1.2
1,286,439 - EX28DRAFT_1269 0.47 +0.4
1,286,441 - EX28DRAFT_1269 0.47 -0.1
1,286,441 - EX28DRAFT_1269 0.47 +0.4
1,286,441 - EX28DRAFT_1269 0.47 +0.1
1,286,491 + EX28DRAFT_1269 0.50 -2.2
1,286,492 - EX28DRAFT_1269 0.50 +0.0
1,286,550 + EX28DRAFT_1269 0.54 -2.4
1,286,550 + EX28DRAFT_1269 0.54 -2.0
1,286,550 + EX28DRAFT_1269 0.54 -0.8
1,286,550 + EX28DRAFT_1269 0.54 -1.9
1,286,550 + EX28DRAFT_1269 0.54 +1.4
1,286,551 - EX28DRAFT_1269 0.54 -0.2
1,286,551 - EX28DRAFT_1269 0.54 -0.6
1,286,551 - EX28DRAFT_1269 0.54 -0.7
1,286,551 - EX28DRAFT_1269 0.54 +1.1
1,286,556 - EX28DRAFT_1269 0.55 -0.0
1,286,583 + EX28DRAFT_1269 0.56 +0.1
1,286,584 - EX28DRAFT_1269 0.56 -0.6
1,286,625 + EX28DRAFT_1269 0.59 +0.2
1,286,626 - EX28DRAFT_1269 0.59 +1.0
1,286,626 - EX28DRAFT_1269 0.59 +0.0
1,286,746 + EX28DRAFT_1269 0.67 -0.3
1,286,761 + EX28DRAFT_1269 0.68 -0.1
1,286,762 - EX28DRAFT_1269 0.68 +0.6
1,286,799 + EX28DRAFT_1269 0.71 -0.2
1,286,800 - EX28DRAFT_1269 0.71 +0.6
1,286,800 - EX28DRAFT_1269 0.71 +0.5
1,286,800 - EX28DRAFT_1269 0.71 +0.6
1,286,800 - EX28DRAFT_1269 0.71 -1.4
1,286,800 - EX28DRAFT_1269 0.71 -1.8
1,286,873 + EX28DRAFT_1269 0.76 +0.2
1,286,874 - EX28DRAFT_1269 0.76 -0.4
1,286,977 + EX28DRAFT_1269 0.82 -1.0
1,286,977 + EX28DRAFT_1269 0.82 -0.2
1,286,978 - EX28DRAFT_1269 0.83 +1.7
1,286,980 + EX28DRAFT_1269 0.83 -0.4
1,287,066 + EX28DRAFT_1269 0.88 -1.0
1,287,067 - EX28DRAFT_1269 0.88 +1.1
1,287,109 - -0.3
1,287,135 + -1.6
1,287,135 + +0.1
1,287,212 + +0.9
1,287,300 + -2.2
1,287,321 + +0.3
1,287,420 + -1.2
1,287,632 - EX28DRAFT_1270 0.13 +0.3
1,287,657 + EX28DRAFT_1270 0.14 -0.7
1,287,658 - EX28DRAFT_1270 0.14 +0.6
1,287,662 - EX28DRAFT_1270 0.15 +1.4
1,287,662 - EX28DRAFT_1270 0.15 +0.1
1,287,741 + EX28DRAFT_1270 0.18 -0.2
1,287,742 - EX28DRAFT_1270 0.18 +0.1
1,287,742 - EX28DRAFT_1270 0.18 +0.4
1,287,802 - EX28DRAFT_1270 0.20 -0.2
1,287,886 + EX28DRAFT_1270 0.24 +0.4
1,287,886 + EX28DRAFT_1270 0.24 +1.3
1,287,887 - EX28DRAFT_1270 0.24 +0.5
1,287,991 + EX28DRAFT_1270 0.28 -0.1
1,287,995 + EX28DRAFT_1270 0.28 +0.0
1,288,178 + EX28DRAFT_1270 0.35 -0.1
1,288,195 - EX28DRAFT_1270 0.36 +1.0
1,288,198 + EX28DRAFT_1270 0.36 -0.3
1,288,226 + EX28DRAFT_1270 0.37 +1.5

Or see this region's nucleotide sequence