Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1060 and EX28DRAFT_1061 are separated by 45 nucleotides EX28DRAFT_1061 and EX28DRAFT_1062 are separated by 32 nucleotides
EX28DRAFT_1060: EX28DRAFT_1060 - lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase, at 1,070,292 to 1,071,293
_1060
EX28DRAFT_1061: EX28DRAFT_1061 - Malic enzyme, at 1,071,339 to 1,073,024
_1061
EX28DRAFT_1062: EX28DRAFT_1062 - Predicted permeases, at 1,073,057 to 1,074,004
_1062
Position (kb)
1071
1072
1073
1074 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1070.967 kb on + strand, within EX28DRAFT_1060 at 1070.967 kb on + strand, within EX28DRAFT_1060 at 1070.968 kb on - strand, within EX28DRAFT_1060 at 1070.968 kb on - strand, within EX28DRAFT_1060 at 1070.968 kb on - strand, within EX28DRAFT_1060 at 1071.050 kb on + strand, within EX28DRAFT_1060 at 1071.156 kb on + strand, within EX28DRAFT_1060 at 1071.156 kb on + strand, within EX28DRAFT_1060 at 1071.156 kb on + strand, within EX28DRAFT_1060 at 1071.156 kb on + strand, within EX28DRAFT_1060 at 1071.157 kb on - strand, within EX28DRAFT_1060 at 1071.157 kb on - strand, within EX28DRAFT_1060 at 1071.157 kb on - strand, within EX28DRAFT_1060 at 1071.158 kb on + strand, within EX28DRAFT_1060 at 1071.158 kb on + strand, within EX28DRAFT_1060 at 1071.158 kb on + strand, within EX28DRAFT_1060 at 1071.158 kb on + strand, within EX28DRAFT_1060 at 1071.158 kb on + strand, within EX28DRAFT_1060 at 1071.158 kb on + strand, within EX28DRAFT_1060 at 1071.159 kb on - strand, within EX28DRAFT_1060 at 1071.159 kb on - strand, within EX28DRAFT_1060 at 1071.159 kb on - strand, within EX28DRAFT_1060 at 1071.159 kb on - strand, within EX28DRAFT_1060 at 1071.159 kb on - strand, within EX28DRAFT_1060 at 1071.340 kb on + strand at 1071.367 kb on + strand at 1071.395 kb on + strand at 1071.642 kb on - strand, within EX28DRAFT_1061 at 1071.644 kb on - strand, within EX28DRAFT_1061 at 1071.644 kb on - strand, within EX28DRAFT_1061 at 1071.644 kb on - strand, within EX28DRAFT_1061 at 1071.653 kb on + strand, within EX28DRAFT_1061 at 1071.653 kb on + strand, within EX28DRAFT_1061 at 1071.654 kb on - strand, within EX28DRAFT_1061 at 1071.671 kb on - strand, within EX28DRAFT_1061 at 1071.887 kb on + strand, within EX28DRAFT_1061 at 1071.924 kb on - strand, within EX28DRAFT_1061 at 1072.227 kb on - strand, within EX28DRAFT_1061 at 1072.353 kb on - strand, within EX28DRAFT_1061 at 1072.353 kb on - strand, within EX28DRAFT_1061 at 1072.409 kb on - strand, within EX28DRAFT_1061 at 1072.409 kb on - strand, within EX28DRAFT_1061 at 1072.541 kb on + strand, within EX28DRAFT_1061 at 1072.560 kb on + strand, within EX28DRAFT_1061 at 1072.566 kb on - strand, within EX28DRAFT_1061 at 1072.726 kb on + strand, within EX28DRAFT_1061 at 1072.726 kb on + strand, within EX28DRAFT_1061 at 1072.727 kb on - strand, within EX28DRAFT_1061 at 1072.836 kb on - strand, within EX28DRAFT_1061 at 1072.956 kb on - strand at 1072.994 kb on - strand at 1073.141 kb on - strand at 1073.142 kb on + strand at 1073.142 kb on + strand at 1073.220 kb on - strand, within EX28DRAFT_1062 at 1073.293 kb on + strand, within EX28DRAFT_1062 at 1073.294 kb on - strand, within EX28DRAFT_1062 at 1073.297 kb on - strand, within EX28DRAFT_1062 at 1073.410 kb on + strand, within EX28DRAFT_1062 at 1073.410 kb on + strand, within EX28DRAFT_1062 at 1073.606 kb on - strand, within EX28DRAFT_1062 at 1073.676 kb on + strand, within EX28DRAFT_1062 at 1073.756 kb on - strand, within EX28DRAFT_1062 at 1073.769 kb on - strand, within EX28DRAFT_1062 at 1073.769 kb on - strand, within EX28DRAFT_1062
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 1,070,967 + EX28DRAFT_1060 0.67 +0.0 1,070,967 + EX28DRAFT_1060 0.67 -0.5 1,070,968 - EX28DRAFT_1060 0.67 -0.8 1,070,968 - EX28DRAFT_1060 0.67 -0.4 1,070,968 - EX28DRAFT_1060 0.67 +0.1 1,071,050 + EX28DRAFT_1060 0.76 +0.2 1,071,156 + EX28DRAFT_1060 0.86 -0.0 1,071,156 + EX28DRAFT_1060 0.86 +0.4 1,071,156 + EX28DRAFT_1060 0.86 +0.7 1,071,156 + EX28DRAFT_1060 0.86 +0.5 1,071,157 - EX28DRAFT_1060 0.86 +0.3 1,071,157 - EX28DRAFT_1060 0.86 -0.1 1,071,157 - EX28DRAFT_1060 0.86 +0.5 1,071,158 + EX28DRAFT_1060 0.86 -0.9 1,071,158 + EX28DRAFT_1060 0.86 -0.3 1,071,158 + EX28DRAFT_1060 0.86 +0.4 1,071,158 + EX28DRAFT_1060 0.86 +0.1 1,071,158 + EX28DRAFT_1060 0.86 -0.1 1,071,158 + EX28DRAFT_1060 0.86 +0.9 1,071,159 - EX28DRAFT_1060 0.87 +0.1 1,071,159 - EX28DRAFT_1060 0.87 -0.7 1,071,159 - EX28DRAFT_1060 0.87 +2.3 1,071,159 - EX28DRAFT_1060 0.87 -0.0 1,071,159 - EX28DRAFT_1060 0.87 -0.2 1,071,340 + -0.2 1,071,367 + -0.5 1,071,395 + -1.0 1,071,642 - EX28DRAFT_1061 0.18 -0.5 1,071,644 - EX28DRAFT_1061 0.18 +0.2 1,071,644 - EX28DRAFT_1061 0.18 +0.0 1,071,644 - EX28DRAFT_1061 0.18 -0.3 1,071,653 + EX28DRAFT_1061 0.19 -0.2 1,071,653 + EX28DRAFT_1061 0.19 +0.5 1,071,654 - EX28DRAFT_1061 0.19 +0.1 1,071,671 - EX28DRAFT_1061 0.20 +1.6 1,071,887 + EX28DRAFT_1061 0.33 -1.6 1,071,924 - EX28DRAFT_1061 0.35 -0.1 1,072,227 - EX28DRAFT_1061 0.53 -0.7 1,072,353 - EX28DRAFT_1061 0.60 -0.5 1,072,353 - EX28DRAFT_1061 0.60 +0.3 1,072,409 - EX28DRAFT_1061 0.63 -1.2 1,072,409 - EX28DRAFT_1061 0.63 -1.0 1,072,541 + EX28DRAFT_1061 0.71 -0.5 1,072,560 + EX28DRAFT_1061 0.72 +0.3 1,072,566 - EX28DRAFT_1061 0.73 -0.1 1,072,726 + EX28DRAFT_1061 0.82 -0.6 1,072,726 + EX28DRAFT_1061 0.82 -0.2 1,072,727 - EX28DRAFT_1061 0.82 +0.4 1,072,836 - EX28DRAFT_1061 0.89 +0.5 1,072,956 - -0.3 1,072,994 - -1.1 1,073,141 - -0.1 1,073,142 + -0.0 1,073,142 + -0.5 1,073,220 - EX28DRAFT_1062 0.17 +0.7 1,073,293 + EX28DRAFT_1062 0.25 +0.3 1,073,294 - EX28DRAFT_1062 0.25 +0.9 1,073,297 - EX28DRAFT_1062 0.25 +1.1 1,073,410 + EX28DRAFT_1062 0.37 +1.7 1,073,410 + EX28DRAFT_1062 0.37 -0.9 1,073,606 - EX28DRAFT_1062 0.58 -2.5 1,073,676 + EX28DRAFT_1062 0.65 -0.5 1,073,756 - EX28DRAFT_1062 0.74 +0.1 1,073,769 - EX28DRAFT_1062 0.75 +0.7 1,073,769 - EX28DRAFT_1062 0.75 -1.1
Or see this region's nucleotide sequence