Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1042 and EX28DRAFT_1043 are separated by 119 nucleotides EX28DRAFT_1043 and EX28DRAFT_1044 are separated by 242 nucleotides
EX28DRAFT_1042: EX28DRAFT_1042 - Transcriptional regulators, at 1,051,653 to 1,052,321
_1042
EX28DRAFT_1043: EX28DRAFT_1043 - TonB-dependent siderophore receptor, at 1,052,441 to 1,054,555
_1043
EX28DRAFT_1044: EX28DRAFT_1044 - 40-residue YVTN family beta-propeller repeat, at 1,054,798 to 1,055,859
_1044
Position (kb)
1052
1053
1054
1055 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1051.449 kb on + strand at 1051.449 kb on + strand at 1051.450 kb on - strand at 1051.450 kb on - strand at 1051.450 kb on - strand at 1051.459 kb on - strand at 1051.462 kb on + strand at 1051.547 kb on + strand at 1051.548 kb on - strand at 1051.548 kb on - strand at 1051.628 kb on + strand at 1051.698 kb on - strand at 1051.769 kb on + strand, within EX28DRAFT_1042 at 1051.792 kb on + strand, within EX28DRAFT_1042 at 1051.802 kb on + strand, within EX28DRAFT_1042 at 1051.906 kb on - strand, within EX28DRAFT_1042 at 1052.082 kb on - strand, within EX28DRAFT_1042 at 1052.202 kb on + strand, within EX28DRAFT_1042 at 1052.202 kb on + strand, within EX28DRAFT_1042 at 1052.202 kb on + strand, within EX28DRAFT_1042 at 1052.202 kb on + strand, within EX28DRAFT_1042 at 1052.203 kb on - strand, within EX28DRAFT_1042 at 1052.208 kb on + strand, within EX28DRAFT_1042 at 1052.270 kb on + strand at 1052.299 kb on + strand at 1052.319 kb on + strand at 1052.319 kb on + strand at 1052.327 kb on + strand at 1052.356 kb on + strand at 1052.357 kb on - strand at 1052.375 kb on + strand at 1052.390 kb on + strand at 1052.390 kb on + strand at 1052.391 kb on - strand at 1052.419 kb on + strand at 1052.419 kb on + strand at 1052.502 kb on + strand at 1052.601 kb on + strand at 1052.638 kb on + strand at 1052.639 kb on - strand at 1052.641 kb on - strand at 1052.689 kb on + strand, within EX28DRAFT_1043 at 1052.689 kb on + strand, within EX28DRAFT_1043 at 1052.689 kb on + strand, within EX28DRAFT_1043 at 1052.689 kb on + strand, within EX28DRAFT_1043 at 1052.691 kb on + strand, within EX28DRAFT_1043 at 1052.692 kb on - strand, within EX28DRAFT_1043 at 1052.789 kb on - strand, within EX28DRAFT_1043 at 1052.835 kb on + strand, within EX28DRAFT_1043 at 1052.836 kb on - strand, within EX28DRAFT_1043 at 1052.927 kb on - strand, within EX28DRAFT_1043 at 1053.153 kb on + strand, within EX28DRAFT_1043 at 1053.213 kb on + strand, within EX28DRAFT_1043 at 1053.256 kb on - strand, within EX28DRAFT_1043 at 1053.345 kb on + strand, within EX28DRAFT_1043 at 1053.371 kb on - strand, within EX28DRAFT_1043 at 1053.488 kb on - strand, within EX28DRAFT_1043 at 1053.645 kb on + strand, within EX28DRAFT_1043 at 1053.735 kb on + strand, within EX28DRAFT_1043 at 1053.736 kb on - strand, within EX28DRAFT_1043 at 1053.736 kb on - strand, within EX28DRAFT_1043 at 1054.035 kb on + strand, within EX28DRAFT_1043 at 1054.087 kb on + strand, within EX28DRAFT_1043 at 1054.224 kb on + strand, within EX28DRAFT_1043 at 1054.224 kb on + strand, within EX28DRAFT_1043 at 1054.224 kb on + strand, within EX28DRAFT_1043 at 1054.224 kb on + strand, within EX28DRAFT_1043 at 1054.224 kb on + strand, within EX28DRAFT_1043 at 1054.225 kb on - strand, within EX28DRAFT_1043 at 1054.225 kb on - strand, within EX28DRAFT_1043 at 1054.225 kb on - strand, within EX28DRAFT_1043 at 1054.228 kb on + strand, within EX28DRAFT_1043 at 1054.228 kb on + strand, within EX28DRAFT_1043 at 1054.299 kb on + strand, within EX28DRAFT_1043 at 1054.299 kb on + strand, within EX28DRAFT_1043 at 1054.299 kb on + strand, within EX28DRAFT_1043 at 1054.299 kb on + strand, within EX28DRAFT_1043 at 1054.300 kb on - strand, within EX28DRAFT_1043 at 1054.300 kb on - strand, within EX28DRAFT_1043 at 1054.559 kb on + strand at 1054.559 kb on + strand at 1054.576 kb on + strand at 1054.612 kb on - strand at 1054.639 kb on - strand at 1055.263 kb on + strand, within EX28DRAFT_1044 at 1055.263 kb on + strand, within EX28DRAFT_1044 at 1055.263 kb on + strand, within EX28DRAFT_1044 at 1055.353 kb on + strand, within EX28DRAFT_1044 at 1055.353 kb on + strand, within EX28DRAFT_1044 at 1055.353 kb on + strand, within EX28DRAFT_1044 at 1055.353 kb on + strand, within EX28DRAFT_1044 at 1055.495 kb on - strand, within EX28DRAFT_1044
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 1,051,449 + -0.5 1,051,449 + -1.3 1,051,450 - -0.2 1,051,450 - -0.2 1,051,450 - +0.5 1,051,459 - +0.4 1,051,462 + -0.5 1,051,547 + -0.2 1,051,548 - -0.4 1,051,548 - +0.8 1,051,628 + -0.3 1,051,698 - +0.6 1,051,769 + EX28DRAFT_1042 0.17 +0.9 1,051,792 + EX28DRAFT_1042 0.21 +0.7 1,051,802 + EX28DRAFT_1042 0.22 -0.4 1,051,906 - EX28DRAFT_1042 0.38 -0.4 1,052,082 - EX28DRAFT_1042 0.64 +0.5 1,052,202 + EX28DRAFT_1042 0.82 +2.5 1,052,202 + EX28DRAFT_1042 0.82 +2.1 1,052,202 + EX28DRAFT_1042 0.82 -0.5 1,052,202 + EX28DRAFT_1042 0.82 +1.5 1,052,203 - EX28DRAFT_1042 0.82 -0.0 1,052,208 + EX28DRAFT_1042 0.83 -1.3 1,052,270 + +0.4 1,052,299 + +2.5 1,052,319 + +1.1 1,052,319 + +0.6 1,052,327 + +0.5 1,052,356 + +1.5 1,052,357 - -0.5 1,052,375 + +0.2 1,052,390 + +0.3 1,052,390 + -0.2 1,052,391 - -0.7 1,052,419 + +0.9 1,052,419 + +0.2 1,052,502 + -0.1 1,052,601 + -0.1 1,052,638 + +0.4 1,052,639 - -0.2 1,052,641 - -0.5 1,052,689 + EX28DRAFT_1043 0.12 -0.3 1,052,689 + EX28DRAFT_1043 0.12 -0.5 1,052,689 + EX28DRAFT_1043 0.12 -2.1 1,052,689 + EX28DRAFT_1043 0.12 -0.8 1,052,691 + EX28DRAFT_1043 0.12 -0.9 1,052,692 - EX28DRAFT_1043 0.12 -0.1 1,052,789 - EX28DRAFT_1043 0.16 -0.5 1,052,835 + EX28DRAFT_1043 0.19 +2.2 1,052,836 - EX28DRAFT_1043 0.19 +0.6 1,052,927 - EX28DRAFT_1043 0.23 +0.1 1,053,153 + EX28DRAFT_1043 0.34 -0.1 1,053,213 + EX28DRAFT_1043 0.37 -0.2 1,053,256 - EX28DRAFT_1043 0.39 +0.5 1,053,345 + EX28DRAFT_1043 0.43 +1.0 1,053,371 - EX28DRAFT_1043 0.44 +1.1 1,053,488 - EX28DRAFT_1043 0.50 +0.4 1,053,645 + EX28DRAFT_1043 0.57 +1.1 1,053,735 + EX28DRAFT_1043 0.61 +0.7 1,053,736 - EX28DRAFT_1043 0.61 +0.3 1,053,736 - EX28DRAFT_1043 0.61 +0.1 1,054,035 + EX28DRAFT_1043 0.75 +1.3 1,054,087 + EX28DRAFT_1043 0.78 -0.2 1,054,224 + EX28DRAFT_1043 0.84 +1.4 1,054,224 + EX28DRAFT_1043 0.84 -3.8 1,054,224 + EX28DRAFT_1043 0.84 -0.3 1,054,224 + EX28DRAFT_1043 0.84 -4.1 1,054,224 + EX28DRAFT_1043 0.84 -1.5 1,054,225 - EX28DRAFT_1043 0.84 -0.5 1,054,225 - EX28DRAFT_1043 0.84 -0.0 1,054,225 - EX28DRAFT_1043 0.84 +0.4 1,054,228 + EX28DRAFT_1043 0.84 -0.4 1,054,228 + EX28DRAFT_1043 0.84 -0.5 1,054,299 + EX28DRAFT_1043 0.88 +0.7 1,054,299 + EX28DRAFT_1043 0.88 -0.2 1,054,299 + EX28DRAFT_1043 0.88 -1.4 1,054,299 + EX28DRAFT_1043 0.88 +0.7 1,054,300 - EX28DRAFT_1043 0.88 -0.6 1,054,300 - EX28DRAFT_1043 0.88 +0.4 1,054,559 + +0.1 1,054,559 + -0.1 1,054,576 + +0.6 1,054,612 - -1.6 1,054,639 - -0.8 1,055,263 + EX28DRAFT_1044 0.44 +0.2 1,055,263 + EX28DRAFT_1044 0.44 +0.2 1,055,263 + EX28DRAFT_1044 0.44 -0.2 1,055,353 + EX28DRAFT_1044 0.52 -0.5 1,055,353 + EX28DRAFT_1044 0.52 +0.3 1,055,353 + EX28DRAFT_1044 0.52 -0.7 1,055,353 + EX28DRAFT_1044 0.52 -0.2 1,055,495 - EX28DRAFT_1044 0.66 +0.3
Or see this region's nucleotide sequence