Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1007 and EX28DRAFT_1008 are separated by 245 nucleotides EX28DRAFT_1008 and EX28DRAFT_1009 are separated by 428 nucleotides EX28DRAFT_1009 and EX28DRAFT_1010 are separated by 451 nucleotides
EX28DRAFT_1007: EX28DRAFT_1007 - Predicted ATPase of the PP-loop superfamily implicated in cell cycle control, at 1,013,130 to 1,014,065
_1007
EX28DRAFT_1008: EX28DRAFT_1008 - Cupin domain, at 1,014,311 to 1,014,631
_1008
EX28DRAFT_1009: EX28DRAFT_1009 - hypothetical protein, at 1,015,060 to 1,015,287
_1009
EX28DRAFT_1010: EX28DRAFT_1010 - Cold shock proteins, at 1,015,739 to 1,015,957
_1010
Position (kb)
1015
1016 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1014.163 kb on - strand at 1014.211 kb on + strand at 1014.212 kb on - strand at 1014.214 kb on - strand at 1014.214 kb on - strand at 1014.221 kb on + strand at 1014.222 kb on - strand at 1014.230 kb on + strand at 1014.247 kb on + strand at 1014.247 kb on + strand at 1014.250 kb on - strand at 1014.266 kb on + strand at 1014.266 kb on + strand at 1014.267 kb on - strand at 1014.267 kb on - strand at 1014.267 kb on - strand at 1014.268 kb on + strand at 1014.269 kb on - strand at 1014.284 kb on + strand at 1014.295 kb on - strand at 1014.309 kb on + strand at 1014.310 kb on - strand at 1014.368 kb on - strand, within EX28DRAFT_1008 at 1014.373 kb on - strand, within EX28DRAFT_1008 at 1014.442 kb on - strand, within EX28DRAFT_1008 at 1014.442 kb on - strand, within EX28DRAFT_1008 at 1014.502 kb on + strand, within EX28DRAFT_1008 at 1014.533 kb on + strand, within EX28DRAFT_1008 at 1014.533 kb on + strand, within EX28DRAFT_1008 at 1014.534 kb on - strand, within EX28DRAFT_1008 at 1014.536 kb on - strand, within EX28DRAFT_1008 at 1014.559 kb on + strand, within EX28DRAFT_1008 at 1014.706 kb on - strand at 1014.738 kb on + strand at 1014.739 kb on - strand at 1014.744 kb on - strand at 1014.744 kb on - strand at 1014.744 kb on - strand at 1014.746 kb on - strand at 1014.746 kb on - strand at 1014.902 kb on - strand at 1015.183 kb on + strand, within EX28DRAFT_1009 at 1015.234 kb on + strand, within EX28DRAFT_1009 at 1015.287 kb on + strand at 1015.353 kb on + strand at 1015.354 kb on - strand at 1015.558 kb on + strand at 1015.682 kb on - strand at 1015.962 kb on - strand at 1016.280 kb on - strand at 1016.280 kb on - strand at 1016.281 kb on + strand at 1016.282 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 1,014,163 - -0.1 1,014,211 + +0.9 1,014,212 - +1.5 1,014,214 - -0.0 1,014,214 - -0.1 1,014,221 + -0.4 1,014,222 - +0.3 1,014,230 + -0.6 1,014,247 + -2.1 1,014,247 + -0.0 1,014,250 - +1.8 1,014,266 + -0.5 1,014,266 + +1.0 1,014,267 - +0.4 1,014,267 - -0.6 1,014,267 - -0.3 1,014,268 + +0.5 1,014,269 - +0.5 1,014,284 + +0.1 1,014,295 - +0.7 1,014,309 + +1.1 1,014,310 - -0.5 1,014,368 - EX28DRAFT_1008 0.18 +0.9 1,014,373 - EX28DRAFT_1008 0.19 +0.5 1,014,442 - EX28DRAFT_1008 0.41 -0.2 1,014,442 - EX28DRAFT_1008 0.41 +0.0 1,014,502 + EX28DRAFT_1008 0.60 -0.7 1,014,533 + EX28DRAFT_1008 0.69 +2.1 1,014,533 + EX28DRAFT_1008 0.69 -1.0 1,014,534 - EX28DRAFT_1008 0.69 +0.0 1,014,536 - EX28DRAFT_1008 0.70 +0.3 1,014,559 + EX28DRAFT_1008 0.77 +0.3 1,014,706 - +0.7 1,014,738 + -0.6 1,014,739 - +0.2 1,014,744 - +0.2 1,014,744 - +0.3 1,014,744 - +0.2 1,014,746 - -0.2 1,014,746 - +0.2 1,014,902 - +1.1 1,015,183 + EX28DRAFT_1009 0.54 +0.3 1,015,234 + EX28DRAFT_1009 0.76 -1.9 1,015,287 + -0.0 1,015,353 + +0.7 1,015,354 - -0.0 1,015,558 + +3.0 1,015,682 - -0.1 1,015,962 - -1.0 1,016,280 - +0.2 1,016,280 - +1.1 1,016,281 + +0.4 1,016,282 - -0.6
Or see this region's nucleotide sequence