Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0949 and EX28DRAFT_0950 are separated by 37 nucleotides EX28DRAFT_0950 and EX28DRAFT_0951 are separated by 164 nucleotides EX28DRAFT_0951 and EX28DRAFT_0952 are separated by 148 nucleotides EX28DRAFT_0952 and EX28DRAFT_0953 are separated by 6 nucleotides
EX28DRAFT_0949: EX28DRAFT_0949 - aconitate hydratase 1, at 948,141 to 950,816
_0949
EX28DRAFT_0950: EX28DRAFT_0950 - GTP cyclohydrolase II, at 950,854 to 951,444
_0950
EX28DRAFT_0951: EX28DRAFT_0951 - Membrane-associated phospholipid phosphatase, at 951,609 to 952,409
_0951
EX28DRAFT_0952: EX28DRAFT_0952 - Predicted membrane protein, at 952,558 to 952,866
_0952
EX28DRAFT_0953: EX28DRAFT_0953 - Predicted N-acetylglucosaminyl transferase, at 952,873 to 954,042
_0953
Position (kb) 951
952
953 Strain fitness (log2 ratio) -2
-1
0
1 at 950.621 kb on + strand at 950.763 kb on + strand at 950.763 kb on + strand at 950.764 kb on - strand at 950.764 kb on - strand at 950.785 kb on + strand at 950.786 kb on - strand at 950.790 kb on + strand at 950.791 kb on - strand at 950.849 kb on + strand at 950.850 kb on - strand at 950.853 kb on - strand at 951.553 kb on + strand at 951.553 kb on + strand at 951.553 kb on + strand at 951.553 kb on + strand at 951.553 kb on + strand at 951.554 kb on - strand at 951.554 kb on - strand at 951.554 kb on - strand at 951.554 kb on - strand at 951.555 kb on + strand at 951.555 kb on + strand at 951.555 kb on + strand at 951.556 kb on - strand at 951.582 kb on + strand at 951.609 kb on - strand at 951.609 kb on - strand at 951.692 kb on + strand, within EX28DRAFT_0951 at 951.692 kb on + strand, within EX28DRAFT_0951 at 951.746 kb on + strand, within EX28DRAFT_0951 at 951.747 kb on - strand, within EX28DRAFT_0951 at 951.747 kb on - strand, within EX28DRAFT_0951 at 951.755 kb on + strand, within EX28DRAFT_0951 at 951.803 kb on + strand, within EX28DRAFT_0951 at 951.881 kb on + strand, within EX28DRAFT_0951 at 952.013 kb on - strand, within EX28DRAFT_0951 at 952.067 kb on + strand, within EX28DRAFT_0951 at 952.130 kb on + strand, within EX28DRAFT_0951 at 952.418 kb on - strand at 952.435 kb on + strand at 952.494 kb on + strand at 952.494 kb on + strand at 952.554 kb on + strand at 952.647 kb on + strand, within EX28DRAFT_0952 at 952.700 kb on + strand, within EX28DRAFT_0952
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 950,621 + -0.6 950,763 + +0.2 950,763 + +0.5 950,764 - +1.1 950,764 - -0.5 950,785 + +0.6 950,786 - +0.8 950,790 + +0.4 950,791 - +0.0 950,849 + -0.8 950,850 - -0.6 950,853 - -0.5 951,553 + -0.0 951,553 + +1.1 951,553 + -0.6 951,553 + +1.0 951,553 + +0.1 951,554 - -0.5 951,554 - +0.1 951,554 - +0.2 951,554 - -1.2 951,555 + -0.5 951,555 + +0.2 951,555 + +0.3 951,556 - +0.5 951,582 + -0.2 951,609 - +0.1 951,609 - -0.6 951,692 + EX28DRAFT_0951 0.10 -0.3 951,692 + EX28DRAFT_0951 0.10 +0.2 951,746 + EX28DRAFT_0951 0.17 -0.1 951,747 - EX28DRAFT_0951 0.17 +1.5 951,747 - EX28DRAFT_0951 0.17 -0.2 951,755 + EX28DRAFT_0951 0.18 -0.1 951,803 + EX28DRAFT_0951 0.24 +0.5 951,881 + EX28DRAFT_0951 0.34 +0.5 952,013 - EX28DRAFT_0951 0.50 +0.6 952,067 + EX28DRAFT_0951 0.57 -0.2 952,130 + EX28DRAFT_0951 0.65 +0.1 952,418 - -0.5 952,435 + +0.4 952,494 + +0.4 952,494 + -2.5 952,554 + -0.5 952,647 + EX28DRAFT_0952 0.29 -0.3 952,700 + EX28DRAFT_0952 0.46 +0.5
Or see this region's nucleotide sequence