Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0909 and EX28DRAFT_0910 overlap by 1 nucleotides EX28DRAFT_0910 and EX28DRAFT_0911 are separated by 154 nucleotides EX28DRAFT_0911 and EX28DRAFT_0912 are separated by 12 nucleotides EX28DRAFT_0912 and EX28DRAFT_0913 are separated by 60 nucleotides EX28DRAFT_0913 and EX28DRAFT_0914 are separated by 32 nucleotides
EX28DRAFT_0909: EX28DRAFT_0909 - Phage-related tail fibre protein, at 911,229 to 913,094
_0909
EX28DRAFT_0910: EX28DRAFT_0910 - Caudovirales tail fibre assembly protein, at 913,094 to 913,702
_0910
EX28DRAFT_0911: EX28DRAFT_0911 - Phage tail sheath protein FI, at 913,857 to 915,050
_0911
EX28DRAFT_0912: EX28DRAFT_0912 - phage contractile tail tube protein, P2 family, at 915,063 to 915,581
_0912
EX28DRAFT_0913: EX28DRAFT_0913 - Mu-like prophage FluMu protein gp41, at 915,642 to 915,950
_0913
EX28DRAFT_0914: EX28DRAFT_0914 - Phage P2 GpE, at 915,983 to 916,105
_0914
Position (kb) 913
914
915
916 Strain fitness (log2 ratio) -2
-1
0
1 at 913.055 kb on + strand at 913.154 kb on - strand at 913.443 kb on + strand, within EX28DRAFT_0910 at 913.477 kb on + strand, within EX28DRAFT_0910 at 913.546 kb on + strand, within EX28DRAFT_0910 at 913.763 kb on + strand at 913.764 kb on - strand at 913.764 kb on - strand at 913.808 kb on + strand at 913.867 kb on - strand at 914.030 kb on + strand, within EX28DRAFT_0911 at 914.286 kb on - strand, within EX28DRAFT_0911 at 914.388 kb on + strand, within EX28DRAFT_0911 at 914.388 kb on + strand, within EX28DRAFT_0911 at 914.676 kb on - strand, within EX28DRAFT_0911 at 914.871 kb on + strand, within EX28DRAFT_0911 at 914.943 kb on + strand at 914.944 kb on - strand at 914.953 kb on - strand at 915.015 kb on + strand at 915.015 kb on + strand at 915.015 kb on + strand at 915.015 kb on + strand at 915.015 kb on + strand at 915.071 kb on - strand at 915.087 kb on + strand at 915.117 kb on + strand, within EX28DRAFT_0912 at 915.118 kb on - strand, within EX28DRAFT_0912 at 915.360 kb on - strand, within EX28DRAFT_0912 at 915.403 kb on - strand, within EX28DRAFT_0912 at 915.465 kb on + strand, within EX28DRAFT_0912 at 915.465 kb on + strand, within EX28DRAFT_0912 at 915.616 kb on + strand at 915.616 kb on + strand at 915.616 kb on + strand at 915.617 kb on - strand at 915.846 kb on + strand, within EX28DRAFT_0913 at 916.002 kb on + strand, within EX28DRAFT_0914 at 916.002 kb on + strand, within EX28DRAFT_0914 at 916.026 kb on + strand, within EX28DRAFT_0914
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 913,055 + -0.2 913,154 - -0.4 913,443 + EX28DRAFT_0910 0.57 -0.9 913,477 + EX28DRAFT_0910 0.63 +0.7 913,546 + EX28DRAFT_0910 0.74 -0.0 913,763 + +0.5 913,764 - -0.0 913,764 - +0.7 913,808 + +0.4 913,867 - +0.1 914,030 + EX28DRAFT_0911 0.14 -0.4 914,286 - EX28DRAFT_0911 0.36 +0.8 914,388 + EX28DRAFT_0911 0.44 -0.2 914,388 + EX28DRAFT_0911 0.44 -0.1 914,676 - EX28DRAFT_0911 0.69 -0.7 914,871 + EX28DRAFT_0911 0.85 -0.4 914,943 + +0.1 914,944 - -1.1 914,953 - +0.3 915,015 + +0.6 915,015 + +0.2 915,015 + -0.3 915,015 + +0.0 915,015 + +0.1 915,071 - -2.4 915,087 + -0.4 915,117 + EX28DRAFT_0912 0.10 +0.1 915,118 - EX28DRAFT_0912 0.11 -0.0 915,360 - EX28DRAFT_0912 0.57 -1.1 915,403 - EX28DRAFT_0912 0.66 -0.4 915,465 + EX28DRAFT_0912 0.77 +0.0 915,465 + EX28DRAFT_0912 0.77 +0.0 915,616 + +0.5 915,616 + -0.6 915,616 + +1.7 915,617 - +0.6 915,846 + EX28DRAFT_0913 0.66 -0.2 916,002 + EX28DRAFT_0914 0.15 +0.9 916,002 + EX28DRAFT_0914 0.15 -0.2 916,026 + EX28DRAFT_0914 0.35 -0.6
Or see this region's nucleotide sequence