Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0792 and EX28DRAFT_0793 are separated by 75 nucleotides EX28DRAFT_0793 and EX28DRAFT_0794 are separated by 3 nucleotides EX28DRAFT_0794 and EX28DRAFT_0795 are separated by 54 nucleotides EX28DRAFT_0795 and EX28DRAFT_0796 are separated by 50 nucleotides EX28DRAFT_0796 and EX28DRAFT_0797 are separated by 179 nucleotides
EX28DRAFT_0792: EX28DRAFT_0792 - type VI secretion-associated protein, ImpA family, at 793,967 to 794,983
_0792
EX28DRAFT_0793: EX28DRAFT_0793 - type VI secretion protein, VC_A0107 family, at 795,059 to 795,583
_0793
EX28DRAFT_0794: EX28DRAFT_0794 - type VI secretion protein, EvpB/VC_A0108 family, at 795,587 to 797,086
_0794
EX28DRAFT_0795: EX28DRAFT_0795 - hypothetical protein, at 797,141 to 797,374
_0795
EX28DRAFT_0796: EX28DRAFT_0796 - hypothetical protein, at 797,425 to 797,844
_0796
EX28DRAFT_0797: EX28DRAFT_0797 - Hemolysin-coregulated protein (uncharacterized), at 798,024 to 798,506
_0797
Position (kb) 795
796
797
798 Strain fitness (log2 ratio) -2
-1
0
1
2 at 794.670 kb on + strand, within EX28DRAFT_0792 at 794.834 kb on + strand, within EX28DRAFT_0792 at 794.835 kb on - strand, within EX28DRAFT_0792 at 794.846 kb on + strand, within EX28DRAFT_0792 at 794.905 kb on + strand at 794.906 kb on - strand at 795.097 kb on + strand at 795.098 kb on - strand at 795.098 kb on - strand at 795.133 kb on - strand, within EX28DRAFT_0793 at 795.140 kb on + strand, within EX28DRAFT_0793 at 795.140 kb on + strand, within EX28DRAFT_0793 at 795.141 kb on - strand, within EX28DRAFT_0793 at 795.141 kb on - strand, within EX28DRAFT_0793 at 795.141 kb on - strand, within EX28DRAFT_0793 at 795.155 kb on - strand, within EX28DRAFT_0793 at 795.238 kb on + strand, within EX28DRAFT_0793 at 795.337 kb on + strand, within EX28DRAFT_0793 at 795.337 kb on + strand, within EX28DRAFT_0793 at 795.338 kb on - strand, within EX28DRAFT_0793 at 795.462 kb on - strand, within EX28DRAFT_0793 at 795.462 kb on - strand, within EX28DRAFT_0793 at 795.462 kb on - strand, within EX28DRAFT_0793 at 795.462 kb on - strand, within EX28DRAFT_0793 at 795.462 kb on - strand, within EX28DRAFT_0793 at 795.572 kb on - strand at 795.582 kb on - strand at 795.582 kb on - strand at 795.770 kb on - strand, within EX28DRAFT_0794 at 795.773 kb on + strand, within EX28DRAFT_0794 at 795.773 kb on + strand, within EX28DRAFT_0794 at 795.938 kb on - strand, within EX28DRAFT_0794 at 795.938 kb on - strand, within EX28DRAFT_0794 at 796.025 kb on + strand, within EX28DRAFT_0794 at 796.038 kb on - strand, within EX28DRAFT_0794 at 796.038 kb on - strand, within EX28DRAFT_0794 at 796.082 kb on + strand, within EX28DRAFT_0794 at 796.086 kb on - strand, within EX28DRAFT_0794 at 796.412 kb on + strand, within EX28DRAFT_0794 at 796.412 kb on + strand, within EX28DRAFT_0794 at 796.412 kb on + strand, within EX28DRAFT_0794 at 796.433 kb on + strand, within EX28DRAFT_0794 at 796.633 kb on + strand, within EX28DRAFT_0794 at 796.709 kb on + strand, within EX28DRAFT_0794 at 796.877 kb on + strand, within EX28DRAFT_0794 at 796.878 kb on - strand, within EX28DRAFT_0794 at 796.980 kb on - strand at 797.054 kb on - strand at 797.094 kb on - strand at 797.115 kb on - strand at 797.135 kb on + strand at 797.136 kb on - strand at 797.195 kb on + strand, within EX28DRAFT_0795 at 797.195 kb on + strand, within EX28DRAFT_0795 at 797.197 kb on + strand, within EX28DRAFT_0795 at 797.198 kb on - strand, within EX28DRAFT_0795 at 797.198 kb on - strand, within EX28DRAFT_0795 at 797.206 kb on - strand, within EX28DRAFT_0795 at 797.208 kb on + strand, within EX28DRAFT_0795 at 797.246 kb on + strand, within EX28DRAFT_0795 at 797.247 kb on - strand, within EX28DRAFT_0795 at 797.305 kb on - strand, within EX28DRAFT_0795 at 797.318 kb on - strand, within EX28DRAFT_0795 at 797.339 kb on + strand, within EX28DRAFT_0795 at 797.340 kb on - strand, within EX28DRAFT_0795 at 797.450 kb on + strand at 797.450 kb on + strand at 797.451 kb on - strand at 797.465 kb on - strand at 797.482 kb on - strand, within EX28DRAFT_0796 at 797.485 kb on + strand, within EX28DRAFT_0796 at 797.532 kb on + strand, within EX28DRAFT_0796 at 797.562 kb on - strand, within EX28DRAFT_0796 at 797.655 kb on + strand, within EX28DRAFT_0796 at 797.656 kb on - strand, within EX28DRAFT_0796 at 797.759 kb on - strand, within EX28DRAFT_0796 at 797.759 kb on - strand, within EX28DRAFT_0796 at 797.802 kb on - strand, within EX28DRAFT_0796 at 797.842 kb on + strand at 797.884 kb on + strand at 797.933 kb on - strand at 797.933 kb on - strand at 797.974 kb on - strand at 797.975 kb on + strand at 797.975 kb on + strand at 797.996 kb on + strand at 798.017 kb on - strand at 798.020 kb on + strand at 798.021 kb on - strand at 798.024 kb on - strand at 798.035 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 794,670 + EX28DRAFT_0792 0.69 -0.1 794,834 + EX28DRAFT_0792 0.85 -1.8 794,835 - EX28DRAFT_0792 0.85 +1.1 794,846 + EX28DRAFT_0792 0.86 +0.6 794,905 + +0.1 794,906 - +1.2 795,097 + +2.4 795,098 - -0.2 795,098 - +0.4 795,133 - EX28DRAFT_0793 0.14 +0.3 795,140 + EX28DRAFT_0793 0.15 +0.2 795,140 + EX28DRAFT_0793 0.15 -0.4 795,141 - EX28DRAFT_0793 0.16 +0.7 795,141 - EX28DRAFT_0793 0.16 -1.4 795,141 - EX28DRAFT_0793 0.16 +2.0 795,155 - EX28DRAFT_0793 0.18 +0.5 795,238 + EX28DRAFT_0793 0.34 +1.4 795,337 + EX28DRAFT_0793 0.53 -0.5 795,337 + EX28DRAFT_0793 0.53 -0.2 795,338 - EX28DRAFT_0793 0.53 -0.0 795,462 - EX28DRAFT_0793 0.77 +0.9 795,462 - EX28DRAFT_0793 0.77 +0.3 795,462 - EX28DRAFT_0793 0.77 +1.2 795,462 - EX28DRAFT_0793 0.77 +0.4 795,462 - EX28DRAFT_0793 0.77 +0.1 795,572 - +0.2 795,582 - -0.2 795,582 - -0.4 795,770 - EX28DRAFT_0794 0.12 -0.8 795,773 + EX28DRAFT_0794 0.12 +1.5 795,773 + EX28DRAFT_0794 0.12 -0.0 795,938 - EX28DRAFT_0794 0.23 -0.1 795,938 - EX28DRAFT_0794 0.23 -0.4 796,025 + EX28DRAFT_0794 0.29 -0.1 796,038 - EX28DRAFT_0794 0.30 +0.3 796,038 - EX28DRAFT_0794 0.30 +0.9 796,082 + EX28DRAFT_0794 0.33 -0.1 796,086 - EX28DRAFT_0794 0.33 +0.5 796,412 + EX28DRAFT_0794 0.55 +0.7 796,412 + EX28DRAFT_0794 0.55 +0.9 796,412 + EX28DRAFT_0794 0.55 -0.8 796,433 + EX28DRAFT_0794 0.56 -0.3 796,633 + EX28DRAFT_0794 0.70 +0.5 796,709 + EX28DRAFT_0794 0.75 +0.3 796,877 + EX28DRAFT_0794 0.86 +0.4 796,878 - EX28DRAFT_0794 0.86 +0.4 796,980 - -0.0 797,054 - -0.0 797,094 - +0.1 797,115 - +0.3 797,135 + +0.6 797,136 - +0.6 797,195 + EX28DRAFT_0795 0.23 +0.4 797,195 + EX28DRAFT_0795 0.23 -0.0 797,197 + EX28DRAFT_0795 0.24 -0.8 797,198 - EX28DRAFT_0795 0.24 -0.1 797,198 - EX28DRAFT_0795 0.24 +2.4 797,206 - EX28DRAFT_0795 0.28 -0.1 797,208 + EX28DRAFT_0795 0.29 +1.6 797,246 + EX28DRAFT_0795 0.45 +0.2 797,247 - EX28DRAFT_0795 0.45 +0.3 797,305 - EX28DRAFT_0795 0.70 -0.4 797,318 - EX28DRAFT_0795 0.76 +0.6 797,339 + EX28DRAFT_0795 0.85 -1.2 797,340 - EX28DRAFT_0795 0.85 +0.6 797,450 + +0.0 797,450 + +0.1 797,451 - +1.1 797,465 - -0.0 797,482 - EX28DRAFT_0796 0.14 -0.2 797,485 + EX28DRAFT_0796 0.14 -0.2 797,532 + EX28DRAFT_0796 0.25 +0.2 797,562 - EX28DRAFT_0796 0.33 -0.2 797,655 + EX28DRAFT_0796 0.55 -0.7 797,656 - EX28DRAFT_0796 0.55 +0.8 797,759 - EX28DRAFT_0796 0.80 -1.5 797,759 - EX28DRAFT_0796 0.80 -0.2 797,802 - EX28DRAFT_0796 0.90 -0.4 797,842 + +0.2 797,884 + +0.3 797,933 - +0.2 797,933 - +0.8 797,974 - +0.6 797,975 + +0.6 797,975 + -0.9 797,996 + +0.1 798,017 - +1.0 798,020 + +0.2 798,021 - +0.6 798,024 - +1.4 798,035 + +0.4
Or see this region's nucleotide sequence