Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0792 and EX28DRAFT_0793 are separated by 75 nucleotides EX28DRAFT_0793 and EX28DRAFT_0794 are separated by 3 nucleotides
EX28DRAFT_0792: EX28DRAFT_0792 - type VI secretion-associated protein, ImpA family, at 793,967 to 794,983
_0792
EX28DRAFT_0793: EX28DRAFT_0793 - type VI secretion protein, VC_A0107 family, at 795,059 to 795,583
_0793
EX28DRAFT_0794: EX28DRAFT_0794 - type VI secretion protein, EvpB/VC_A0108 family, at 795,587 to 797,086
_0794
Position (kb) 795
796 Strain fitness (log2 ratio) -2
-1
0
1
2 at 794.141 kb on + strand, within EX28DRAFT_0792 at 794.142 kb on - strand, within EX28DRAFT_0792 at 794.182 kb on - strand, within EX28DRAFT_0792 at 794.328 kb on - strand, within EX28DRAFT_0792 at 794.359 kb on + strand, within EX28DRAFT_0792 at 794.670 kb on + strand, within EX28DRAFT_0792 at 794.834 kb on + strand, within EX28DRAFT_0792 at 794.835 kb on - strand, within EX28DRAFT_0792 at 794.846 kb on + strand, within EX28DRAFT_0792 at 794.905 kb on + strand at 794.906 kb on - strand at 795.097 kb on + strand at 795.098 kb on - strand at 795.098 kb on - strand at 795.133 kb on - strand, within EX28DRAFT_0793 at 795.140 kb on + strand, within EX28DRAFT_0793 at 795.140 kb on + strand, within EX28DRAFT_0793 at 795.141 kb on - strand, within EX28DRAFT_0793 at 795.141 kb on - strand, within EX28DRAFT_0793 at 795.141 kb on - strand, within EX28DRAFT_0793 at 795.155 kb on - strand, within EX28DRAFT_0793 at 795.238 kb on + strand, within EX28DRAFT_0793 at 795.337 kb on + strand, within EX28DRAFT_0793 at 795.337 kb on + strand, within EX28DRAFT_0793 at 795.338 kb on - strand, within EX28DRAFT_0793 at 795.462 kb on - strand, within EX28DRAFT_0793 at 795.462 kb on - strand, within EX28DRAFT_0793 at 795.462 kb on - strand, within EX28DRAFT_0793 at 795.462 kb on - strand, within EX28DRAFT_0793 at 795.462 kb on - strand, within EX28DRAFT_0793 at 795.572 kb on - strand at 795.582 kb on - strand at 795.582 kb on - strand at 795.770 kb on - strand, within EX28DRAFT_0794 at 795.773 kb on + strand, within EX28DRAFT_0794 at 795.773 kb on + strand, within EX28DRAFT_0794 at 795.938 kb on - strand, within EX28DRAFT_0794 at 795.938 kb on - strand, within EX28DRAFT_0794 at 796.025 kb on + strand, within EX28DRAFT_0794 at 796.038 kb on - strand, within EX28DRAFT_0794 at 796.038 kb on - strand, within EX28DRAFT_0794 at 796.082 kb on + strand, within EX28DRAFT_0794 at 796.086 kb on - strand, within EX28DRAFT_0794 at 796.412 kb on + strand, within EX28DRAFT_0794 at 796.412 kb on + strand, within EX28DRAFT_0794 at 796.412 kb on + strand, within EX28DRAFT_0794 at 796.433 kb on + strand, within EX28DRAFT_0794
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 794,141 + EX28DRAFT_0792 0.17 -0.6 794,142 - EX28DRAFT_0792 0.17 -0.2 794,182 - EX28DRAFT_0792 0.21 -0.0 794,328 - EX28DRAFT_0792 0.35 -0.1 794,359 + EX28DRAFT_0792 0.39 +0.1 794,670 + EX28DRAFT_0792 0.69 -0.1 794,834 + EX28DRAFT_0792 0.85 -1.8 794,835 - EX28DRAFT_0792 0.85 +1.1 794,846 + EX28DRAFT_0792 0.86 +0.6 794,905 + +0.1 794,906 - +1.2 795,097 + +2.4 795,098 - -0.2 795,098 - +0.4 795,133 - EX28DRAFT_0793 0.14 +0.3 795,140 + EX28DRAFT_0793 0.15 +0.2 795,140 + EX28DRAFT_0793 0.15 -0.4 795,141 - EX28DRAFT_0793 0.16 +0.7 795,141 - EX28DRAFT_0793 0.16 -1.4 795,141 - EX28DRAFT_0793 0.16 +2.0 795,155 - EX28DRAFT_0793 0.18 +0.5 795,238 + EX28DRAFT_0793 0.34 +1.4 795,337 + EX28DRAFT_0793 0.53 -0.5 795,337 + EX28DRAFT_0793 0.53 -0.2 795,338 - EX28DRAFT_0793 0.53 -0.0 795,462 - EX28DRAFT_0793 0.77 +0.9 795,462 - EX28DRAFT_0793 0.77 +0.3 795,462 - EX28DRAFT_0793 0.77 +1.2 795,462 - EX28DRAFT_0793 0.77 +0.4 795,462 - EX28DRAFT_0793 0.77 +0.1 795,572 - +0.2 795,582 - -0.2 795,582 - -0.4 795,770 - EX28DRAFT_0794 0.12 -0.8 795,773 + EX28DRAFT_0794 0.12 +1.5 795,773 + EX28DRAFT_0794 0.12 -0.0 795,938 - EX28DRAFT_0794 0.23 -0.1 795,938 - EX28DRAFT_0794 0.23 -0.4 796,025 + EX28DRAFT_0794 0.29 -0.1 796,038 - EX28DRAFT_0794 0.30 +0.3 796,038 - EX28DRAFT_0794 0.30 +0.9 796,082 + EX28DRAFT_0794 0.33 -0.1 796,086 - EX28DRAFT_0794 0.33 +0.5 796,412 + EX28DRAFT_0794 0.55 +0.7 796,412 + EX28DRAFT_0794 0.55 +0.9 796,412 + EX28DRAFT_0794 0.55 -0.8 796,433 + EX28DRAFT_0794 0.56 -0.3
Or see this region's nucleotide sequence