Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0704 and EX28DRAFT_0705 are separated by 232 nucleotides EX28DRAFT_0705 and EX28DRAFT_0706 are separated by 39 nucleotides EX28DRAFT_0706 and EX28DRAFT_0707 are separated by 42 nucleotides
EX28DRAFT_0704: EX28DRAFT_0704 - glucose-6-phosphate 1-dehydrogenase, at 701,898 to 703,373
_0704
EX28DRAFT_0705: EX28DRAFT_0705 - 6-phosphogluconate dehydratase (EC 4.2.1.12), at 703,606 to 705,417
_0705
EX28DRAFT_0706: EX28DRAFT_0706 - Entner-Doudoroff aldolase, at 705,457 to 706,098
_0706
EX28DRAFT_0707: EX28DRAFT_0707 - formate-dependent phosphoribosylglycinamide formyltransferase (EC 6.3.4.-), at 706,141 to 707,319
_0707
Position (kb) 703
704
705
706 Strain fitness (log2 ratio) -2
-1
0
1
2 at 703.371 kb on + strand at 703.376 kb on + strand at 703.819 kb on - strand, within EX28DRAFT_0705 at 703.825 kb on + strand, within EX28DRAFT_0705 at 703.826 kb on - strand, within EX28DRAFT_0705 at 703.834 kb on - strand, within EX28DRAFT_0705 at 703.929 kb on - strand, within EX28DRAFT_0705 at 704.054 kb on - strand, within EX28DRAFT_0705 at 704.195 kb on - strand, within EX28DRAFT_0705 at 704.248 kb on + strand, within EX28DRAFT_0705 at 704.249 kb on - strand, within EX28DRAFT_0705 at 704.249 kb on - strand, within EX28DRAFT_0705 at 704.269 kb on - strand, within EX28DRAFT_0705 at 704.269 kb on - strand, within EX28DRAFT_0705 at 704.269 kb on - strand, within EX28DRAFT_0705 at 704.275 kb on + strand, within EX28DRAFT_0705 at 704.275 kb on + strand, within EX28DRAFT_0705 at 704.276 kb on - strand, within EX28DRAFT_0705 at 704.313 kb on + strand, within EX28DRAFT_0705 at 704.313 kb on + strand, within EX28DRAFT_0705 at 704.560 kb on - strand, within EX28DRAFT_0705 at 704.591 kb on + strand, within EX28DRAFT_0705 at 704.975 kb on + strand, within EX28DRAFT_0705 at 704.975 kb on + strand, within EX28DRAFT_0705 at 704.975 kb on + strand, within EX28DRAFT_0705 at 704.976 kb on - strand, within EX28DRAFT_0705 at 704.976 kb on - strand, within EX28DRAFT_0705 at 705.043 kb on - strand, within EX28DRAFT_0705 at 705.065 kb on + strand, within EX28DRAFT_0705 at 705.066 kb on - strand, within EX28DRAFT_0705 at 705.070 kb on - strand, within EX28DRAFT_0705 at 705.075 kb on + strand, within EX28DRAFT_0705 at 705.075 kb on + strand, within EX28DRAFT_0705 at 705.076 kb on - strand, within EX28DRAFT_0705 at 705.194 kb on - strand, within EX28DRAFT_0705 at 705.263 kb on + strand at 705.264 kb on - strand at 705.310 kb on - strand at 705.405 kb on + strand at 705.406 kb on - strand at 705.408 kb on + strand at 705.415 kb on + strand at 705.431 kb on + strand at 705.431 kb on + strand at 705.545 kb on + strand, within EX28DRAFT_0706 at 705.923 kb on + strand, within EX28DRAFT_0706 at 705.962 kb on - strand, within EX28DRAFT_0706 at 706.097 kb on - strand at 706.270 kb on + strand, within EX28DRAFT_0707 at 706.270 kb on + strand, within EX28DRAFT_0707 at 706.409 kb on - strand, within EX28DRAFT_0707
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 703,371 + +0.3 703,376 + -1.0 703,819 - EX28DRAFT_0705 0.12 -0.3 703,825 + EX28DRAFT_0705 0.12 +0.0 703,826 - EX28DRAFT_0705 0.12 -0.4 703,834 - EX28DRAFT_0705 0.13 -0.0 703,929 - EX28DRAFT_0705 0.18 +0.0 704,054 - EX28DRAFT_0705 0.25 +0.4 704,195 - EX28DRAFT_0705 0.33 +0.0 704,248 + EX28DRAFT_0705 0.35 -0.1 704,249 - EX28DRAFT_0705 0.35 +0.3 704,249 - EX28DRAFT_0705 0.35 +0.8 704,269 - EX28DRAFT_0705 0.37 -0.5 704,269 - EX28DRAFT_0705 0.37 -1.2 704,269 - EX28DRAFT_0705 0.37 -0.6 704,275 + EX28DRAFT_0705 0.37 +0.2 704,275 + EX28DRAFT_0705 0.37 -0.9 704,276 - EX28DRAFT_0705 0.37 -1.9 704,313 + EX28DRAFT_0705 0.39 -0.3 704,313 + EX28DRAFT_0705 0.39 +0.3 704,560 - EX28DRAFT_0705 0.53 +0.3 704,591 + EX28DRAFT_0705 0.54 -0.2 704,975 + EX28DRAFT_0705 0.76 +0.2 704,975 + EX28DRAFT_0705 0.76 -0.5 704,975 + EX28DRAFT_0705 0.76 +0.2 704,976 - EX28DRAFT_0705 0.76 -0.2 704,976 - EX28DRAFT_0705 0.76 -0.8 705,043 - EX28DRAFT_0705 0.79 +2.4 705,065 + EX28DRAFT_0705 0.81 +0.5 705,066 - EX28DRAFT_0705 0.81 -0.5 705,070 - EX28DRAFT_0705 0.81 -0.0 705,075 + EX28DRAFT_0705 0.81 -0.9 705,075 + EX28DRAFT_0705 0.81 -0.3 705,076 - EX28DRAFT_0705 0.81 +0.3 705,194 - EX28DRAFT_0705 0.88 +0.4 705,263 + -0.0 705,264 - -1.0 705,310 - +0.7 705,405 + +0.1 705,406 - -0.0 705,408 + +0.0 705,415 + -0.2 705,431 + -1.6 705,431 + +0.2 705,545 + EX28DRAFT_0706 0.14 -1.2 705,923 + EX28DRAFT_0706 0.73 -1.3 705,962 - EX28DRAFT_0706 0.79 -0.6 706,097 - +0.1 706,270 + EX28DRAFT_0707 0.11 -0.8 706,270 + EX28DRAFT_0707 0.11 -0.2 706,409 - EX28DRAFT_0707 0.23 +0.1
Or see this region's nucleotide sequence