Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0644 and EX28DRAFT_0645 are separated by 33 nucleotides EX28DRAFT_0645 and EX28DRAFT_0646 are separated by 228 nucleotides EX28DRAFT_0646 and EX28DRAFT_0647 are separated by 36 nucleotides
EX28DRAFT_0644: EX28DRAFT_0644 - yecA family protein, at 638,455 to 639,123
_0644
EX28DRAFT_0645: EX28DRAFT_0645 - aromatic amino acid transport protein, at 639,157 to 640,368
_0645
EX28DRAFT_0646: EX28DRAFT_0646 - hypothetical protein, at 640,597 to 640,938
_0646
EX28DRAFT_0647: EX28DRAFT_0647 - Ferritin-like protein, at 640,975 to 641,472
_0647
Position (kb) 639
640
641 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 638.159 kb on - strand at 638.159 kb on - strand at 638.260 kb on + strand at 638.260 kb on + strand at 638.260 kb on + strand at 638.338 kb on + strand at 638.339 kb on - strand at 638.339 kb on - strand at 638.339 kb on - strand at 638.414 kb on + strand at 638.414 kb on + strand at 638.414 kb on + strand at 638.415 kb on - strand at 638.415 kb on - strand at 638.448 kb on - strand at 638.515 kb on + strand at 638.642 kb on - strand, within EX28DRAFT_0644 at 638.642 kb on - strand, within EX28DRAFT_0644 at 638.698 kb on - strand, within EX28DRAFT_0644 at 638.703 kb on + strand, within EX28DRAFT_0644 at 638.703 kb on + strand, within EX28DRAFT_0644 at 638.767 kb on - strand, within EX28DRAFT_0644 at 638.788 kb on + strand, within EX28DRAFT_0644 at 638.788 kb on + strand, within EX28DRAFT_0644 at 638.788 kb on + strand, within EX28DRAFT_0644 at 638.788 kb on + strand, within EX28DRAFT_0644 at 638.788 kb on + strand, within EX28DRAFT_0644 at 638.788 kb on + strand, within EX28DRAFT_0644 at 638.788 kb on + strand, within EX28DRAFT_0644 at 638.788 kb on + strand, within EX28DRAFT_0644 at 638.788 kb on + strand, within EX28DRAFT_0644 at 638.788 kb on + strand, within EX28DRAFT_0644 at 638.789 kb on - strand, within EX28DRAFT_0644 at 638.813 kb on - strand, within EX28DRAFT_0644 at 638.885 kb on + strand, within EX28DRAFT_0644 at 638.885 kb on + strand, within EX28DRAFT_0644 at 638.947 kb on + strand, within EX28DRAFT_0644 at 638.947 kb on + strand, within EX28DRAFT_0644 at 638.947 kb on + strand, within EX28DRAFT_0644 at 638.947 kb on + strand, within EX28DRAFT_0644 at 638.948 kb on - strand, within EX28DRAFT_0644 at 638.948 kb on - strand, within EX28DRAFT_0644 at 638.948 kb on - strand, within EX28DRAFT_0644 at 638.990 kb on + strand, within EX28DRAFT_0644 at 638.992 kb on + strand, within EX28DRAFT_0644 at 639.103 kb on - strand at 639.103 kb on - strand at 639.124 kb on + strand at 639.155 kb on - strand at 639.159 kb on - strand at 639.208 kb on - strand at 639.480 kb on - strand, within EX28DRAFT_0645 at 639.570 kb on + strand, within EX28DRAFT_0645 at 639.750 kb on + strand, within EX28DRAFT_0645 at 639.763 kb on - strand, within EX28DRAFT_0645 at 639.862 kb on - strand, within EX28DRAFT_0645 at 639.862 kb on - strand, within EX28DRAFT_0645 at 640.076 kb on + strand, within EX28DRAFT_0645 at 640.094 kb on + strand, within EX28DRAFT_0645 at 640.114 kb on - strand, within EX28DRAFT_0645 at 640.149 kb on - strand, within EX28DRAFT_0645 at 640.149 kb on - strand, within EX28DRAFT_0645 at 640.197 kb on - strand, within EX28DRAFT_0645 at 640.223 kb on + strand, within EX28DRAFT_0645 at 640.470 kb on - strand at 640.514 kb on + strand at 640.515 kb on - strand at 640.830 kb on + strand, within EX28DRAFT_0646 at 640.831 kb on - strand, within EX28DRAFT_0646 at 640.937 kb on - strand at 640.976 kb on + strand at 641.007 kb on + strand at 641.290 kb on - strand, within EX28DRAFT_0647
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 638,159 - -0.1 638,159 - -0.1 638,260 + -0.4 638,260 + -2.9 638,260 + +1.4 638,338 + +0.1 638,339 - +0.6 638,339 - +0.6 638,339 - +0.4 638,414 + +1.0 638,414 + -0.3 638,414 + +0.5 638,415 - -2.0 638,415 - -0.3 638,448 - +0.8 638,515 + +0.2 638,642 - EX28DRAFT_0644 0.28 +0.5 638,642 - EX28DRAFT_0644 0.28 +0.0 638,698 - EX28DRAFT_0644 0.36 -0.1 638,703 + EX28DRAFT_0644 0.37 +0.1 638,703 + EX28DRAFT_0644 0.37 +0.2 638,767 - EX28DRAFT_0644 0.47 -0.3 638,788 + EX28DRAFT_0644 0.50 +0.3 638,788 + EX28DRAFT_0644 0.50 +0.2 638,788 + EX28DRAFT_0644 0.50 +0.1 638,788 + EX28DRAFT_0644 0.50 +0.1 638,788 + EX28DRAFT_0644 0.50 -0.8 638,788 + EX28DRAFT_0644 0.50 +0.6 638,788 + EX28DRAFT_0644 0.50 -0.1 638,788 + EX28DRAFT_0644 0.50 +0.2 638,788 + EX28DRAFT_0644 0.50 -0.3 638,788 + EX28DRAFT_0644 0.50 -1.5 638,789 - EX28DRAFT_0644 0.50 -0.2 638,813 - EX28DRAFT_0644 0.54 -0.8 638,885 + EX28DRAFT_0644 0.64 +0.3 638,885 + EX28DRAFT_0644 0.64 -0.7 638,947 + EX28DRAFT_0644 0.74 +0.3 638,947 + EX28DRAFT_0644 0.74 -0.1 638,947 + EX28DRAFT_0644 0.74 +0.5 638,947 + EX28DRAFT_0644 0.74 -0.1 638,948 - EX28DRAFT_0644 0.74 -0.2 638,948 - EX28DRAFT_0644 0.74 -0.3 638,948 - EX28DRAFT_0644 0.74 -0.0 638,990 + EX28DRAFT_0644 0.80 +0.5 638,992 + EX28DRAFT_0644 0.80 -0.0 639,103 - -0.2 639,103 - -1.2 639,124 + +0.2 639,155 - +0.0 639,159 - -0.3 639,208 - -0.5 639,480 - EX28DRAFT_0645 0.27 -1.9 639,570 + EX28DRAFT_0645 0.34 -0.6 639,750 + EX28DRAFT_0645 0.49 +0.4 639,763 - EX28DRAFT_0645 0.50 -0.1 639,862 - EX28DRAFT_0645 0.58 +0.4 639,862 - EX28DRAFT_0645 0.58 -0.5 640,076 + EX28DRAFT_0645 0.76 -1.1 640,094 + EX28DRAFT_0645 0.77 -1.4 640,114 - EX28DRAFT_0645 0.79 +0.1 640,149 - EX28DRAFT_0645 0.82 -0.4 640,149 - EX28DRAFT_0645 0.82 +0.3 640,197 - EX28DRAFT_0645 0.86 +0.2 640,223 + EX28DRAFT_0645 0.88 +0.1 640,470 - -0.5 640,514 + -1.0 640,515 - +0.4 640,830 + EX28DRAFT_0646 0.68 +0.3 640,831 - EX28DRAFT_0646 0.68 +2.7 640,937 - +0.1 640,976 + -0.1 641,007 + -0.5 641,290 - EX28DRAFT_0647 0.63 -0.7
Or see this region's nucleotide sequence