Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0592 and EX28DRAFT_0593 are separated by 61 nucleotides EX28DRAFT_0593 and EX28DRAFT_0594 overlap by 20 nucleotides EX28DRAFT_0594 and EX28DRAFT_0595 overlap by 29 nucleotides
EX28DRAFT_0592: EX28DRAFT_0592 - Predicted HD superfamily hydrolase, at 595,503 to 596,204
_0592
EX28DRAFT_0593: EX28DRAFT_0593 - DNA-methyltransferase (dcm), at 596,266 to 597,681
_0593
EX28DRAFT_0594: EX28DRAFT_0594 - T/G mismatch-specific endonuclease (EC 3.1.-.-), at 597,662 to 598,153
_0594
EX28DRAFT_0595: EX28DRAFT_0595 - Predicted permease, DMT superfamily, at 598,125 to 599,039
_0595
Position (kb) 596
597
598 Strain fitness (log2 ratio) -2
-1
0
1 at 595.289 kb on - strand at 595.580 kb on + strand, within EX28DRAFT_0592 at 595.668 kb on + strand, within EX28DRAFT_0592 at 595.668 kb on + strand, within EX28DRAFT_0592 at 595.791 kb on - strand, within EX28DRAFT_0592 at 595.791 kb on - strand, within EX28DRAFT_0592 at 595.854 kb on - strand, within EX28DRAFT_0592 at 596.052 kb on - strand, within EX28DRAFT_0592 at 596.052 kb on - strand, within EX28DRAFT_0592 at 596.262 kb on - strand at 596.344 kb on + strand at 596.344 kb on + strand at 596.344 kb on + strand at 596.344 kb on + strand at 596.344 kb on + strand at 596.344 kb on + strand at 596.345 kb on - strand at 596.345 kb on - strand at 596.345 kb on - strand at 596.352 kb on + strand at 596.353 kb on - strand at 596.515 kb on + strand, within EX28DRAFT_0593 at 596.515 kb on + strand, within EX28DRAFT_0593 at 596.633 kb on - strand, within EX28DRAFT_0593 at 596.633 kb on - strand, within EX28DRAFT_0593 at 596.633 kb on - strand, within EX28DRAFT_0593 at 596.648 kb on - strand, within EX28DRAFT_0593 at 597.096 kb on + strand, within EX28DRAFT_0593 at 597.253 kb on + strand, within EX28DRAFT_0593 at 597.254 kb on - strand, within EX28DRAFT_0593 at 597.315 kb on - strand, within EX28DRAFT_0593 at 597.361 kb on + strand, within EX28DRAFT_0593 at 597.364 kb on + strand, within EX28DRAFT_0593 at 597.364 kb on + strand, within EX28DRAFT_0593 at 597.365 kb on - strand, within EX28DRAFT_0593 at 597.366 kb on + strand, within EX28DRAFT_0593 at 597.700 kb on + strand at 597.701 kb on - strand at 597.889 kb on + strand, within EX28DRAFT_0594 at 598.127 kb on - strand at 598.173 kb on + strand at 598.178 kb on - strand at 598.301 kb on - strand, within EX28DRAFT_0595 at 598.349 kb on + strand, within EX28DRAFT_0595 at 598.349 kb on + strand, within EX28DRAFT_0595 at 598.350 kb on - strand, within EX28DRAFT_0595 at 598.350 kb on - strand, within EX28DRAFT_0595 at 598.351 kb on + strand, within EX28DRAFT_0595
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 595,289 - +0.3 595,580 + EX28DRAFT_0592 0.11 -0.2 595,668 + EX28DRAFT_0592 0.24 +0.0 595,668 + EX28DRAFT_0592 0.24 +1.1 595,791 - EX28DRAFT_0592 0.41 -0.5 595,791 - EX28DRAFT_0592 0.41 -0.6 595,854 - EX28DRAFT_0592 0.50 +0.0 596,052 - EX28DRAFT_0592 0.78 +0.7 596,052 - EX28DRAFT_0592 0.78 -0.1 596,262 - -1.8 596,344 + -1.8 596,344 + -1.8 596,344 + -0.3 596,344 + -1.4 596,344 + -1.0 596,344 + -1.7 596,345 - +0.3 596,345 - -1.4 596,345 - -0.9 596,352 + -1.7 596,353 - -1.2 596,515 + EX28DRAFT_0593 0.18 -1.6 596,515 + EX28DRAFT_0593 0.18 -1.1 596,633 - EX28DRAFT_0593 0.26 -0.6 596,633 - EX28DRAFT_0593 0.26 -0.3 596,633 - EX28DRAFT_0593 0.26 -1.8 596,648 - EX28DRAFT_0593 0.27 -0.9 597,096 + EX28DRAFT_0593 0.59 -0.9 597,253 + EX28DRAFT_0593 0.70 -0.7 597,254 - EX28DRAFT_0593 0.70 -0.8 597,315 - EX28DRAFT_0593 0.74 -1.5 597,361 + EX28DRAFT_0593 0.77 -1.8 597,364 + EX28DRAFT_0593 0.78 -1.1 597,364 + EX28DRAFT_0593 0.78 -0.7 597,365 - EX28DRAFT_0593 0.78 -1.1 597,366 + EX28DRAFT_0593 0.78 -1.0 597,700 + +0.1 597,701 - +1.7 597,889 + EX28DRAFT_0594 0.46 -0.8 598,127 - -1.5 598,173 + +0.9 598,178 - +0.6 598,301 - EX28DRAFT_0595 0.19 -0.2 598,349 + EX28DRAFT_0595 0.24 -0.2 598,349 + EX28DRAFT_0595 0.24 -1.1 598,350 - EX28DRAFT_0595 0.25 +0.8 598,350 - EX28DRAFT_0595 0.25 +0.3 598,351 + EX28DRAFT_0595 0.25 +0.8
Or see this region's nucleotide sequence