Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0470 and EX28DRAFT_0471 overlap by 27 nucleotides EX28DRAFT_0471 and EX28DRAFT_0472 overlap by 4 nucleotides EX28DRAFT_0472 and EX28DRAFT_0473 overlap by 4 nucleotides
EX28DRAFT_0470: EX28DRAFT_0470 - Transcriptional regulators, at 453,264 to 454,010
_0470
EX28DRAFT_0471: EX28DRAFT_0471 - Sugar kinases, ribokinase family, at 453,984 to 454,937
_0471
EX28DRAFT_0472: EX28DRAFT_0472 - ADP-ribosylglycohydrolase, at 454,934 to 455,938
_0472
EX28DRAFT_0473: EX28DRAFT_0473 - nucleoside transporter, at 455,935 to 457,212
_0473
Position (kb) 454
455
456 Strain fitness (log2 ratio) -2
-1
0
1
2 at 453.969 kb on + strand at 453.970 kb on - strand at 453.986 kb on - strand at 453.988 kb on - strand at 454.008 kb on + strand at 454.008 kb on + strand at 454.501 kb on - strand, within EX28DRAFT_0471 at 454.505 kb on - strand, within EX28DRAFT_0471 at 454.692 kb on - strand, within EX28DRAFT_0471 at 454.692 kb on - strand, within EX28DRAFT_0471 at 454.790 kb on + strand, within EX28DRAFT_0471 at 454.937 kb on + strand at 454.938 kb on - strand at 455.220 kb on + strand, within EX28DRAFT_0472 at 455.284 kb on + strand, within EX28DRAFT_0472 at 455.284 kb on + strand, within EX28DRAFT_0472 at 455.674 kb on + strand, within EX28DRAFT_0472 at 455.675 kb on - strand, within EX28DRAFT_0472 at 455.675 kb on - strand, within EX28DRAFT_0472 at 455.794 kb on + strand, within EX28DRAFT_0472 at 455.795 kb on - strand, within EX28DRAFT_0472 at 455.795 kb on - strand, within EX28DRAFT_0472 at 455.814 kb on - strand, within EX28DRAFT_0472 at 455.940 kb on + strand at 455.940 kb on + strand at 455.940 kb on + strand at 456.024 kb on + strand at 456.025 kb on - strand at 456.114 kb on - strand, within EX28DRAFT_0473 at 456.189 kb on + strand, within EX28DRAFT_0473 at 456.242 kb on + strand, within EX28DRAFT_0473 at 456.243 kb on - strand, within EX28DRAFT_0473 at 456.247 kb on - strand, within EX28DRAFT_0473 at 456.247 kb on - strand, within EX28DRAFT_0473 at 456.248 kb on + strand, within EX28DRAFT_0473 at 456.248 kb on + strand, within EX28DRAFT_0473 at 456.249 kb on - strand, within EX28DRAFT_0473 at 456.260 kb on + strand, within EX28DRAFT_0473 at 456.261 kb on - strand, within EX28DRAFT_0473 at 456.263 kb on + strand, within EX28DRAFT_0473 at 456.264 kb on - strand, within EX28DRAFT_0473 at 456.273 kb on - strand, within EX28DRAFT_0473 at 456.314 kb on + strand, within EX28DRAFT_0473 at 456.389 kb on - strand, within EX28DRAFT_0473 at 456.399 kb on + strand, within EX28DRAFT_0473 at 456.418 kb on - strand, within EX28DRAFT_0473 at 456.439 kb on - strand, within EX28DRAFT_0473 at 456.527 kb on + strand, within EX28DRAFT_0473 at 456.527 kb on + strand, within EX28DRAFT_0473 at 456.527 kb on + strand, within EX28DRAFT_0473 at 456.528 kb on - strand, within EX28DRAFT_0473 at 456.528 kb on - strand, within EX28DRAFT_0473 at 456.528 kb on - strand, within EX28DRAFT_0473 at 456.531 kb on - strand, within EX28DRAFT_0473 at 456.531 kb on - strand, within EX28DRAFT_0473 at 456.663 kb on + strand, within EX28DRAFT_0473 at 456.663 kb on + strand, within EX28DRAFT_0473 at 456.898 kb on - strand, within EX28DRAFT_0473 at 456.899 kb on + strand, within EX28DRAFT_0473 at 456.899 kb on + strand, within EX28DRAFT_0473 at 456.899 kb on + strand, within EX28DRAFT_0473 at 456.899 kb on + strand, within EX28DRAFT_0473 at 456.900 kb on - strand, within EX28DRAFT_0473 at 456.900 kb on - strand, within EX28DRAFT_0473 at 456.900 kb on - strand, within EX28DRAFT_0473 at 456.911 kb on + strand, within EX28DRAFT_0473 at 456.912 kb on - strand, within EX28DRAFT_0473
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 453,969 + -0.0 453,970 - +1.9 453,986 - +0.0 453,988 - -0.2 454,008 + +0.1 454,008 + +0.4 454,501 - EX28DRAFT_0471 0.54 +0.5 454,505 - EX28DRAFT_0471 0.55 +1.4 454,692 - EX28DRAFT_0471 0.74 +0.5 454,692 - EX28DRAFT_0471 0.74 -0.5 454,790 + EX28DRAFT_0471 0.84 -0.1 454,937 + +0.2 454,938 - +0.2 455,220 + EX28DRAFT_0472 0.28 +0.3 455,284 + EX28DRAFT_0472 0.35 -0.1 455,284 + EX28DRAFT_0472 0.35 -0.6 455,674 + EX28DRAFT_0472 0.74 -0.3 455,675 - EX28DRAFT_0472 0.74 +1.4 455,675 - EX28DRAFT_0472 0.74 +0.4 455,794 + EX28DRAFT_0472 0.86 -0.3 455,795 - EX28DRAFT_0472 0.86 +0.5 455,795 - EX28DRAFT_0472 0.86 +1.2 455,814 - EX28DRAFT_0472 0.88 +0.0 455,940 + -0.6 455,940 + -1.4 455,940 + -0.0 456,024 + +0.5 456,025 - +0.3 456,114 - EX28DRAFT_0473 0.14 +0.3 456,189 + EX28DRAFT_0473 0.20 -0.4 456,242 + EX28DRAFT_0473 0.24 -1.4 456,243 - EX28DRAFT_0473 0.24 -0.4 456,247 - EX28DRAFT_0473 0.24 +0.9 456,247 - EX28DRAFT_0473 0.24 +0.4 456,248 + EX28DRAFT_0473 0.24 +0.2 456,248 + EX28DRAFT_0473 0.24 -0.1 456,249 - EX28DRAFT_0473 0.25 -0.5 456,260 + EX28DRAFT_0473 0.25 +0.5 456,261 - EX28DRAFT_0473 0.26 +0.1 456,263 + EX28DRAFT_0473 0.26 +1.4 456,264 - EX28DRAFT_0473 0.26 -0.3 456,273 - EX28DRAFT_0473 0.26 +0.5 456,314 + EX28DRAFT_0473 0.30 +1.1 456,389 - EX28DRAFT_0473 0.36 -0.4 456,399 + EX28DRAFT_0473 0.36 +0.9 456,418 - EX28DRAFT_0473 0.38 +0.4 456,439 - EX28DRAFT_0473 0.39 +0.2 456,527 + EX28DRAFT_0473 0.46 +0.0 456,527 + EX28DRAFT_0473 0.46 -0.8 456,527 + EX28DRAFT_0473 0.46 -0.4 456,528 - EX28DRAFT_0473 0.46 -0.8 456,528 - EX28DRAFT_0473 0.46 -2.0 456,528 - EX28DRAFT_0473 0.46 -0.4 456,531 - EX28DRAFT_0473 0.47 -1.1 456,531 - EX28DRAFT_0473 0.47 -1.7 456,663 + EX28DRAFT_0473 0.57 -1.1 456,663 + EX28DRAFT_0473 0.57 +0.7 456,898 - EX28DRAFT_0473 0.75 +0.3 456,899 + EX28DRAFT_0473 0.75 +0.7 456,899 + EX28DRAFT_0473 0.75 -0.3 456,899 + EX28DRAFT_0473 0.75 +0.1 456,899 + EX28DRAFT_0473 0.75 +1.2 456,900 - EX28DRAFT_0473 0.76 -0.1 456,900 - EX28DRAFT_0473 0.76 +0.7 456,900 - EX28DRAFT_0473 0.76 +0.2 456,911 + EX28DRAFT_0473 0.76 +0.6 456,912 - EX28DRAFT_0473 0.76 +0.2
Or see this region's nucleotide sequence