Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0373 and EX28DRAFT_0374 are separated by 19 nucleotides EX28DRAFT_0374 and EX28DRAFT_0375 are separated by 134 nucleotides EX28DRAFT_0375 and EX28DRAFT_0376 are separated by 52 nucleotides EX28DRAFT_0376 and EX28DRAFT_0377 are separated by 125 nucleotides
EX28DRAFT_0373: EX28DRAFT_0373 - Predicted hydrolase of alkaline phosphatase superfamily, at 344,227 to 345,987
_0373
EX28DRAFT_0374: EX28DRAFT_0374 - Uncharacterized protein conserved in bacteria, at 346,007 to 346,234
_0374
EX28DRAFT_0375: EX28DRAFT_0375 - Nucleoid-associated protein, at 346,369 to 347,376
_0375
EX28DRAFT_0376: EX28DRAFT_0376 - Ribosomal protein L25 (general stress protein Ctc), at 347,429 to 347,713
_0376
EX28DRAFT_0377: EX28DRAFT_0377 - DNA or RNA helicases of superfamily II, at 347,839 to 349,599
_0377
Position (kb) 346
347
348 Strain fitness (log2 ratio) -1
0
1 at 346.118 kb on - strand, within EX28DRAFT_0374 at 346.170 kb on - strand, within EX28DRAFT_0374 at 346.270 kb on - strand at 346.270 kb on - strand at 346.270 kb on - strand at 346.407 kb on + strand at 346.739 kb on + strand, within EX28DRAFT_0375 at 347.048 kb on - strand, within EX28DRAFT_0375 at 347.053 kb on + strand, within EX28DRAFT_0375 at 347.054 kb on - strand, within EX28DRAFT_0375 at 347.305 kb on - strand at 347.953 kb on + strand at 348.110 kb on + strand, within EX28DRAFT_0377 at 348.111 kb on - strand, within EX28DRAFT_0377 at 348.111 kb on - strand, within EX28DRAFT_0377 at 348.213 kb on + strand, within EX28DRAFT_0377
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 346,118 - EX28DRAFT_0374 0.49 -0.7 346,170 - EX28DRAFT_0374 0.71 -1.1 346,270 - -0.7 346,270 - +0.9 346,270 - +1.0 346,407 + +0.3 346,739 + EX28DRAFT_0375 0.37 +0.4 347,048 - EX28DRAFT_0375 0.67 +0.6 347,053 + EX28DRAFT_0375 0.68 +0.5 347,054 - EX28DRAFT_0375 0.68 -0.4 347,305 - -0.0 347,953 + +0.1 348,110 + EX28DRAFT_0377 0.15 +0.3 348,111 - EX28DRAFT_0377 0.15 -0.2 348,111 - EX28DRAFT_0377 0.15 -0.1 348,213 + EX28DRAFT_0377 0.21 +0.4
Or see this region's nucleotide sequence