Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0235 and EX28DRAFT_0236 are separated by 0 nucleotides EX28DRAFT_0236 and EX28DRAFT_0237 are separated by 205 nucleotides
EX28DRAFT_0235: EX28DRAFT_0235 - indolepyruvate decarboxylase, Erwinia family, at 186,188 to 187,846
_0235
EX28DRAFT_0236: EX28DRAFT_0236 - Chloride channel protein EriC, at 187,847 to 189,082
_0236
EX28DRAFT_0237: EX28DRAFT_0237 - glucokinase, proteobacterial type, at 189,288 to 190,253
_0237
Position (kb) 187
188
189
190 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 186.968 kb on + strand, within EX28DRAFT_0235 at 187.512 kb on + strand, within EX28DRAFT_0235 at 187.580 kb on + strand, within EX28DRAFT_0235 at 187.580 kb on + strand, within EX28DRAFT_0235 at 187.619 kb on + strand, within EX28DRAFT_0235 at 187.621 kb on + strand, within EX28DRAFT_0235 at 187.621 kb on + strand, within EX28DRAFT_0235 at 187.622 kb on - strand, within EX28DRAFT_0235 at 187.622 kb on - strand, within EX28DRAFT_0235 at 187.817 kb on - strand at 187.849 kb on - strand at 188.018 kb on - strand, within EX28DRAFT_0236 at 188.161 kb on + strand, within EX28DRAFT_0236 at 188.161 kb on + strand, within EX28DRAFT_0236 at 188.182 kb on - strand, within EX28DRAFT_0236 at 188.195 kb on - strand, within EX28DRAFT_0236 at 188.306 kb on + strand, within EX28DRAFT_0236 at 188.306 kb on + strand, within EX28DRAFT_0236 at 188.306 kb on + strand, within EX28DRAFT_0236 at 188.307 kb on - strand, within EX28DRAFT_0236 at 188.327 kb on - strand, within EX28DRAFT_0236 at 188.327 kb on - strand, within EX28DRAFT_0236 at 188.416 kb on + strand, within EX28DRAFT_0236 at 188.702 kb on - strand, within EX28DRAFT_0236 at 188.960 kb on + strand at 189.029 kb on - strand at 189.033 kb on - strand at 189.096 kb on + strand at 189.106 kb on + strand at 189.109 kb on + strand at 189.109 kb on + strand at 189.109 kb on + strand at 189.110 kb on - strand at 189.110 kb on - strand at 189.110 kb on - strand at 189.115 kb on - strand at 189.115 kb on - strand at 189.127 kb on - strand at 189.141 kb on + strand at 189.211 kb on - strand at 189.259 kb on + strand at 189.259 kb on + strand at 189.259 kb on + strand at 189.260 kb on - strand at 189.260 kb on - strand at 189.281 kb on + strand at 189.297 kb on + strand at 189.298 kb on - strand at 189.353 kb on + strand at 189.519 kb on - strand, within EX28DRAFT_0237 at 189.809 kb on - strand, within EX28DRAFT_0237 at 189.809 kb on - strand, within EX28DRAFT_0237 at 189.817 kb on + strand, within EX28DRAFT_0237 at 190.062 kb on + strand, within EX28DRAFT_0237 at 190.063 kb on - strand, within EX28DRAFT_0237 at 190.065 kb on - strand, within EX28DRAFT_0237
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 186,968 + EX28DRAFT_0235 0.47 -0.0 187,512 + EX28DRAFT_0235 0.80 -5.1 187,580 + EX28DRAFT_0235 0.84 +0.1 187,580 + EX28DRAFT_0235 0.84 -0.0 187,619 + EX28DRAFT_0235 0.86 +1.8 187,621 + EX28DRAFT_0235 0.86 -0.1 187,621 + EX28DRAFT_0235 0.86 +1.2 187,622 - EX28DRAFT_0235 0.86 +1.1 187,622 - EX28DRAFT_0235 0.86 +1.3 187,817 - -0.5 187,849 - +0.3 188,018 - EX28DRAFT_0236 0.14 +0.9 188,161 + EX28DRAFT_0236 0.25 -0.6 188,161 + EX28DRAFT_0236 0.25 -0.2 188,182 - EX28DRAFT_0236 0.27 +0.2 188,195 - EX28DRAFT_0236 0.28 +0.3 188,306 + EX28DRAFT_0236 0.37 +0.7 188,306 + EX28DRAFT_0236 0.37 +0.8 188,306 + EX28DRAFT_0236 0.37 +0.6 188,307 - EX28DRAFT_0236 0.37 -0.1 188,327 - EX28DRAFT_0236 0.39 +1.0 188,327 - EX28DRAFT_0236 0.39 +1.0 188,416 + EX28DRAFT_0236 0.46 +0.4 188,702 - EX28DRAFT_0236 0.69 -0.0 188,960 + +1.0 189,029 - +0.5 189,033 - +0.6 189,096 + +0.4 189,106 + -0.2 189,109 + -1.7 189,109 + -3.9 189,109 + +0.0 189,110 - +0.0 189,110 - -1.0 189,110 - +0.6 189,115 - +0.5 189,115 - +0.2 189,127 - +0.3 189,141 + +2.0 189,211 - -0.9 189,259 + +1.0 189,259 + -0.2 189,259 + +0.4 189,260 - +0.3 189,260 - -0.3 189,281 + +1.0 189,297 + +0.5 189,298 - +1.6 189,353 + -3.3 189,519 - EX28DRAFT_0237 0.24 -0.2 189,809 - EX28DRAFT_0237 0.54 -0.0 189,809 - EX28DRAFT_0237 0.54 +0.4 189,817 + EX28DRAFT_0237 0.55 -1.6 190,062 + EX28DRAFT_0237 0.80 +0.3 190,063 - EX28DRAFT_0237 0.80 +1.0 190,065 - EX28DRAFT_0237 0.80 +0.5
Or see this region's nucleotide sequence