Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0197 and EX28DRAFT_0198 are separated by 289 nucleotides EX28DRAFT_0198 and EX28DRAFT_0199 are separated by 56 nucleotides EX28DRAFT_0199 and EX28DRAFT_0200 overlap by 1 nucleotides
EX28DRAFT_0197: EX28DRAFT_0197 - transaldolase, at 151,318 to 152,268
_0197
EX28DRAFT_0198: EX28DRAFT_0198 - Malic enzyme, at 152,558 to 154,837
_0198
EX28DRAFT_0199: EX28DRAFT_0199 - coproporphyrinogen oxidase (EC 1.3.3.3), at 154,894 to 155,793
_0199
EX28DRAFT_0200: EX28DRAFT_0200 - N-acetylmuramoyl-L-alanine amidase, at 155,793 to 156,668
_0200
Position (kb) 152
153
154
155 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 151.644 kb on - strand, within EX28DRAFT_0197 at 151.644 kb on - strand, within EX28DRAFT_0197 at 151.648 kb on - strand, within EX28DRAFT_0197 at 151.688 kb on + strand, within EX28DRAFT_0197 at 151.688 kb on + strand, within EX28DRAFT_0197 at 151.689 kb on - strand, within EX28DRAFT_0197 at 151.689 kb on - strand, within EX28DRAFT_0197 at 151.724 kb on + strand, within EX28DRAFT_0197 at 151.724 kb on + strand, within EX28DRAFT_0197 at 151.725 kb on - strand, within EX28DRAFT_0197 at 151.725 kb on - strand, within EX28DRAFT_0197 at 151.897 kb on - strand, within EX28DRAFT_0197 at 151.897 kb on - strand, within EX28DRAFT_0197 at 151.897 kb on - strand, within EX28DRAFT_0197 at 151.945 kb on - strand, within EX28DRAFT_0197 at 152.035 kb on - strand, within EX28DRAFT_0197 at 152.099 kb on + strand, within EX28DRAFT_0197 at 152.158 kb on + strand, within EX28DRAFT_0197 at 152.268 kb on + strand at 152.269 kb on - strand at 152.276 kb on + strand at 152.277 kb on - strand at 152.404 kb on - strand at 152.406 kb on - strand at 152.484 kb on + strand at 152.484 kb on + strand at 152.519 kb on - strand at 152.519 kb on - strand at 152.554 kb on + strand at 152.555 kb on - strand at 152.736 kb on - strand at 152.736 kb on - strand at 152.845 kb on - strand, within EX28DRAFT_0198 at 152.990 kb on + strand, within EX28DRAFT_0198 at 152.990 kb on + strand, within EX28DRAFT_0198 at 152.991 kb on - strand, within EX28DRAFT_0198 at 152.991 kb on - strand, within EX28DRAFT_0198 at 153.230 kb on - strand, within EX28DRAFT_0198 at 153.233 kb on + strand, within EX28DRAFT_0198 at 153.233 kb on + strand, within EX28DRAFT_0198 at 153.234 kb on - strand, within EX28DRAFT_0198 at 153.234 kb on - strand, within EX28DRAFT_0198 at 153.360 kb on + strand, within EX28DRAFT_0198 at 153.361 kb on - strand, within EX28DRAFT_0198 at 153.689 kb on + strand, within EX28DRAFT_0198 at 153.689 kb on + strand, within EX28DRAFT_0198 at 153.690 kb on - strand, within EX28DRAFT_0198 at 153.690 kb on - strand, within EX28DRAFT_0198 at 153.803 kb on + strand, within EX28DRAFT_0198 at 153.951 kb on + strand, within EX28DRAFT_0198 at 154.097 kb on + strand, within EX28DRAFT_0198 at 154.098 kb on - strand, within EX28DRAFT_0198 at 154.100 kb on + strand, within EX28DRAFT_0198 at 154.101 kb on - strand, within EX28DRAFT_0198 at 154.352 kb on + strand, within EX28DRAFT_0198 at 154.352 kb on + strand, within EX28DRAFT_0198 at 154.353 kb on - strand, within EX28DRAFT_0198 at 154.353 kb on - strand, within EX28DRAFT_0198 at 154.353 kb on - strand, within EX28DRAFT_0198 at 154.477 kb on + strand, within EX28DRAFT_0198 at 154.478 kb on - strand, within EX28DRAFT_0198 at 154.603 kb on + strand, within EX28DRAFT_0198 at 154.636 kb on + strand at 154.645 kb on + strand at 154.676 kb on + strand at 154.716 kb on + strand at 154.784 kb on - strand at 154.836 kb on - strand at 154.895 kb on + strand at 154.896 kb on - strand at 154.896 kb on - strand at 154.896 kb on - strand at 154.967 kb on + strand at 155.169 kb on - strand, within EX28DRAFT_0199 at 155.391 kb on - strand, within EX28DRAFT_0199
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 151,644 - EX28DRAFT_0197 0.34 -0.3 151,644 - EX28DRAFT_0197 0.34 -0.2 151,648 - EX28DRAFT_0197 0.35 +1.6 151,688 + EX28DRAFT_0197 0.39 -0.4 151,688 + EX28DRAFT_0197 0.39 +0.2 151,689 - EX28DRAFT_0197 0.39 -1.0 151,689 - EX28DRAFT_0197 0.39 +0.1 151,724 + EX28DRAFT_0197 0.43 +0.0 151,724 + EX28DRAFT_0197 0.43 +0.4 151,725 - EX28DRAFT_0197 0.43 -0.1 151,725 - EX28DRAFT_0197 0.43 +0.7 151,897 - EX28DRAFT_0197 0.61 -1.0 151,897 - EX28DRAFT_0197 0.61 +1.6 151,897 - EX28DRAFT_0197 0.61 -0.3 151,945 - EX28DRAFT_0197 0.66 +0.1 152,035 - EX28DRAFT_0197 0.75 -0.1 152,099 + EX28DRAFT_0197 0.82 +0.2 152,158 + EX28DRAFT_0197 0.88 +0.3 152,268 + -1.0 152,269 - -0.2 152,276 + -0.3 152,277 - +1.0 152,404 - +0.2 152,406 - +0.2 152,484 + -0.1 152,484 + +0.6 152,519 - -0.6 152,519 - -0.5 152,554 + -3.3 152,555 - +0.1 152,736 - -1.0 152,736 - -0.4 152,845 - EX28DRAFT_0198 0.13 +0.3 152,990 + EX28DRAFT_0198 0.19 -0.4 152,990 + EX28DRAFT_0198 0.19 -0.2 152,991 - EX28DRAFT_0198 0.19 -0.4 152,991 - EX28DRAFT_0198 0.19 +0.2 153,230 - EX28DRAFT_0198 0.29 +0.8 153,233 + EX28DRAFT_0198 0.30 +0.1 153,233 + EX28DRAFT_0198 0.30 -0.8 153,234 - EX28DRAFT_0198 0.30 +0.1 153,234 - EX28DRAFT_0198 0.30 -0.3 153,360 + EX28DRAFT_0198 0.35 -1.9 153,361 - EX28DRAFT_0198 0.35 -0.3 153,689 + EX28DRAFT_0198 0.50 +0.2 153,689 + EX28DRAFT_0198 0.50 +0.3 153,690 - EX28DRAFT_0198 0.50 +0.4 153,690 - EX28DRAFT_0198 0.50 -0.6 153,803 + EX28DRAFT_0198 0.55 -0.5 153,951 + EX28DRAFT_0198 0.61 -0.1 154,097 + EX28DRAFT_0198 0.68 -0.1 154,098 - EX28DRAFT_0198 0.68 -0.1 154,100 + EX28DRAFT_0198 0.68 +0.7 154,101 - EX28DRAFT_0198 0.68 -0.0 154,352 + EX28DRAFT_0198 0.79 -0.3 154,352 + EX28DRAFT_0198 0.79 -0.4 154,353 - EX28DRAFT_0198 0.79 +0.5 154,353 - EX28DRAFT_0198 0.79 -0.1 154,353 - EX28DRAFT_0198 0.79 +0.2 154,477 + EX28DRAFT_0198 0.84 -0.6 154,478 - EX28DRAFT_0198 0.84 -1.9 154,603 + EX28DRAFT_0198 0.90 +0.5 154,636 + -0.0 154,645 + -0.1 154,676 + +0.7 154,716 + +1.3 154,784 - +0.3 154,836 - -0.6 154,895 + +0.3 154,896 - -0.4 154,896 - -1.2 154,896 - +0.7 154,967 + -0.3 155,169 - EX28DRAFT_0199 0.31 -0.4 155,391 - EX28DRAFT_0199 0.55 +0.8
Or see this region's nucleotide sequence