Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_0058

Experiment: M9 with sucrose; no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_0058 and EX28DRAFT_0059 are separated by 73 nucleotidesEX28DRAFT_0059 and EX28DRAFT_0060 are separated by 208 nucleotides EX28DRAFT_0058: EX28DRAFT_0058 - 23S, at 1 to 123 _0058 EX28DRAFT_0059: EX28DRAFT_0059 - 5S, at 197 to 312 _0059 EX28DRAFT_0060: EX28DRAFT_0060 - metabolite-proton symporter, at 521 to 1,816 _0060 Position (kb) 0 1Strain fitness (log2 ratio) -1 0 1at 0.101 kb on + strand, within EX28DRAFT_0058at 0.124 kb on + strandat 0.124 kb on + strandat 0.319 kb on + strandat 0.535 kb on + strandat 0.632 kb on + strandat 0.632 kb on + strandat 0.633 kb on - strandat 0.657 kb on - strand, within EX28DRAFT_0060at 0.657 kb on - strand, within EX28DRAFT_0060at 0.705 kb on + strand, within EX28DRAFT_0060at 0.802 kb on + strand, within EX28DRAFT_0060at 0.803 kb on - strand, within EX28DRAFT_0060at 0.803 kb on - strand, within EX28DRAFT_0060at 0.878 kb on - strand, within EX28DRAFT_0060at 0.895 kb on - strand, within EX28DRAFT_0060at 0.897 kb on + strand, within EX28DRAFT_0060at 0.897 kb on + strand, within EX28DRAFT_0060at 0.897 kb on + strand, within EX28DRAFT_0060at 0.901 kb on - strand, within EX28DRAFT_0060at 0.913 kb on - strand, within EX28DRAFT_0060at 0.959 kb on + strand, within EX28DRAFT_0060at 0.959 kb on + strand, within EX28DRAFT_0060at 0.988 kb on + strand, within EX28DRAFT_0060at 1.014 kb on - strand, within EX28DRAFT_0060at 1.014 kb on - strand, within EX28DRAFT_0060

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control
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101 + EX28DRAFT_0058 0.81 -0.7
124 + -0.7
124 + +0.5
319 + -0.2
535 + -0.2
632 + -0.8
632 + +0.2
633 - +0.8
657 - EX28DRAFT_0060 0.10 +0.1
657 - EX28DRAFT_0060 0.10 +0.3
705 + EX28DRAFT_0060 0.14 -0.0
802 + EX28DRAFT_0060 0.22 -0.0
803 - EX28DRAFT_0060 0.22 +0.2
803 - EX28DRAFT_0060 0.22 +0.8
878 - EX28DRAFT_0060 0.28 -0.4
895 - EX28DRAFT_0060 0.29 +0.0
897 + EX28DRAFT_0060 0.29 +0.1
897 + EX28DRAFT_0060 0.29 -0.8
897 + EX28DRAFT_0060 0.29 -0.0
901 - EX28DRAFT_0060 0.29 +0.2
913 - EX28DRAFT_0060 0.30 -0.2
959 + EX28DRAFT_0060 0.34 +0.9
959 + EX28DRAFT_0060 0.34 +0.4
988 + EX28DRAFT_0060 0.36 -0.2
1,014 - EX28DRAFT_0060 0.38 -0.3
1,014 - EX28DRAFT_0060 0.38 +0.2

Or see this region's nucleotide sequence