Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS11310

Experiment: Gelatin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gelatin (C)
2,193,625	-		ABIE40_RS11305	0.10	-0.3
2,193,821	+		ABIE40_RS11305	0.32	+0.2
2,193,821	+		ABIE40_RS11305	0.32	+1.6
2,193,821	+		ABIE40_RS11305	0.32	+0.8
2,193,821	+		ABIE40_RS11305	0.32	-1.5
2,193,821	+		ABIE40_RS11305	0.32	+0.0
2,193,821	+		ABIE40_RS11305	0.32	+0.6
2,193,821	+		ABIE40_RS11305	0.32	-0.8
2,193,821	+		ABIE40_RS11305	0.32	-0.3
2,193,821	+		ABIE40_RS11305	0.32	-0.5
2,193,822	-		ABIE40_RS11305	0.32	+0.5
2,193,822	-		ABIE40_RS11305	0.32	+0.4
2,193,825	+		ABIE40_RS11305	0.32	+0.6
2,193,825	+		ABIE40_RS11305	0.32	-0.4
2,193,825	+		ABIE40_RS11305	0.32	+0.6
2,193,825	+		ABIE40_RS11305	0.32	+0.5
2,193,825	+		ABIE40_RS11305	0.32	+0.5
2,193,825	+		ABIE40_RS11305	0.32	-0.6
2,193,826	-		ABIE40_RS11305	0.32	+0.5
2,193,826	-		ABIE40_RS11305	0.32	-0.3
2,193,826	-		ABIE40_RS11305	0.32	+0.1
2,193,826	-		ABIE40_RS11305	0.32	-0.8
2,193,826	-		ABIE40_RS11305	0.32	-0.5
2,193,827	+		ABIE40_RS11305	0.33	-1.1
2,193,827	+		ABIE40_RS11305	0.33	-0.5
2,193,827	+		ABIE40_RS11305	0.33	+0.0
2,193,827	+		ABIE40_RS11305	0.33	+0.0
2,193,827	+		ABIE40_RS11305	0.33	+1.3
2,193,828	-		ABIE40_RS11305	0.33	+0.7
2,193,828	-		ABIE40_RS11305	0.33	+1.3
2,193,828	-		ABIE40_RS11305	0.33	-0.8
2,193,828	-		ABIE40_RS11305	0.33	+0.4
2,194,269	+		ABIE40_RS11305	0.81	+1.0
2,194,269	+		ABIE40_RS11305	0.81	+1.8
2,194,269	+		ABIE40_RS11305	0.81	+1.8
2,194,270	-		ABIE40_RS11305	0.81	-0.6
2,194,270	-		ABIE40_RS11305	0.81	+0.2
2,194,270	-		ABIE40_RS11305	0.81	+2.2
2,194,271	+		ABIE40_RS11305	0.81	-1.3
2,194,272	-		ABIE40_RS11305	0.81	-0.0
2,194,272	-		ABIE40_RS11305	0.81	-0.5
2,194,272	-		ABIE40_RS11305	0.81	+1.0
2,194,272	-		ABIE40_RS11305	0.81	+0.8
2,194,421	+				+0.5
2,194,421	+				+0.3
2,194,421	+				+0.3
2,194,421	+				-0.8
2,194,422	-				-0.3
2,194,422	-				+1.5
2,194,422	-				+0.9
2,194,422	-				+0.4
2,194,430	+				-0.3
2,194,431	-				-1.4
2,194,510	+				-0.7
2,194,511	-				-0.2
2,194,511	-				+0.2
2,194,511	-				-2.8
2,194,511	-				-0.3
2,194,527	-				-0.4
2,194,565	+				+0.3
2,194,565	+				-1.8
2,194,565	+				+0.6
2,194,566	-				-0.3
2,194,566	-				-1.8
2,194,567	+				+0.6
2,194,567	+				-0.7
2,194,567	+				-0.8
2,194,567	+				-0.1
2,194,568	-				-0.1
2,194,568	-				+0.2
2,194,573	+				+0.6
2,194,640	+		ABIE40_RS11310	0.18	+0.8
2,194,640	+		ABIE40_RS11310	0.18	+1.4
2,194,640	+		ABIE40_RS11310	0.18	-0.6
2,194,640	+		ABIE40_RS11310	0.18	+1.0
2,194,641	-		ABIE40_RS11310	0.18	+0.8
2,194,641	-		ABIE40_RS11310	0.18	-1.7
2,194,641	-		ABIE40_RS11310	0.18	+0.2
2,194,641	-		ABIE40_RS11310	0.18	-1.1
2,194,641	-		ABIE40_RS11310	0.18	+1.6
2,194,641	-		ABIE40_RS11310	0.18	-0.3
2,194,690	+		ABIE40_RS11310	0.24	+0.5
2,194,690	+		ABIE40_RS11310	0.24	-0.7
2,194,690	+		ABIE40_RS11310	0.24	-0.8
2,194,732	+		ABIE40_RS11310	0.30	+0.1
2,194,732	+		ABIE40_RS11310	0.30	+1.4
2,194,732	+		ABIE40_RS11310	0.30	+0.6
2,194,733	-		ABIE40_RS11310	0.30	+1.8
2,194,733	-		ABIE40_RS11310	0.30	+0.6
2,194,733	-		ABIE40_RS11310	0.30	-0.5
2,194,733	-		ABIE40_RS11310	0.30	-0.5
2,194,733	-		ABIE40_RS11310	0.30	+1.0
2,194,733	-		ABIE40_RS11310	0.30	-0.5
2,194,735	+		ABIE40_RS11310	0.30	-0.3
2,194,735	+		ABIE40_RS11310	0.30	-0.7
2,194,735	+		ABIE40_RS11310	0.30	+0.1
2,194,735	+		ABIE40_RS11310	0.30	-0.7
2,194,735	+		ABIE40_RS11310	0.30	-0.6
2,194,735	+		ABIE40_RS11310	0.30	-0.7
2,194,735	+		ABIE40_RS11310	0.30	+1.8
2,194,735	+		ABIE40_RS11310	0.30	+0.2
2,194,735	+		ABIE40_RS11310	0.30	-0.6
2,194,736	-		ABIE40_RS11310	0.30	-2.7
2,194,736	-		ABIE40_RS11310	0.30	-0.0
2,194,736	-		ABIE40_RS11310	0.30	-0.5
2,194,736	-		ABIE40_RS11310	0.30	-1.6
2,194,736	-		ABIE40_RS11310	0.30	-0.2
2,194,736	-		ABIE40_RS11310	0.30	-0.6
2,194,736	-		ABIE40_RS11310	0.30	-0.6
2,194,736	-		ABIE40_RS11310	0.30	-0.2
2,194,736	-		ABIE40_RS11310	0.30	+0.2
2,194,736	-		ABIE40_RS11310	0.30	+0.3
2,194,864	+		ABIE40_RS11310	0.48	-0.6
2,194,864	+		ABIE40_RS11310	0.48	-0.2
2,194,864	+		ABIE40_RS11310	0.48	+0.2
2,194,865	-		ABIE40_RS11310	0.48	-0.1
2,194,990	+		ABIE40_RS11310	0.64	+1.1
2,194,990	+		ABIE40_RS11310	0.64	-0.1
2,194,990	+		ABIE40_RS11310	0.64	-0.4
2,194,990	+		ABIE40_RS11310	0.64	+0.9
2,194,991	-		ABIE40_RS11310	0.65	+0.8
2,194,991	-		ABIE40_RS11310	0.65	-0.2
2,194,991	-		ABIE40_RS11310	0.65	+0.9
2,194,991	-		ABIE40_RS11310	0.65	-0.0
2,194,991	-		ABIE40_RS11310	0.65	+0.1
2,194,991	-		ABIE40_RS11310	0.65	-0.7
2,195,017	+		ABIE40_RS11310	0.68	-1.9
2,195,017	+		ABIE40_RS11310	0.68	-0.2
2,195,017	+		ABIE40_RS11310	0.68	-2.5
2,195,017	+		ABIE40_RS11310	0.68	+0.4
2,195,017	+		ABIE40_RS11310	0.68	-0.3
2,195,017	+		ABIE40_RS11310	0.68	-1.2
2,195,017	+		ABIE40_RS11310	0.68	+0.1
2,195,017	+		ABIE40_RS11310	0.68	+0.5
2,195,017	+		ABIE40_RS11310	0.68	-0.5
2,195,018	-		ABIE40_RS11310	0.68	+0.2
2,195,018	-		ABIE40_RS11310	0.68	-0.1
2,195,018	-		ABIE40_RS11310	0.68	-0.1
2,195,018	-		ABIE40_RS11310	0.68	-1.0
2,195,018	-		ABIE40_RS11310	0.68	+1.4
2,195,018	-		ABIE40_RS11310	0.68	+0.7
2,195,018	-		ABIE40_RS11310	0.68	-1.6
2,195,018	-		ABIE40_RS11310	0.68	-2.3
2,195,018	-		ABIE40_RS11310	0.68	+0.6
2,195,019	-		ABIE40_RS11310	0.68	+0.1
2,195,153	-		ABIE40_RS11310	0.86	-1.2
2,195,153	-		ABIE40_RS11310	0.86	+0.6
2,195,153	-		ABIE40_RS11310	0.86	-1.8
2,195,202	+				+0.2
2,195,202	+				-0.6
2,195,203	-				-0.3
2,195,203	-				+2.8
2,195,244	+				-0.3
2,195,276	+				+0.2
2,195,276	+				-1.8
2,195,277	-				+0.5
2,195,326	-				-1.0
2,195,437	+		ABIE40_RS11315	0.17	-0.1
2,195,437	+		ABIE40_RS11315	0.17	-0.5
2,195,438	-		ABIE40_RS11315	0.17	+0.0
2,195,438	-		ABIE40_RS11315	0.17	-0.1
2,195,438	-		ABIE40_RS11315	0.17	+0.0
2,195,438	-		ABIE40_RS11315	0.17	+0.2
2,195,439	+		ABIE40_RS11315	0.17	+1.0
2,195,439	+		ABIE40_RS11315	0.17	-1.1
2,195,440	-		ABIE40_RS11315	0.17	+0.2
2,195,440	-		ABIE40_RS11315	0.17	+0.2
2,195,440	-		ABIE40_RS11315	0.17	-1.1
2,195,484	+		ABIE40_RS11315	0.21	+0.0
2,195,484	+		ABIE40_RS11315	0.21	-0.4
2,195,484	+		ABIE40_RS11315	0.21	-0.6
2,195,549	-		ABIE40_RS11315	0.27	+0.0
2,195,637	+		ABIE40_RS11315	0.35	-1.0
2,195,638	-		ABIE40_RS11315	0.35	-0.4
2,195,811	+		ABIE40_RS11315	0.50	+0.2
2,195,811	+		ABIE40_RS11315	0.50	+0.9
2,195,811	+		ABIE40_RS11315	0.50	+0.2
2,195,811	+		ABIE40_RS11315	0.50	+0.3
2,195,812	-		ABIE40_RS11315	0.50	-0.8
2,195,812	-		ABIE40_RS11315	0.50	-1.2
2,195,812	-		ABIE40_RS11315	0.50	-1.0
2,195,812	-		ABIE40_RS11315	0.50	-1.0
2,195,812	-		ABIE40_RS11315	0.50	+1.0
2,195,812	-		ABIE40_RS11315	0.50	-0.9
2,195,885	-		ABIE40_RS11315	0.57	-0.2
2,195,885	-		ABIE40_RS11315	0.57	+0.4
2,195,931	+		ABIE40_RS11315	0.61	+0.6
2,195,931	+		ABIE40_RS11315	0.61	-1.5
2,195,932	-		ABIE40_RS11315	0.61	-1.9
2,195,932	-		ABIE40_RS11315	0.61	+1.0
2,196,048	+		ABIE40_RS11315	0.72	+0.9
2,196,048	+		ABIE40_RS11315	0.72	-1.7
2,196,048	+		ABIE40_RS11315	0.72	-0.0
2,196,048	+		ABIE40_RS11315	0.72	-0.3
2,196,049	-		ABIE40_RS11315	0.72	+0.9
2,196,049	-		ABIE40_RS11315	0.72	-0.1
2,196,049	-		ABIE40_RS11315	0.72	-0.1
2,196,088	-		ABIE40_RS11315	0.75	-0.8
2,196,088	-		ABIE40_RS11315	0.75	+1.2
2,196,191	-		ABIE40_RS11315	0.85	-1.1
2,196,247	+		ABIE40_RS11315	0.90	-0.3
2,196,248	-		ABIE40_RS11315	0.90	-1.5