Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS28615 and ABID97_RS28620 overlap by 110 nucleotides ABID97_RS28620 and ABID97_RS28625 are separated by 101 nucleotides ABID97_RS28625 and ABID97_RS28630 are separated by 37 nucleotides
ABID97_RS28615: ABID97_RS28615 - CoA transferase, at 642,994 to 643,425
_RS28615
ABID97_RS28620: ABID97_RS28620 - CoA transferase, at 643,316 to 644,203
_RS28620
ABID97_RS28625: ABID97_RS28625 - MaoC family dehydratase N-terminal domain-containing protein, at 644,305 to 645,447
_RS28625
ABID97_RS28630: ABID97_RS28630 - AMP-binding protein, at 645,485 to 647,041
_RS28630
Position (kb) 644
645
646 Strain fitness (log2 ratio) -2
-1
0
1 at 643.521 kb on + strand, within ABID97_RS28620 at 643.522 kb on - strand, within ABID97_RS28620 at 643.651 kb on - strand, within ABID97_RS28620 at 643.809 kb on + strand, within ABID97_RS28620 at 643.809 kb on + strand, within ABID97_RS28620 at 643.998 kb on + strand, within ABID97_RS28620 at 644.712 kb on - strand, within ABID97_RS28625 at 645.021 kb on - strand, within ABID97_RS28625 at 645.021 kb on - strand, within ABID97_RS28625 at 645.081 kb on - strand, within ABID97_RS28625 at 645.305 kb on + strand, within ABID97_RS28625 at 645.335 kb on + strand at 645.837 kb on + strand, within ABID97_RS28630 at 646.060 kb on - strand, within ABID97_RS28630 at 646.155 kb on + strand, within ABID97_RS28630 at 646.399 kb on - strand, within ABID97_RS28630
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 643,521 + ABID97_RS28620 0.23 -1.8 643,522 - ABID97_RS28620 0.23 -0.9 643,651 - ABID97_RS28620 0.38 -0.4 643,809 + ABID97_RS28620 0.56 -0.2 643,809 + ABID97_RS28620 0.56 +0.2 643,998 + ABID97_RS28620 0.77 +0.4 644,712 - ABID97_RS28625 0.36 -0.5 645,021 - ABID97_RS28625 0.63 -0.8 645,021 - ABID97_RS28625 0.63 -1.4 645,081 - ABID97_RS28625 0.68 -0.2 645,305 + ABID97_RS28625 0.87 +0.2 645,335 + -0.2 645,837 + ABID97_RS28630 0.23 +0.1 646,060 - ABID97_RS28630 0.37 -0.5 646,155 + ABID97_RS28630 0.43 +1.1 646,399 - ABID97_RS28630 0.59 +0.3
Or see this region's nucleotide sequence