Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS26135 and ABID97_RS26140 overlap by 14 nucleotides ABID97_RS26140 and ABID97_RS26145 are separated by 110 nucleotides ABID97_RS26145 and ABID97_RS26150 are separated by 16 nucleotides
ABID97_RS26135: ABID97_RS26135 - acetamidase/formamidase family protein, at 152,137 to 153,378
_RS26135
ABID97_RS26140: ABID97_RS26140 - acetamidase/formamidase family protein, at 153,365 to 155,773
_RS26140
ABID97_RS26145: ABID97_RS26145 - RidA family protein, at 155,884 to 156,282
_RS26145
ABID97_RS26150: ABID97_RS26150 - TetR/AcrR family transcriptional regulator, at 156,299 to 156,952
_RS26150
Position (kb) 153
154
155
156 Strain fitness (log2 ratio) -1
0
1
2 at 152.516 kb on - strand, within ABID97_RS26135 at 152.656 kb on + strand, within ABID97_RS26135 at 152.657 kb on - strand, within ABID97_RS26135 at 152.860 kb on + strand, within ABID97_RS26135 at 152.860 kb on + strand, within ABID97_RS26135 at 152.861 kb on - strand, within ABID97_RS26135 at 152.911 kb on + strand, within ABID97_RS26135 at 152.912 kb on - strand, within ABID97_RS26135 at 153.131 kb on - strand, within ABID97_RS26135 at 153.140 kb on - strand, within ABID97_RS26135 at 154.083 kb on - strand, within ABID97_RS26140 at 154.170 kb on + strand, within ABID97_RS26140 at 154.171 kb on - strand, within ABID97_RS26140 at 154.171 kb on - strand, within ABID97_RS26140 at 154.404 kb on + strand, within ABID97_RS26140 at 154.602 kb on + strand, within ABID97_RS26140 at 154.603 kb on - strand, within ABID97_RS26140 at 155.134 kb on - strand, within ABID97_RS26140 at 156.122 kb on - strand, within ABID97_RS26145 at 156.122 kb on - strand, within ABID97_RS26145 at 156.166 kb on + strand, within ABID97_RS26145 at 156.167 kb on - strand, within ABID97_RS26145 at 156.667 kb on - strand, within ABID97_RS26150 at 156.711 kb on + strand, within ABID97_RS26150 at 156.712 kb on - strand, within ABID97_RS26150
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 152,516 - ABID97_RS26135 0.31 -0.3 152,656 + ABID97_RS26135 0.42 -1.5 152,657 - ABID97_RS26135 0.42 -0.6 152,860 + ABID97_RS26135 0.58 +0.3 152,860 + ABID97_RS26135 0.58 +0.2 152,861 - ABID97_RS26135 0.58 +0.9 152,911 + ABID97_RS26135 0.62 -0.0 152,912 - ABID97_RS26135 0.62 +0.1 153,131 - ABID97_RS26135 0.80 +1.4 153,140 - ABID97_RS26135 0.81 +0.1 154,083 - ABID97_RS26140 0.30 +2.1 154,170 + ABID97_RS26140 0.33 +0.1 154,171 - ABID97_RS26140 0.33 -0.1 154,171 - ABID97_RS26140 0.33 +1.1 154,404 + ABID97_RS26140 0.43 +0.6 154,602 + ABID97_RS26140 0.51 +0.6 154,603 - ABID97_RS26140 0.51 +0.3 155,134 - ABID97_RS26140 0.73 +0.4 156,122 - ABID97_RS26145 0.60 -0.1 156,122 - ABID97_RS26145 0.60 +0.6 156,166 + ABID97_RS26145 0.71 -0.2 156,167 - ABID97_RS26145 0.71 -0.6 156,667 - ABID97_RS26150 0.56 -0.9 156,711 + ABID97_RS26150 0.63 -1.2 156,712 - ABID97_RS26150 0.63 -0.5
Or see this region's nucleotide sequence