Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS24925 and ABID97_RS24930 are separated by 1 nucleotides ABID97_RS24930 and ABID97_RS24935 are separated by 0 nucleotides ABID97_RS24935 and ABID97_RS24940 are separated by 12 nucleotides ABID97_RS24940 and ABID97_RS24945 overlap by 4 nucleotides
ABID97_RS24925: ABID97_RS24925 - PhoH family protein, at 5,162,484 to 5,163,440
_RS24925
ABID97_RS24930: ABID97_RS24930 - rRNA maturation RNase YbeY, at 5,163,442 to 5,163,903
_RS24930
ABID97_RS24935: ABID97_RS24935 - class I SAM-dependent methyltransferase, at 5,163,904 to 5,164,527
_RS24935
ABID97_RS24940: ABID97_RS24940 - D-aminoacyl-tRNA deacylase, at 5,164,540 to 5,164,983
_RS24940
ABID97_RS24945: ABID97_RS24945 - cation diffusion facilitator family transporter, at 5,164,980 to 5,165,891
_RS24945
Position (kb) 5163
5164
5165 Strain fitness (log2 ratio) -1
0
1 at 5163.901 kb on + strand at 5163.901 kb on + strand at 5163.902 kb on - strand at 5163.902 kb on - strand at 5163.902 kb on - strand at 5164.225 kb on + strand, within ABID97_RS24935 at 5164.225 kb on + strand, within ABID97_RS24935 at 5164.225 kb on + strand, within ABID97_RS24935 at 5164.226 kb on - strand, within ABID97_RS24935 at 5164.372 kb on + strand, within ABID97_RS24935 at 5164.372 kb on + strand, within ABID97_RS24935 at 5164.661 kb on + strand, within ABID97_RS24940 at 5164.661 kb on + strand, within ABID97_RS24940 at 5164.662 kb on - strand, within ABID97_RS24940 at 5164.662 kb on - strand, within ABID97_RS24940 at 5164.667 kb on + strand, within ABID97_RS24940 at 5164.667 kb on + strand, within ABID97_RS24940 at 5164.667 kb on + strand, within ABID97_RS24940 at 5165.183 kb on + strand, within ABID97_RS24945 at 5165.183 kb on + strand, within ABID97_RS24945 at 5165.184 kb on - strand, within ABID97_RS24945 at 5165.184 kb on - strand, within ABID97_RS24945 at 5165.184 kb on - strand, within ABID97_RS24945
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 5,163,901 + -0.9 5,163,901 + +0.6 5,163,902 - +0.0 5,163,902 - -0.3 5,163,902 - -0.7 5,164,225 + ABID97_RS24935 0.51 -0.4 5,164,225 + ABID97_RS24935 0.51 -0.2 5,164,225 + ABID97_RS24935 0.51 -0.3 5,164,226 - ABID97_RS24935 0.52 -0.0 5,164,372 + ABID97_RS24935 0.75 -0.8 5,164,372 + ABID97_RS24935 0.75 +0.1 5,164,661 + ABID97_RS24940 0.27 +0.1 5,164,661 + ABID97_RS24940 0.27 -0.1 5,164,662 - ABID97_RS24940 0.27 +0.0 5,164,662 - ABID97_RS24940 0.27 -0.1 5,164,667 + ABID97_RS24940 0.29 -0.7 5,164,667 + ABID97_RS24940 0.29 +0.2 5,164,667 + ABID97_RS24940 0.29 -0.1 5,165,183 + ABID97_RS24945 0.22 +0.8 5,165,183 + ABID97_RS24945 0.22 +1.0 5,165,184 - ABID97_RS24945 0.22 +1.5 5,165,184 - ABID97_RS24945 0.22 +1.3 5,165,184 - ABID97_RS24945 0.22 +1.2
Or see this region's nucleotide sequence