Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS22840 and ABID97_RS22845 overlap by 4 nucleotides ABID97_RS22845 and ABID97_RS22850 are separated by 27 nucleotides ABID97_RS22850 and ABID97_RS22855 overlap by 4 nucleotides
ABID97_RS22840: ABID97_RS22840 - isoprenylcysteine carboxylmethyltransferase family protein, at 4,729,786 to 4,730,346
_RS22840
ABID97_RS22845: ABID97_RS22845 - CPBP family intramembrane glutamic endopeptidase, at 4,730,343 to 4,731,137
_RS22845
ABID97_RS22850: ABID97_RS22850 - flavin reductase family protein, at 4,731,165 to 4,731,767
_RS22850
ABID97_RS22855: ABID97_RS22855 - D-aminoacylase, at 4,731,764 to 4,733,251
_RS22855
Position (kb)
4731
4732 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4730.305 kb on + strand at 4730.530 kb on - strand, within ABID97_RS22845 at 4730.544 kb on + strand, within ABID97_RS22845 at 4730.820 kb on + strand, within ABID97_RS22845 at 4730.883 kb on + strand, within ABID97_RS22845 at 4730.884 kb on - strand, within ABID97_RS22845 at 4730.884 kb on - strand, within ABID97_RS22845 at 4731.445 kb on + strand, within ABID97_RS22850 at 4731.446 kb on - strand, within ABID97_RS22850 at 4731.446 kb on - strand, within ABID97_RS22850 at 4731.724 kb on + strand at 4731.779 kb on - strand at 4732.206 kb on + strand, within ABID97_RS22855 at 4732.207 kb on - strand, within ABID97_RS22855 at 4732.390 kb on - strand, within ABID97_RS22855 at 4732.587 kb on + strand, within ABID97_RS22855 at 4732.588 kb on - strand, within ABID97_RS22855 at 4732.663 kb on - strand, within ABID97_RS22855
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 4,730,305 + +0.3 4,730,530 - ABID97_RS22845 0.24 -1.5 4,730,544 + ABID97_RS22845 0.25 +1.4 4,730,820 + ABID97_RS22845 0.60 -1.2 4,730,883 + ABID97_RS22845 0.68 +0.0 4,730,884 - ABID97_RS22845 0.68 +0.2 4,730,884 - ABID97_RS22845 0.68 +1.8 4,731,445 + ABID97_RS22850 0.46 -1.8 4,731,446 - ABID97_RS22850 0.47 +1.0 4,731,446 - ABID97_RS22850 0.47 -0.8 4,731,724 + -0.3 4,731,779 - +1.0 4,732,206 + ABID97_RS22855 0.30 -0.2 4,732,207 - ABID97_RS22855 0.30 +0.1 4,732,390 - ABID97_RS22855 0.42 -1.1 4,732,587 + ABID97_RS22855 0.55 -0.4 4,732,588 - ABID97_RS22855 0.55 +0.1 4,732,663 - ABID97_RS22855 0.60 -1.2
Or see this region's nucleotide sequence